Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc312.1 Carica papaya HOM05D006895 ORTHO05D008605 1.1e-80 303.5 181 100.0
Migut.O00943 Erythranthe guttata HOM05D006895 ORTHO05D008605 1.2e-47 193.7 163 58.3
Haze_20748 Corylus avellana HOM05D006895 ORTHO05D008605 1.3e-41 173.7 145 61.4
Ca_09611_v3 Cicer arietinum L. HOM05D006895 ORTHO05D008605 7.8e-39 164.5 148 58.8
Atru.chr8.1949 Acer truncatum HOM05D006895 ORTHO05D008605 4.4e-34 148.7 120 62.5
Carub.0005s2028 Capsella rubella HOM05D006895 ORTHO05D008605 6.4e-33 144.8 136 55.1
Medtr1g068960 Medicago truncatula HOM05D006895 ORTHO05D008605 4.1e-32 142.1 130 56.2
HanXRQChr01g0026741 Helianthus annuus HOM05D006895 ORTHO05D008605 5.4e-32 141.7 146 47.3
Actinidia13132 Actinidia chinensis HOM05D006895 ORTHO05D008605 1.2e-31 140.6 153 51.6
Atru.BG.222.p Acer truncatum HOM05D006895 ORTHO05D008605 2.0e-31 139.8 116 61.2
AL5G34670 Arabidopsis lyrata HOM05D006895 ORTHO05D008605 1.3e-30 137.1 131 54.2
AT3G53700 Arabidopsis thaliana HOM05D006895 ORTHO05D008605 1.3e-30 137.1 132 53.8
CARHR163610 Cardamine hirsuta HOM05D006895 ORTHO05D008605 6.6e-30 134.8 131 53.4
Lsat_1_v5_gn_1_55640 Lactuca sativa HOM05D006895 ORTHO05D008605 1.1e-29 134.0 149 61.7
CsaV3_4G024770 Cucumis sativus L. HOM05D006895 ORTHO05D008605 1.5e-29 133.7 119 57.1
Thhalv10010142m.g Eutrema salsugineum HOM05D006895 ORTHO05D008605 1.9e-29 133.3 129 53.5
Cfa017422 Carpinus fangiana HOM05D006895 ORTHO05D008605 3.3e-29 132.5 120 77.5
Sp5g08680 Schrenkiella parvula HOM05D006895 ORTHO05D008605 3.3e-29 132.5 129 53.5
CiPaw.10G143400 Carya illinoinensis HOM05D006895 ORTHO05D008605 5.6e-29 131.7 115 76.5
Gohir.D04G119700 Gossypium hirsutum HOM05D006895 ORTHO05D008605 5.6e-29 131.7 118 76.3
Gorai.012G101800 Gossypium raimondii HOM05D006895 ORTHO05D008605 5.6e-29 131.7 118 76.3
FvH4_6g14250 Fragaria vesca HOM05D006895 ORTHO05D008605 7.3e-29 131.3 110 75.5
FAN14G2414 Fragaria x ananassa HOM05D006895 ORTHO05D008605 7.3e-29 131.3 110 75.5
FAN09G2819 Fragaria x ananassa HOM05D006895 ORTHO05D008605 1.2e-28 130.6 110 74.5
ClCG04G008380 Citrullus lanatus HOM05D006895 ORTHO05D008605 1.6e-28 130.2 117 76.1
FAN05G0539 Fragaria x ananassa HOM05D006895 ORTHO05D008605 1.6e-28 130.2 110 74.5
Gohir.A04G081000 Gossypium hirsutum HOM05D006895 ORTHO05D008605 2.8e-28 129.4 116 75.0
MELO3C003111.2 Cucumis melo HOM05D006895 ORTHO05D008605 3.6e-28 129.0 120 56.7
RcHm_v2.0_Chr3g0467211 Rosa chinensis HOM05D006895 ORTHO05D008605 4.7e-28 128.6 115 60.9
Rhsim04G0155800 Rhododendron simsii HOM05D006895 ORTHO05D008605 1.4e-27 127.1 121 53.7
