Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc3028.1 Carica papaya HOM05D000002 ORTHO05D028561 7.0e-29 129.8 60 100.0
CSS0002445 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.0e-20 100.1 56 76.8
CSS0013767 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.0e-20 100.1 56 78.6
CSS0021782 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-19 99.0 56 75.0
CSS0014458 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.9e-19 97.4 59 74.6
CSS0049957 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.0e-19 97.1 59 74.6
RcHm_v2.0_Chr3g0450981 Rosa chinensis HOM05D000002 ORTHO05D000047 1.6e-17 92.0 59 69.5
Manes.10G076601 Manihot esculenta HOM05D000002 ORTHO05D000047 6.2e-17 90.1 60 63.3
Hma1.2p1_1543F.1_g289840 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.3e-16 88.2 55 69.1
Hma1.2p1_0281F.1_g113140 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.1e-16 87.8 57 70.2
Manes.13G071301 Manihot esculenta HOM05D000002 ORTHO05D000047 1.1e-13 79.3 59 59.3
Manes.13G089634 Manihot esculenta HOM05D000002 ORTHO05D000047 4.6e-12 73.9 49 63.3
FvH4_5g32571 Fragaria vesca HOM05D000002 ORTHO05D000047 2.3e-11 71.6 59 52.5
Manes.05G004600 Manihot esculenta HOM05D000002 ORTHO05D000047 2.3e-11 71.6 51 60.8
RcHm_v2.0_Chr2g0117261 Rosa chinensis HOM05D000002 ORTHO05D000047 3.9e-11 70.9 59 50.8
SHI13997 Sapria himalayana HOM05D000174 ORTHO05D000001 5.1e-11 70.5 51 60.8
FvH4_4g33921 Fragaria vesca HOM05D000002 ORTHO05D000047 8.6e-11 69.7 59 49.2
SHI18185 Sapria himalayana HOM05D022428 ORTHO05D028561 1.5e-10 68.9 53 54.7
Ciclev10024522m.g Citrus clementina HOM05D000002 ORTHO05D000047 2.5e-10 68.2 59 45.8
Manes.03G152001 Manihot esculenta HOM05D000002 ORTHO05D000047 2.5e-10 68.2 51 60.8
Manes.04G101050 Manihot esculenta HOM05D000002 ORTHO05D000047 3.3e-10 67.8 47 59.6
PSO210G3997 Papaver somniferum HOM05D000002 ORTHO05D000001 5.6e-10 67.0 60 45.0
PSO675G8013 Papaver somniferum HOM05D000002 ORTHO05D000047 5.6e-10 67.0 59 47.5
Sabra04G0106200 Salix brachista HOM05D000002 ORTHO05D000047 5.6e-10 67.0 59 45.8
Sabra06G0157700 Salix brachista HOM05D000002 ORTHO05D000047 5.6e-10 67.0 59 45.8
TWI60G0096 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 7.3e-10 66.6 59 45.8
TWI63G0021 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 7.3e-10 66.6 59 45.8
Eucgr.K01505 Eucalyptus grandis HOM05D000002 ORTHO05D000047 1.2e-09 65.9 59 44.1
Hma1.2p1_0017F.1_g011450 Hydrangea macrophylla HOM05D000149 ORTHO05D000047 1.6e-09 65.5 59 45.8
Sabra15G0060700 Salix brachista HOM05D000002 ORTHO05D000047 1.6e-09 65.5 59 44.1
Sabra16G0313700 Salix brachista HOM05D000002 ORTHO05D000047 1.6e-09 65.5 59 44.1
Sabra19G0016100 Salix brachista HOM05D000002 ORTHO05D000047 1.6e-09 65.5 59 44.1
Sabra19G0019600 Salix brachista HOM05D000002 ORTHO05D000047 1.6e-09 65.5 59 44.1
Thhalv10029155m.g Eutrema salsugineum HOM05D000002 ORTHO05D000047 2.1e-09 65.1 59 47.5
Sabra05G0034800 Salix brachista HOM05D000002 ORTHO05D000047 2.1e-09 65.1 59 49.2
Sabra09G0051700 Salix brachista HOM05D000002 ORTHO05D000047 2.1e-09 65.1 59 49.2
Sabra10G0088600 Salix brachista HOM05D000002 ORTHO05D000047 2.1e-09 65.1 59 49.2
Sabra11G0023800 Salix brachista HOM05D000002 ORTHO05D000047 2.1e-09 65.1 59 49.2
Hma1.2p1_0253F.1_g102890 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.7e-09 63.9 59 47.5
Psat5g063200 Pisum sativum HOM05D000002 ORTHO05D000047 4.7e-09 63.9 59 44.1
QL02p068655 Quercus lobata HOM05D000002 ORTHO05D000047 4.7e-09 63.9 59 44.1
