Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc302.1 Carica papaya HOM05D000963 ORTHO05D004715 5.3e-33 143.7 68 100.0
Gohir.1Z049781 Gossypium hirsutum HOM05D000963 ORTHO05D004715 5.0e-31 137.1 66 98.5
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 5.0e-31 137.1 66 98.5
Gohir.D01G169154 Gossypium hirsutum HOM05D000963 ORTHO05D004715 5.0e-31 137.1 66 98.5
Gohir.D11G164850 Gossypium hirsutum HOM05D000963 ORTHO05D004715 5.0e-31 137.1 66 98.5
Atru.chr1.3576 Acer truncatum HOM05D000963 ORTHO05D004715 1.4e-30 135.6 67 97.0
AL9U11970 Arabidopsis lyrata HOM05D000963 ORTHO05D004715 1.4e-30 135.6 67 97.0
C09p40280 Brassica napus HOM05D000963 ORTHO05D004715 1.4e-30 135.6 67 97.0
BolSC44t60816H Brassica oleracea HOM05D000963 ORTHO05D004715 1.4e-30 135.6 67 97.0
BolSC44t60829H Brassica oleracea HOM05D000963 ORTHO05D004715 1.4e-30 135.6 67 97.0
BolSC45t60916H Brassica oleracea HOM05D000963 ORTHO05D004715 1.4e-30 135.6 67 97.0
BolSC49t61135H Brassica oleracea HOM05D000963 ORTHO05D004715 1.4e-30 135.6 67 97.0
BraSC103t45422Z Brassica rapa HOM05D000963 ORTHO05D004715 1.4e-30 135.6 67 97.0
BraSC103t45433Z Brassica rapa HOM05D000963 ORTHO05D004715 1.4e-30 135.6 67 97.0
BraSC25t45904Z Brassica rapa HOM05D000963 ORTHO05D004715 1.4e-30 135.6 67 97.0
BraSC25t45917Z Brassica rapa HOM05D000963 ORTHO05D004715 1.4e-30 135.6 67 97.0
BraSC59t46506Z Brassica rapa HOM05D000963 ORTHO05D004715 1.4e-30 135.6 67 97.0
Sed0014585 Sechium edule HOM05D000963 ORTHO05D004715 1.4e-30 135.6 67 97.0
QL93p0141_0000 Quercus lobata HOM05D000963 ORTHO05D004715 1.9e-30 135.2 67 95.5
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 3.2e-30 134.4 66 93.9
QL10p017079 Quercus lobata HOM05D000963 ORTHO05D004715 3.2e-30 134.4 67 95.5
QL93p0141_0026 Quercus lobata HOM05D000963 ORTHO05D004715 3.2e-30 134.4 67 95.5
BolSC46t60965H Brassica oleracea HOM05D000963 ORTHO05D004715 4.2e-30 134.0 66 97.0
COL.COLO4_02154 Corchorus olitorius HOM05D000963 ORTHO05D004715 4.2e-30 134.0 66 97.0
Sed0006422 Sechium edule HOM05D000963 ORTHO05D004715 5.5e-30 133.7 67 95.5
Gohir.A01G119775 Gossypium hirsutum HOM05D000963 ORTHO05D004715 7.2e-30 133.3 66 95.5
Gorai.012G060700 Gossypium raimondii HOM05D000963 ORTHO05D004715 7.2e-30 133.3 66 93.9
BraSC138t45541Z Brassica rapa HOM05D000963 ORTHO05D004715 9.4e-30 132.9 66 95.5
Lsat_1_v5_gn_1_88180 Lactuca sativa HOM05D000963 ORTHO05D004715 9.4e-30 132.9 67 95.5
Lsat_1_v5_gn_2_50801 Lactuca sativa HOM05D000963 ORTHO05D004715 9.4e-30 132.9 67 95.5
Lsat_1_v5_gn_2_97121 Lactuca sativa HOM05D000963 ORTHO05D004715 9.4e-30 132.9 67 95.5
Lsat_1_v5_gn_5_181901 Lactuca sativa HOM05D000963 ORTHO05D004715 9.4e-30 132.9 67 95.5
Lsat_1_v5_gn_5_4701 Lactuca sativa HOM05D000963 ORTHO05D004715 9.4e-30 132.9 67 95.5
Lsat_1_v5_gn_9_121741 Lactuca sativa HOM05D000963 ORTHO05D004715 9.4e-30 132.9 67 95.5
BolSC29t60514H Brassica oleracea HOM05D000963 ORTHO05D004715 1.6e-29 132.1 66 95.5
BolSC29t60541H Brassica oleracea HOM05D000963 ORTHO05D004715 1.6e-29 132.1 66 95.5
BolC9t56918H Brassica oleracea HOM05D000963 ORTHO05D004715 2.7e-29 131.3 67 95.5
