Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc32.103 Carica papaya HOM05D000003 ORTHO05D000004 3.1e-59 231.5 108 100.0
Cpa.g.sc3068.1 Carica papaya HOM05D000003 ORTHO05D000006 7.4e-21 104.0 77 63.6
Cpa.g.sc49.153 Carica papaya HOM05D000003 ORTHO05D000006 1.0e-17 93.6 73 60.3
Cpa.g.sc47.24 Carica papaya HOM05D000003 ORTHO05D016192 2.1e-15 85.9 80 47.5
Cpa.g.sc110.44 Carica papaya HOM05D000003 ORTHO05D000004 1.1e-13 80.1 60 56.7
QL03p058992 Quercus lobata HOM05D000003 ORTHO05D000004 3.3e-13 78.6 87 43.7
Aqoxy1G03439 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.7e-12 75.1 98 38.8
Cpa.g.sc10.69 Carica papaya HOM05D000003 ORTHO05D000006 1.8e-11 72.8 83 44.6
Cpa.g.sc88.65 Carica papaya HOM05D000003 ORTHO05D000006 1.8e-11 72.8 76 44.7
Cpa.g.sc110.25 Carica papaya HOM05D000003 ORTHO05D000006 5.3e-11 71.2 86 41.9
Aqoxy5G02498 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.2e-10 70.1 88 36.4
Aqoxy1G03337 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 2.0e-10 69.3 82 40.2
Aqoxy4G01370 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.6e-10 68.9 87 41.4
QL05p062582 Quercus lobata HOM05D000003 ORTHO05D000004 2.6e-10 68.9 84 41.7
Cpa.g.sc59.43 Carica papaya HOM05D004599 ORTHO05D005564 4.5e-10 68.2 63 49.2
Psat1g064040 Pisum sativum HOM05D000003 ORTHO05D000004 4.5e-10 68.2 82 36.6
Atru.chr2.3564 Acer truncatum HOM05D000003 ORTHO05D000004 5.9e-10 67.8 83 38.6
TPR.G1090 Trifolium pratense HOM05D000003 ORTHO05D000004 7.7e-10 67.4 96 36.5
HanXRQChr07g0206811 Helianthus annuus HOM05D000003 ORTHO05D000004 1.0e-09 67.0 85 40.0
QL04p042086 Quercus lobata HOM05D000003 ORTHO05D000006 1.0e-09 67.0 84 40.5
CSS0016554 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.7e-09 66.2 88 38.6
QL03p009188 Quercus lobata HOM05D000003 ORTHO05D000006 2.2e-09 65.9 87 34.5
Atru.chr1.2408 Acer truncatum HOM05D000003 ORTHO05D000004 3.8e-09 65.1 80 40.0
Cpa.g.sc17.59 Carica papaya HOM05D000003 ORTHO05D000006 3.8e-09 65.1 82 42.7
HanXRQChr13g0401811 Helianthus annuus HOM05D000003 ORTHO05D000004 3.8e-09 65.1 94 39.4
QL02p033301 Quercus lobata HOM05D000003 ORTHO05D000004 3.8e-09 65.1 84 41.7
PGSC0003DMG400014363 Solanum tuberosum HOM05D000003 ORTHO05D000004 5.0e-09 64.7 82 34.1
Atru.chr1.3207 Acer truncatum HOM05D000003 ORTHO05D000004 6.5e-09 64.3 80 38.8
Atru.chr2.915 Acer truncatum HOM05D000003 ORTHO05D000004 6.5e-09 64.3 83 39.8
TAR549G0007 Trochodendron aralioides HOM05D000003 ORTHO05D000004 6.5e-09 64.3 80 38.8
Aqoxy4G01058 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 8.5e-09 63.9 101 32.7
CSS0008242 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.5e-09 63.9 85 37.6
CiPaw.06G025000 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.1e-08 63.5 95 35.8
Hund20763 Selenicereus undatus HOM05D001165 ORTHO05D010360 1.1e-08 63.5 74 39.2
Atru.chr1.3974 Acer truncatum HOM05D000003 ORTHO05D000004 1.5e-08 63.2 80 38.8
Cpa.g.sc807.1 Carica papaya HOM05D000003 ORTHO05D000006 1.5e-08 63.2 64 50.0
MBI05_g34746_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 1.5e-08 63.2 82 36.6