TAR406G0010 Trochodendron aralioides HOM05D000002 ORTHO05D000047 4.7e-09 63.9 59 44.1
SEGI_21402 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 8.1e-09 63.2 59 44.1
Cpa.g.sc1217.1 Carica papaya HOM05D000002 ORTHO05D000047 1.1e-08 62.8 59 40.7
Rhsim12G0116200 Rhododendron simsii HOM05D000002 ORTHO05D000047 1.1e-08 62.8 59 44.1
Hma1.2p1_1591F.1_g292490 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.4e-08 62.4 59 44.1
Psat0s3208g0080 Pisum sativum HOM05D000002 ORTHO05D000047 1.4e-08 62.4 59 42.4
SEGI_08695 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.4e-08 62.4 59 44.1
SEGI_08785 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.4e-08 62.4 59 44.1
TPR.G14913 Trifolium pratense HOM05D000002 ORTHO05D000047 1.8e-08 62.0 59 44.1
FvH4_1g25961 Fragaria vesca HOM05D000002 ORTHO05D000047 2.3e-08 61.6 49 55.1
Hma1.2p1_0292F.1_g115520 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.3e-08 61.6 59 42.4
Hma1.2p1_0915F.1_g236310 Hydrangea macrophylla HOM05D001900 ORTHO05D009822 2.3e-08 61.6 59 42.4
SHI28058 Sapria himalayana HOM05D000002 ORTHO05D000047 2.3e-08 61.6 51 54.9
CSS0014488 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.1e-08 61.2 59 44.1
Hma1.2p1_0281F.1_g113200 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.0e-08 60.8 59 44.1
Psat1g012160 Pisum sativum HOM05D000002 ORTHO05D000047 4.0e-08 60.8 59 40.7
Psat3g037520 Pisum sativum HOM05D000002 ORTHO05D000047 4.0e-08 60.8 59 40.7
Psat7g100400 Pisum sativum HOM05D000002 ORTHO05D000047 4.0e-08 60.8 59 40.7
SEGI_27781 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 4.0e-08 60.8 59 42.4
arahy.Tifrunner.gnm1.ann1.3LWB0T Arachis hypogaea HOM05D000002 ORTHO05D000047 5.2e-08 60.5 59 40.7
arahy.Tifrunner.gnm1.ann1.U3X8MH Arachis hypogaea HOM05D000002 ORTHO05D000047 5.2e-08 60.5 59 40.7
arahy.Tifrunner.gnm1.ann1.Z24LQA Arachis hypogaea HOM05D000002 ORTHO05D000047 5.2e-08 60.5 59 40.7
Psat4g188040 Pisum sativum HOM05D000002 ORTHO05D000047 5.2e-08 60.5 59 42.4
TPR.G10214 Trifolium pratense HOM05D000002 ORTHO05D000001 5.2e-08 60.5 59 44.1
Cpa.g.sc138.40 Carica papaya HOM05D000002 ORTHO05D000047 6.8e-08 60.1 45 60.0
Psat3g164600 Pisum sativum HOM05D005888 ORTHO05D007791 6.8e-08 60.1 59 40.7
Psat3g182040 Pisum sativum HOM05D000002 ORTHO05D000047 6.8e-08 60.1 59 40.7
Psat5g247280 Pisum sativum HOM05D000002 ORTHO05D000047 6.8e-08 60.1 59 40.7
Psat5g276720 Pisum sativum HOM05D000002 ORTHO05D000047 6.8e-08 60.1 59 40.7
Psat7g020120 Pisum sativum HOM05D000002 ORTHO05D000047 6.8e-08 60.1 59 40.7
Psat7g053200 Pisum sativum HOM05D000002 ORTHO05D000047 6.8e-08 60.1 59 40.7
Sabra08G0045900 Salix brachista HOM05D000002 ORTHO05D000047 6.8e-08 60.1 59 42.4
Sabra09G0110300 Salix brachista HOM05D000002 ORTHO05D000047 6.8e-08 60.1 59 42.4
Sabra16G0314700 Salix brachista HOM05D000002 ORTHO05D000047 6.8e-08 60.1 59 42.4
Sabra17G0041500 Salix brachista HOM05D000002 ORTHO05D000047 6.8e-08 60.1 59 42.4
Thecc.01G255400 Theobroma cacao HOM05D000002 ORTHO05D000047 6.8e-08 60.1 43 58.1
Manes.13G000072 Manihot esculenta HOM05D000002 ORTHO05D000047 8.9e-08 59.7 50 52.0
Psat7g232840 Pisum sativum HOM05D000002 ORTHO05D000047 8.9e-08 59.7 59 39.0
Sabra16G0272300 Salix brachista HOM05D000002 ORTHO05D000047 8.9e-08 59.7 59 42.4
Psat5g170560 Pisum sativum HOM05D000002 ORTHO05D000047 2.0e-07 58.5 59 39.0
arahy.Tifrunner.gnm1.ann1.P3W6IN Arachis hypogaea HOM05D000002 ORTHO05D000047 2.6e-07 58.2 59 39.0