BolSC37t60787H Brassica oleracea HOM05D000963 ORTHO05D004715 3.6e-29 131.0 68 95.6
Migut.D01391 Erythranthe guttata HOM05D000963 ORTHO05D004715 3.6e-29 131.0 67 94.0
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 4.7e-29 130.6 67 94.0
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 4.7e-29 130.6 67 94.0
Lsat_1_v5_gn_8_139840 Lactuca sativa HOM05D000963 ORTHO05D004715 4.7e-29 130.6 67 94.0
SalBow1G2814 Salvia bowleyana HOM05D000963 ORTHO05D004715 4.7e-29 130.6 67 94.0
SalBow1G5969 Salvia bowleyana HOM05D000963 ORTHO05D004715 4.7e-29 130.6 67 94.0
BolSC29t60553H Brassica oleracea HOM05D000963 ORTHO05D004715 6.1e-29 130.2 64 96.9
BraSC143t45652Z Brassica rapa HOM05D000963 ORTHO05D004715 6.1e-29 130.2 64 96.9
BraSC59t46544Z Brassica rapa HOM05D000963 ORTHO05D004715 6.1e-29 130.2 66 93.9
Sed0011513 Sechium edule HOM05D000963 ORTHO05D004715 8.0e-29 129.8 65 95.4
Lsat_1_v5_gn_2_90421 Lactuca sativa HOM05D000963 ORTHO05D004715 2.3e-28 128.3 67 92.5
CAN.G929.1 Capsicum annuum HOM05D000963 ORTHO05D004715 3.0e-28 127.9 68 94.1
Sopen06g015060 Solanum pennellii HOM05D000963 ORTHO05D004715 3.0e-28 127.9 68 94.1
PGSC0003DMG400034831 Solanum tuberosum HOM05D000963 ORTHO05D004715 3.0e-28 127.9 68 94.1
BolC2t10589H Brassica oleracea HOM05D000963 ORTHO05D004715 5.2e-28 127.1 66 92.4
CAN.G1298.20 Capsicum annuum HOM05D000963 ORTHO05D004715 8.8e-28 126.3 68 92.6
BraSC59t46533Z Brassica rapa HOM05D000963 ORTHO05D004715 2.0e-27 125.2 67 89.6
BolSC35t60711H Brassica oleracea HOM05D000963 ORTHO05D004715 4.4e-27 124.0 66 90.9
BolSC49t61150H Brassica oleracea HOM05D000963 ORTHO05D004715 4.4e-27 124.0 66 90.9
BolSC45t60901H Brassica oleracea HOM05D000963 ORTHO05D004715 1.7e-26 122.1 66 89.4
HPP92_028430 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.4e-25 119.0 66 84.8
Nitab4.5_0008665g0030 Nicotiana tabacum HOM05D000963 ORTHO05D004715 1.8e-25 118.6 68 88.2
Potri.002G263451 Populus trichocarpa HOM05D000963 ORTHO05D004715 1.8e-25 118.6 67 86.6
COL.COLO4_03191 Corchorus olitorius HOM05D000963 ORTHO05D004715 3.1e-25 117.9 66 87.9
Sed0012027 Sechium edule HOM05D000963 ORTHO05D004715 3.1e-25 117.9 66 89.4
BolC2t10606H Brassica oleracea HOM05D000963 ORTHO05D004715 4.1e-25 117.5 67 88.1
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 5.9e-24 113.6 67 82.1
FvH4_c3g00050 Fragaria vesca HOM05D000963 ORTHO05D004715 5.9e-24 113.6 58 93.1
Oeu012821.1 Olea europaea HOM05D000963 ORTHO05D004715 1.0e-23 112.8 66 84.8
Oeu050315.1 Olea europaea HOM05D000963 ORTHO05D004715 2.2e-23 111.7 57 94.7
CAN.G965.10 Capsicum annuum HOM05D000963 ORTHO05D004715 2.9e-23 111.3 68 85.3
Manes.18G094701 Manihot esculenta HOM05D000963 ORTHO05D004715 1.1e-22 109.4 62 85.5
EL10Ac7g17374 Beta vulgaris HOM05D000963 ORTHO05D004715 2.5e-22 108.2 62 85.5
Medtr5g080940 Medicago truncatula HOM05D000963 ORTHO05D004715 4.2e-22 107.5 64 82.8
FAN13G1706 Fragaria x ananassa HOM05D000963 ORTHO05D004715 1.2e-21 105.9 58 87.9
EL10Ac7g17381 Beta vulgaris HOM05D000963 ORTHO05D004715 1.4e-20 102.4 62 80.6