Aa31LG10G9340 Aethionema arabicum HOM05D006895 ORTHO05D008605 1.8e-27 126.7 118 61.0
Sed0013405 Sechium edule HOM05D006895 ORTHO05D008605 2.3e-27 126.3 117 74.4
Aqoxy3G03023 Aquilegia oxysepala HOM05D006895 ORTHO05D008605 3.1e-27 125.9 116 53.4
C04p38850 Brassica napus HOM05D006895 ORTHO05D008605 4.0e-27 125.6 126 50.8
BcaC02g09140 Brassica carinata HOM05D006895 ORTHO05D008605 5.2e-27 125.2 126 50.8
Thecc.05G043800 Theobroma cacao HOM05D006895 ORTHO05D008605 5.2e-27 125.2 115 75.7
BcaB02g08515 Brassica carinata HOM05D006895 ORTHO05D008605 6.8e-27 124.8 126 50.8
BraA04t16297Z Brassica rapa HOM05D006895 ORTHO05D008605 8.9e-27 124.4 126 50.0
Psat6g065920 Pisum sativum HOM05D006895 ORTHO05D008605 1.2e-26 124.0 116 54.3
Potri.004G013300 Populus trichocarpa HOM05D006895 ORTHO05D008605 1.2e-26 124.0 116 55.2
A04p05930 Brassica napus HOM05D006895 ORTHO05D008605 1.5e-26 123.6 126 50.0
CSS0020348 Camellia sinensis var. sinensis HOM05D006895 ORTHO05D008605 2.0e-26 123.2 108 78.7
PSO648G0005 Papaver somniferum HOM05D006895 ORTHO05D008605 2.0e-26 123.2 114 53.5
CSS0025676 Camellia sinensis var. sinensis HOM05D006895 ORTHO05D008605 3.4e-26 122.5 108 78.7
BolC4t25457H Brassica oleracea HOM05D006895 ORTHO05D008605 7.5e-26 121.3 123 50.4
PSO339G3203 Papaver somniferum HOM05D006895 ORTHO05D008605 7.5e-26 121.3 114 54.4
COL.COLO4_14849 Corchorus olitorius HOM05D001886 ORTHO05D005666 9.8e-26 120.9 103 61.2
QL07p047413 Quercus lobata HOM05D006895 ORTHO05D008605 9.8e-26 120.9 102 81.4
EL10Ac8g18760 Beta vulgaris HOM05D006895 ORTHO05D008605 1.3e-25 120.6 118 69.5
Actinidia05301 Actinidia chinensis HOM05D006895 ORTHO05D008605 1.7e-25 120.2 106 68.9
Ciclev10013605m.g Citrus clementina HOM05D006895 ORTHO05D008605 2.2e-25 119.8 118 52.5
THA.LOC104806571 Tarenaya hassleriana HOM05D006895 ORTHO05D008605 2.2e-25 119.8 119 49.6
QL05p010620 Quercus lobata HOM05D006895 ORTHO05D008605 3.7e-25 119.0 102 80.4
Lj2C99T13 Lonicera japonica HOM05D006895 ORTHO05D008605 4.9e-25 118.6 111 73.0
Dinv35630 Davidia involucrata HOM05D006895 ORTHO05D008605 6.4e-25 118.2 107 80.4
Psat6g065880 Pisum sativum HOM05D006895 ORTHO05D008605 8.3e-25 117.9 121 67.8
Prupe.6G250800 Prunus persica HOM05D006895 ORTHO05D008605 8.3e-25 117.9 105 60.0
TWI77G0080 Tripterygium wilfordii HOM05D006895 ORTHO05D008605 1.1e-24 117.5 107 73.8
TPR.G30959 Trifolium pratense HOM05D006895 ORTHO05D008605 1.9e-24 116.7 114 69.3
PGSC0003DMG400008927 Solanum tuberosum HOM05D006895 ORTHO05D008605 2.4e-24 116.3 117 53.0