ECA238G0736 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.4e-07 57.8 60 46.7
Hma1.2p1_0033F.1_g020960 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.4e-07 57.8 61 45.9
Atru.chr6.370 Acer truncatum HOM05D000002 ORTHO05D000047 5.8e-07 57.0 59 42.4
Psat1g154800 Pisum sativum HOM05D000002 ORTHO05D000047 5.8e-07 57.0 59 39.0
Psat1g137800 Pisum sativum HOM05D000002 ORTHO05D000047 7.6e-07 56.6 59 39.0
Psat1g099520 Pisum sativum HOM05D000002 ORTHO05D000047 9.9e-07 56.2 59 39.0
Psat0s1566g0160 Pisum sativum HOM05D000002 ORTHO05D000047 1.7e-06 55.5 59 35.6
Psat7g045560 Pisum sativum HOM05D000002 ORTHO05D000047 1.7e-06 55.5 59 39.0
CSS0012133 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.2e-06 55.1 58 39.7
AUR62009657 Chenopodium quinoa HOM05D000002 ORTHO05D000047 2.2e-06 55.1 58 34.5
Manes.16G046469 Manihot esculenta HOM05D000002 ORTHO05D000047 2.2e-06 55.1 35 60.0
Psat5g143640 Pisum sativum HOM05D000002 ORTHO05D000047 2.2e-06 55.1 59 37.3
Prupe.1G241200 Prunus persica HOM05D000002 ORTHO05D000047 2.2e-06 55.1 58 36.2
Prupe.6G115900 Prunus persica HOM05D000002 ORTHO05D000047 2.2e-06 55.1 58 36.2
Eucgr.I00138 Eucalyptus grandis HOM05D000002 ORTHO05D000047 2.9e-06 54.7 52 38.5
Prupe.3G076700 Prunus persica HOM05D000002 ORTHO05D000047 2.9e-06 54.7 58 36.2
Prupe.6G327500 Prunus persica HOM05D000002 ORTHO05D000047 2.9e-06 54.7 58 36.2
RcHm_v2.0_Chr1g0341931 Rosa chinensis HOM05D000002 ORTHO05D000047 3.7e-06 54.3 49 46.9
CiPaw.10G061100 Carya illinoinensis HOM05D000002 ORTHO05D000047 4.9e-06 53.9 59 40.7
Hma1.2p1_1430F.1_g282970 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.9e-06 53.9 59 42.4
Sabra04G0151400 Salix brachista HOM05D000002 ORTHO05D000047 4.9e-06 53.9 59 37.3
Sabra05G0049300 Salix brachista HOM05D000002 ORTHO05D000047 4.9e-06 53.9 59 37.3
Sabra11G0110600 Salix brachista HOM05D000002 ORTHO05D000047 4.9e-06 53.9 59 37.3
Sabra18G0042000 Salix brachista HOM05D000002 ORTHO05D000047 4.9e-06 53.9 59 37.3
CSS0019500 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.4e-06 53.5 58 37.9
CiPaw.06G017400 Carya illinoinensis HOM05D000002 ORTHO05D000047 6.4e-06 53.5 59 40.7
Sabra09G0024400 Salix brachista HOM05D000002 ORTHO05D000047 6.4e-06 53.5 59 39.0
CSS0000940 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.4e-06 53.1 58 37.9
CSS0004057 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.4e-06 53.1 58 37.9
CSS0009499 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.4e-06 53.1 58 37.9
CSS0013318 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.4e-06 53.1 58 37.9
CSS0020187 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.4e-06 53.1 58 37.9
CSS0021109 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.4e-06 53.1 58 37.9
CSS0021536 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.4e-06 53.1 58 37.9
CSS0027844 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.4e-06 53.1 58 37.9
CSS0034457 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.4e-06 53.1 58 37.9
CSS0036738 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.4e-06 53.1 58 37.9
CSS0045746 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.4e-06 53.1 58 37.9
Hma1.2p1_0308F.1_g120220 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.4e-06 53.1 40 65.0
Hma1.2p1_0812F.1_g222220 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.4e-06 53.1 56 39.3


User provided reference genes

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