Nitab4.5_0004137g0020 Nicotiana tabacum HOM05D000963 ORTHO05D004715 1.8e-20 102.1 67 83.6
Sabra11G0069300 Salix brachista HOM05D000963 ORTHO05D004715 1.8e-20 102.1 51 96.1
SabraPtG0005400 Salix brachista HOM05D000963 ORTHO05D004715 1.8e-20 102.1 51 96.1
Sed0003522 Sechium edule HOM05D000963 ORTHO05D004715 1.8e-20 102.1 51 96.1
C09p39330 Brassica napus HOM05D000963 ORTHO05D004715 1.2e-19 99.4 50 96.0
arahy.Tifrunner.gnm1.ann1.D5AR02 Arachis hypogaea HOM05D000963 ORTHO05D004715 6.3e-18 93.6 67 73.1
Nitab4.5_0007400g0120 Nicotiana tabacum HOM05D000963 ORTHO05D004715 6.3e-18 93.6 68 73.5
Nitab4.5_0012234g0080 Nicotiana tabacum HOM05D000963 ORTHO05D004715 6.3e-18 93.6 50 92.0
BolSC43t60811H Brassica oleracea HOM05D000963 ORTHO05D004715 8.3e-18 93.2 45 97.8
BraSC179t45779Z Brassica rapa HOM05D000963 ORTHO05D004715 4.1e-17 90.9 44 97.7
FAN01G1433 Fragaria x ananassa HOM05D000963 ORTHO05D004715 5.3e-17 90.5 53 84.9
Gohir.A01G139826 Gossypium hirsutum HOM05D000963 ORTHO05D004715 9.1e-17 89.7 50 90.0
Oeu054713.1 Olea europaea HOM05D000963 ORTHO05D004715 9.1e-17 89.7 48 91.7
Lj4g0000207 Lotus japonicus HOM05D000963 ORTHO05D004715 1.2e-16 89.4 41 100.0
CSS0016818 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D004715 3.5e-16 87.8 47 91.5
arahy.Tifrunner.gnm1.ann1.HN8ZWX Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-15 85.5 41 95.1
CAN.G67.2 Capsicum annuum HOM05D000963 ORTHO05D004715 2.9e-15 84.7 80 63.8
Thecc.09G087300 Theobroma cacao HOM05D000963 ORTHO05D004715 2.9e-15 84.7 43 95.3
Gohir.A07G151200 Gossypium hirsutum HOM05D000963 ORTHO05D004715 3.8e-15 84.3 40 97.5
FvH4_7g01961 Fragaria vesca HOM05D000963 ORTHO05D004715 5.0e-15 84.0 45 88.9
FAN06G2610 Fragaria x ananassa HOM05D000963 ORTHO05D004715 8.5e-15 83.2 45 88.9
Gohir.A04G057626 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.9e-14 82.0 40 95.0
Potri.011G074033 Populus trichocarpa HOM05D000963 ORTHO05D004715 4.2e-14 80.9 41 92.7
Aqoxy38s008 Aquilegia oxysepala HOM05D000963 ORTHO05D004715 5.5e-14 80.5 41 90.2
Gohir.D04G096676 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.6e-13 79.0 40 90.0
Gohir.D04G054150 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.7e-13 78.2 40 92.5
HPP92_028383 Vanilla planifolia HOM05D000963 ORTHO05D004715 6.1e-13 77.0 40 87.5
HPP92_028406 Vanilla planifolia HOM05D000963 ORTHO05D004715 6.1e-13 77.0 40 87.5
HPP92_028415 Vanilla planifolia HOM05D000963 ORTHO05D004715 6.1e-13 77.0 40 87.5
HPP92_028419 Vanilla planifolia HOM05D000963 ORTHO05D004715 6.1e-13 77.0 40 87.5
HPP92_028432 Vanilla planifolia HOM05D000963 ORTHO05D004715 6.1e-13 77.0 40 87.5
Sabra08G0089800 Salix brachista HOM05D000963 ORTHO05D004715 1.8e-12 75.5 41 87.8
Sc01g0005720 Simmondsia chinensis HOM05D000963 ORTHO05D004715 3.7e-10 67.8 41 80.5
Oeu033793.1 Olea europaea HOM05D001982 ORTHO05D003938 8.3e-10 66.6 40 82.5
Oeu015131.2 Olea europaea HOM05D000963 ORTHO05D004715 1.1e-09 66.2 41 80.5
Gohir.A05G286366 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.4e-09 65.9 35 91.4


User provided reference genes

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