QL06p003549 Quercus lobata HOM05D004938 ORTHO05D006035 1.5e-08 63.2 85 36.5
Atru.chr1.2846 Acer truncatum HOM05D000003 ORTHO05D000004 1.9e-08 62.8 93 35.5
Aqoxy7G01438 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.9e-08 62.8 86 37.2
CSS0015394 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.9e-08 62.8 81 39.5
PSO170G4719 Papaver somniferum HOM05D000003 ORTHO05D000006 1.9e-08 62.8 84 31.0
TPR.G22798 Trifolium pratense HOM05D000003 ORTHO05D000006 1.9e-08 62.8 91 34.1
TPR.G22952 Trifolium pratense HOM05D000003 ORTHO05D000004 1.9e-08 62.8 96 32.3
TPR.G7506 Trifolium pratense HOM05D000003 ORTHO05D000004 1.9e-08 62.8 80 35.0
Aqoxy1G02399 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.5e-08 62.4 83 34.9
HanXRQChr15g0497301 Helianthus annuus HOM05D000003 ORTHO05D000004 2.5e-08 62.4 87 39.1
PSO675G4427 Papaver somniferum HOM05D000003 ORTHO05D000006 2.5e-08 62.4 83 31.3
TPR.G40650 Trifolium pratense HOM05D000003 ORTHO05D000004 2.5e-08 62.4 84 33.3
Atru.chr2.3295 Acer truncatum HOM05D000003 ORTHO05D000004 3.2e-08 62.0 80 38.8
Atru.chr4.2769 Acer truncatum HOM05D000003 ORTHO05D000004 3.2e-08 62.0 86 36.0
QL06p028459 Quercus lobata HOM05D000003 ORTHO05D000004 3.2e-08 62.0 94 35.1
Atru.chr10.907 Acer truncatum HOM05D000003 ORTHO05D000004 4.2e-08 61.6 80 40.0
Atru.chr3.3701 Acer truncatum HOM05D000003 ORTHO05D000004 4.2e-08 61.6 83 37.3
Cpa.g.sc110.41 Carica papaya HOM05D000003 ORTHO05D000006 4.2e-08 61.6 77 36.4
Cpa.g.sc17.126 Carica papaya HOM05D000003 ORTHO05D000006 4.2e-08 61.6 74 40.5
MBI01_g09963_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 4.2e-08 61.6 82 36.6
Oeu038378.2 Olea europaea HOM05D000003 ORTHO05D001174 4.2e-08 61.6 95 32.6
CSS0030478 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 5.5e-08 61.2 81 39.5
QL01p048324 Quercus lobata HOM05D002615 ORTHO05D002913 5.5e-08 61.2 88 36.4
CSS0013840 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 7.2e-08 60.8 81 39.5
HanXRQChr01g0027891 Helianthus annuus HOM05D000003 ORTHO05D000004 7.2e-08 60.8 81 35.8
HanXRQChr02g0037941 Helianthus annuus HOM05D000003 ORTHO05D000004 7.2e-08 60.8 83 38.6
QL01p030568 Quercus lobata HOM05D000003 ORTHO05D000006 7.2e-08 60.8 87 34.5
QL10p002852 Quercus lobata HOM05D000003 ORTHO05D000004 7.2e-08 60.8 88 36.4
PGSC0003DMG400015955 Solanum tuberosum HOM05D000003 ORTHO05D000006 7.2e-08 60.8 87 29.9
TPR.G32401 Trifolium pratense HOM05D000003 ORTHO05D000004 7.2e-08 60.8 82 32.9
Atru.chr2.258 Acer truncatum HOM05D000003 ORTHO05D000004 9.4e-08 60.5 80 35.0
Atru.chr4.3084 Acer truncatum HOM05D000003 ORTHO05D000004 9.4e-08 60.5 80 35.0
Cpa.g.sc87.1 Carica papaya HOM05D000003 ORTHO05D000006 9.4e-08 60.5 72 44.4
Atru.chr10.1687 Acer truncatum HOM05D000003 ORTHO05D000004 1.2e-07 60.1 75 33.3
Aqoxy2G01971 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.2e-07 60.1 87 34.5
Aqoxy3G01815 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.2e-07 60.1 82 31.7
HanXRQChr05g0162321 Helianthus annuus HOM05D000003 ORTHO05D000004 1.2e-07 60.1 80 40.0
HanXRQChr11g0345661 Helianthus annuus HOM05D000003 ORTHO05D000004 1.2e-07 60.1 80 40.0