TAR636G1679 Trochodendron aralioides HOM05D006895 ORTHO05D008605 2.4e-24 116.3 113 74.3
Ah.09g224140 Amaranthus hybridus HOM05D006895 ORTHO05D008605 3.2e-24 115.9 116 69.8
Eucgr.K03156 Eucalyptus grandis HOM05D006895 ORTHO05D008605 3.2e-24 115.9 108 55.6
Sc01g0004190 Simmondsia chinensis HOM05D006895 ORTHO05D008605 3.2e-24 115.9 111 52.3
Solyc09g010450.1 Solanum lycopersicum HOM05D006895 ORTHO05D008605 3.2e-24 115.9 117 53.0
Nitab4.5_0002077g0070 Nicotiana tabacum HOM05D006895 ORTHO05D008605 4.1e-24 115.5 117 53.0
AUR62020014 Chenopodium quinoa HOM05D006895 ORTHO05D008605 7.0e-24 114.8 115 51.3
Manes.08G078400 Manihot esculenta HOM05D006895 ORTHO05D008605 7.0e-24 114.8 116 53.4
Oeu049215.1 Olea europaea HOM05D006895 ORTHO05D008605 7.0e-24 114.8 114 51.8
Rhsim04G0155700 Rhododendron simsii HOM05D006895 ORTHO05D008605 9.2e-24 114.4 107 53.3
Sopen09g005190 Solanum pennellii HOM05D006895 ORTHO05D008605 9.2e-24 114.4 116 52.6
Migut.J00352 Erythranthe guttata HOM05D006895 ORTHO05D008605 1.6e-23 113.6 114 47.4
MD12G1138900 Malus domestica HOM05D006895 ORTHO05D008605 1.6e-23 113.6 102 58.8
Nitab4.5_0003267g0080 Nicotiana tabacum HOM05D006895 ORTHO05D008605 1.6e-23 113.6 117 53.0
CANSAT80G0660 Cannabis sativa HOM05D006895 ORTHO05D008605 6.0e-23 111.7 113 73.5
Lj5g0004082 Lotus japonicus HOM05D006895 ORTHO05D008605 7.8e-23 111.3 114 71.9
Nn8g40743 Nelumbo nucifera HOM05D006895 ORTHO05D008605 2.3e-22 109.8 107 72.9
SalBow3G1315 Salvia bowleyana HOM05D006895 ORTHO05D008605 2.3e-22 109.8 115 67.8
DCAR_009247 Daucus carota HOM05D006895 ORTHO05D008605 3.0e-22 109.4 107 72.0
CAN.G97.15 Capsicum annuum HOM05D006895 ORTHO05D008605 5.1e-22 108.6 113 53.1
Glyma.13G131600 Glycine max HOM05D006895 ORTHO05D008605 6.6e-22 108.2 105 73.3
MBI14_g24311_MAGBIO Magnolia biondii HOM05D006895 ORTHO05D008605 9.5e-21 104.4 103 70.9
MSTRG.5682 Avicennia marina HOM05D006895 ORTHO05D008605 2.8e-20 102.8 114 65.8
ECA248G3443 Erigeron canadensis HOM05D006895 ORTHO05D008605 2.8e-20 102.8 113 63.7
PGR004G1128 Punica granatum HOM05D006895 ORTHO05D008605 4.7e-20 102.1 97 75.3
Cc06_g02910 Coffea canephora HOM05D006895 ORTHO05D008605 8.1e-20 101.3 106 72.6
vmacro08665 Vaccinium macrocarpon HOM05D006895 ORTHO05D008605 8.1e-20 101.3 107 50.5
Phvul.007G157700 Phaseolus vulgaris HOM05D006895 ORTHO05D008605 1.8e-19 100.1 105 66.7
VMungo0720G1504 Vigna mungo HOM05D006895 ORTHO05D008605 3.1e-19 99.4 105 66.7
TAR633G1621 Trochodendron aralioides HOM05D006895 ORTHO05D008605 5.2e-19 98.6 106 71.7
Lalb_Chr02g0153051 Lupinus albus HOM05D006895 ORTHO05D008605 4.4e-18 95.5 98 70.4