HanXRQChr15g0473391 Helianthus annuus HOM05D000003 ORTHO05D000004 1.2e-07 60.1 80 40.0
QL01p051842 Quercus lobata HOM05D001571 ORTHO05D002889 1.2e-07 60.1 74 40.5
Atru.chr3.1893 Acer truncatum HOM05D000003 ORTHO05D000004 1.6e-07 59.7 83 33.7
Atru.chr8.612 Acer truncatum HOM05D000003 ORTHO05D000004 1.6e-07 59.7 80 38.8
Aqoxy2G01461 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.6e-07 59.7 84 35.7
Aqoxy7G01789 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.6e-07 59.7 83 37.3
CSS0020053 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.6e-07 59.7 85 37.6
Psat2g122120 Pisum sativum HOM05D007807 ORTHO05D001516 1.6e-07 59.7 89 39.3
QL05p086823 Quercus lobata HOM05D000003 ORTHO05D000004 1.6e-07 59.7 84 36.9
QL12p026404 Quercus lobata HOM05D000003 ORTHO05D000004 1.6e-07 59.7 84 36.9
TAR549G0002 Trochodendron aralioides HOM05D000003 ORTHO05D000004 1.6e-07 59.7 95 34.7
PSO782G4741 Papaver somniferum HOM05D000003 ORTHO05D000004 2.1e-07 59.3 74 35.1
TPR.G7348 Trifolium pratense HOM05D000003 ORTHO05D000004 2.1e-07 59.3 91 33.0
CSS0036784 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.7e-07 58.9 84 40.5
Cpa.g.sc32.112 Carica papaya HOM05D020105 ORTHO05D016192 2.7e-07 58.9 74 37.8
TPR.G18505 Trifolium pratense HOM05D000003 ORTHO05D000004 2.7e-07 58.9 82 31.7
Atru.chr2.1981 Acer truncatum HOM05D000003 ORTHO05D000004 3.6e-07 58.5 80 37.5
Atru.chr6.1051 Acer truncatum HOM05D000003 ORTHO05D000004 3.6e-07 58.5 82 32.9
Aqoxy1G02903 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.6e-07 58.5 108 30.6
Aqoxy2G01405 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.6e-07 58.5 83 33.7
Aqoxy2G01414 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.6e-07 58.5 83 33.7
HanXRQChr13g0387241 Helianthus annuus HOM05D000003 ORTHO05D000004 3.6e-07 58.5 87 36.8
MBI09_g13294_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.6e-07 58.5 83 33.7
PSO675G6557 Papaver somniferum HOM05D000003 ORTHO05D000006 3.6e-07 58.5 84 28.6
Psat6g163040 Pisum sativum HOM05D000003 ORTHO05D000004 3.6e-07 58.5 89 38.2
Aqoxy5G02950 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.7e-07 58.2 84 34.5
CSS0039300 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 4.7e-07 58.2 82 39.0
ECA238G1736 Erigeron canadensis HOM05D000043 ORTHO05D000004 4.7e-07 58.2 84 33.3
PSO017G4088 Papaver somniferum HOM05D000003 ORTHO05D000006 4.7e-07 58.2 84 29.8
PSO423G0219 Papaver somniferum HOM05D000003 ORTHO05D000006 4.7e-07 58.2 84 32.1
Psat0s1204g0040 Pisum sativum HOM05D007807 ORTHO05D001516 4.7e-07 58.2 89 38.2
Psat0s3434g0160 Pisum sativum HOM05D007807 ORTHO05D001516 4.7e-07 58.2 89 38.2
Psat0ss2562g0120 Pisum sativum HOM05D007807 ORTHO05D001516 4.7e-07 58.2 89 38.2
Psat3g133760 Pisum sativum HOM05D000003 ORTHO05D000004 4.7e-07 58.2 89 38.2
QL04p090352 Quercus lobata HOM05D000003 ORTHO05D000004 4.7e-07 58.2 84 35.7
QL05p026285 Quercus lobata HOM05D000003 ORTHO05D000004 4.7e-07 58.2 75 36.0
QL11p030734 Quercus lobata HOM05D000969 ORTHO05D000899 4.7e-07 58.2 84 35.7
PGSC0003DMG400033900 Solanum tuberosum HOM05D000003 ORTHO05D000004 4.7e-07 58.2 78 35.9
PSO724G0020 Papaver somniferum HOM05D000003 ORTHO05D000004 6.1e-07 57.8 95 30.5
CSS0006262 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.0e-07 57.4 85 37.6
ECA233G0876 Erigeron canadensis HOM05D000003 ORTHO05D000004 8.0e-07 57.4 83 36.1
ECA234G4528 Erigeron canadensis HOM05D000003 ORTHO05D000004 8.0e-07 57.4 84 35.7
QL02p036395 Quercus lobata HOM05D000003 ORTHO05D000004 8.0e-07 57.4 83 38.6
PGSC0003DMG400027571 Solanum tuberosum HOM05D000003 ORTHO05D000004 8.0e-07 57.4 74 37.8
Atru.chr2.2547 Acer truncatum HOM05D000003 ORTHO05D000004 1.0e-06 57.0 80 31.2
Atru.chr3.3329 Acer truncatum HOM05D000003 ORTHO05D002259 1.0e-06 57.0 61 45.9
Atru.chr6.509 Acer truncatum HOM05D000003 ORTHO05D000004 1.0e-06 57.0 79 35.4
Aqoxy1G03403 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.0e-06 57.0 66 40.9
ECA238G3311 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.0e-06 57.0 83 37.3
Psat4g225800 Pisum sativum HOM05D007807 ORTHO05D001516 1.0e-06 57.0 89 38.2
QL06p035637 Quercus lobata HOM05D000141 ORTHO05D004993 1.0e-06 57.0 84 35.7
TAR535G0003 Trochodendron aralioides HOM05D000003 ORTHO05D000006 1.0e-06 57.0 91 37.4
Atru.chr1.3706 Acer truncatum HOM05D000003 ORTHO05D000004 1.4e-06 56.6 82 34.1
Atru.chr2.3068 Acer truncatum HOM05D000003 ORTHO05D000004 1.4e-06 56.6 81 32.1
Aqoxy2G00310 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.4e-06 56.6 94 27.7
Aqoxy3G01370 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.4e-06 56.6 73 41.1
Aqoxy4G01302 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.4e-06 56.6 94 27.7
CSS0001040 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.4e-06 56.6 88 36.4
CAN.G1310.16 Capsicum annuum HOM05D000003 ORTHO05D000004 1.4e-06 56.6 87 25.3
ECA236G3434 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.4e-06 56.6 84 33.3
HanXRQChr04g0113211 Helianthus annuus HOM05D000003 ORTHO05D000004 1.4e-06 56.6 79 38.0
MBI10_g39121_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D013091 1.4e-06 56.6 64 43.8
PSO541G0105 Papaver somniferum HOM05D000003 ORTHO05D000004 1.4e-06 56.6 75 32.0
PSO729G0214 Papaver somniferum HOM05D000003 ORTHO05D000004 1.4e-06 56.6 84 31.0
TAR548G0001 Trochodendron aralioides HOM05D000003 ORTHO05D000004 1.4e-06 56.6 88 35.2
Atru.chr2.2565 Acer truncatum HOM05D000003 ORTHO05D000004 1.8e-06 56.2 83 33.7
Aqoxy3G01412 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.8e-06 56.2 84 32.1
CSS0003615 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.8e-06 56.2 79 38.0
ECA247G1344 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.8e-06 56.2 89 36.0
HanXRQChr08g0217951 Helianthus annuus HOM05D000003 ORTHO05D000004 1.8e-06 56.2 67 38.8
HanXRQChr09g0246731 Helianthus annuus HOM05D000003 ORTHO05D000004 1.8e-06 56.2 66 43.9
PSO063G5867 Papaver somniferum HOM05D000003 ORTHO05D000004 1.8e-06 56.2 84 29.8
PSO210G2794 Papaver somniferum HOM05D000003 ORTHO05D000004 1.8e-06 56.2 82 30.5
CSS0010630 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.3e-06 55.8 81 38.3