SGA_v2.0_scaffold126G33815 Striga asiatica HOM05D006895 ORTHO05D008605 1.3e-17 94.0 101 59.4
Rhsim04G0155500 Rhododendron simsii HOM05D006895 ORTHO05D008605 6.4e-17 91.7 107 43.9
Rhsim04G0155400 Rhododendron simsii HOM05D006895 ORTHO05D008605 2.4e-16 89.7 105 42.9
ATR0559G329 Amborella trichopoda HOM05D006895 ORTHO05D008605 1.6e-15 87.0 102 62.7
Duzib128G0849 Durio zibethinus HOM05D006895 ORTHO05D008605 3.5e-15 85.9 120 43.3
GSVIVG01025524001 Vitis vinifera HOM05D006895 ORTHO05D008605 4.6e-15 85.5 59 71.2
CDE04G3188 Ceratophyllum demersum HOM05D006895 ORTHO05D008605 1.1e-13 80.9 94 61.7
Zm00001eb043060 Zea mays HOM05D006895 ORTHO05D008605 1.5e-13 80.5 100 44.0
SGA_v2.0_scaffold126G33817 Striga asiatica HOM05D006895 ORTHO05D008605 4.3e-13 79.0 98 42.9
Os03g0597200 Oryza sativa ssp. japonica HOM05D006895 ORTHO05D008605 2.1e-12 76.6 100 42.0
Rhsim04G0155600 Rhododendron simsii HOM05D006895 ORTHO05D008605 3.1e-11 72.8 100 41.0
Sabra04G0006200 Salix brachista HOM05D006895 ORTHO05D008605 1.2e-10 70.9 87 42.5
RcHm_v2.0_Chr5g0078541 Rosa chinensis HOM05D009346 ORTHO05D012019 1.2e-07 60.8 86 36.0
ECA234G1654 Erigeron canadensis HOM05D000162 ORTHO05D000090 6.0e-07 58.5 97 37.1
SMO364G0438 Selaginella moellendorffii HOM05D000855 ORTHO05D008530 1.3e-06 57.4 90 33.3
MD15G1265700 Malus domestica HOM05D000891 ORTHO05D000761 3.0e-06 56.2 77 36.4
TWI81G0227 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 3.0e-06 56.2 85 40.0
COL.COLO4_05681 Corchorus olitorius HOM05D006740 ORTHO05D008571 5.1e-06 55.5 101 38.6
Nitab4.5_0000628g0030 Nicotiana tabacum HOM05D000891 ORTHO05D000761 5.1e-06 55.5 90 32.2
Psat1g151920 Pisum sativum HOM05D006740 ORTHO05D008571 5.1e-06 55.5 92 37.0
Sabra11G0003600 Salix brachista HOM05D001191 ORTHO05D000979 5.1e-06 55.5 140 32.1
Thecc.01G038900 Theobroma cacao HOM05D000891 ORTHO05D000761 5.1e-06 55.5 88 33.0
TPR.G37863 Trifolium pratense HOM05D006740 ORTHO05D008571 5.1e-06 55.5 92 38.0
CiPaw.01G035200 Carya illinoinensis HOM05D000891 ORTHO05D000761 6.6e-06 55.1 96 30.2
Lj2C43T6 Lonicera japonica HOM05D017878 ORTHO05D018225 6.6e-06 55.1 84 34.5
Lalb_Chr07g0187591 Lupinus albus HOM05D006740 ORTHO05D008571 6.6e-06 55.1 92 38.0
PGR119G1317 Punica granatum HOM05D000891 ORTHO05D000761 6.6e-06 55.1 77 36.4
SHI20606 Sapria himalayana HOM05D006819 ORTHO05D008763 6.6e-06 55.1 87 36.8
Os01g0908800 Oryza sativa ssp. japonica HOM05D006980 ORTHO05D008704 8.7e-06 54.7 96 29.2


User provided reference genes

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