CSS0011681 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.3e-06 55.8 88 33.0
HanXRQChr17g0535871 Helianthus annuus HOM05D000003 ORTHO05D000004 2.3e-06 55.8 67 37.3
MBI05_g04844_MAGBIO Magnolia biondii HOM05D004539 ORTHO05D005482 2.3e-06 55.8 54 48.1
MBI10_g15974_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.3e-06 55.8 70 38.6
PGSC0003DMG400032795 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.3e-06 55.8 98 29.6
CANSAT11G2262 Cannabis sativa HOM05D000003 ORTHO05D000006 3.0e-06 55.5 82 30.5
CAN.G2059.1 Capsicum annuum HOM05D001902 ORTHO05D001973 3.0e-06 55.5 80 32.5
CAN.G370.38 Capsicum annuum HOM05D001902 ORTHO05D001973 3.0e-06 55.5 80 32.5
PSO339G1835 Papaver somniferum HOM05D000003 ORTHO05D000004 3.0e-06 55.5 76 30.3
Aqoxy6G02514 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.0e-06 55.1 75 37.3
CSS0011287 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.0e-06 55.1 83 39.8
CSS0019468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.0e-06 55.1 85 34.1
ECA247G3056 Erigeron canadensis HOM05D000003 ORTHO05D000004 4.0e-06 55.1 84 32.1
HanXRQChr05g0148651 Helianthus annuus HOM05D000003 ORTHO05D000004 4.0e-06 55.1 87 35.6
HanXRQChr17g0550341 Helianthus annuus HOM05D000003 ORTHO05D000004 4.0e-06 55.1 98 31.6
QL02p047771 Quercus lobata HOM05D000003 ORTHO05D000006 4.0e-06 55.1 56 44.6
TPR.G27786 Trifolium pratense HOM05D000003 ORTHO05D000004 4.0e-06 55.1 80 32.5
Aqoxy1G03267 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.2e-06 54.7 87 31.0
CSS0028435 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.2e-06 54.7 85 35.3
HanXRQChr12g0376001 Helianthus annuus HOM05D000003 ORTHO05D000004 5.2e-06 54.7 80 35.0
MBI10_g05856_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 5.2e-06 54.7 72 41.7
Oeu036043.1 Olea europaea HOM05D000003 ORTHO05D000004 5.2e-06 54.7 63 39.7
PSO063G5349 Papaver somniferum HOM05D000003 ORTHO05D000004 5.2e-06 54.7 101 30.7
PSO513G0078 Papaver somniferum HOM05D000003 ORTHO05D000006 5.2e-06 54.7 84 29.8
Atru.chr6.365 Acer truncatum HOM05D000003 ORTHO05D000004 6.7e-06 54.3 80 32.5
CSS0014107 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.7e-06 54.3 85 34.1
MBI09_g09410_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 6.7e-06 54.3 76 34.2
PSO198G0072 Papaver somniferum HOM05D000003 ORTHO05D000006 6.7e-06 54.3 87 27.6
PSO384G1525 Papaver somniferum HOM05D000003 ORTHO05D000004 6.7e-06 54.3 84 31.0
QL02p038779 Quercus lobata HOM05D000803 ORTHO05D007008 6.7e-06 54.3 110 31.8
SEGI_04129 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 6.7e-06 54.3 97 37.1
TPR.G40714 Trifolium pratense HOM05D000003 ORTHO05D000004 6.7e-06 54.3 80 32.5
HanXRQChr09g0272141 Helianthus annuus HOM05D000003 ORTHO05D000004 8.8e-06 53.9 73 35.6
MBI06_g21007_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 8.8e-06 53.9 63 42.9
PSO063G6480 Papaver somniferum HOM05D000003 ORTHO05D000004 8.8e-06 53.9 98 30.6
PSO675G3943 Papaver somniferum HOM05D000003 ORTHO05D000004 8.8e-06 53.9 89 29.2


User provided reference genes

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