Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc30.65 Carica papaya HOM05D005256 ORTHO05D006491 1.2e-74 283.5 192 100.0
Potri.003G157100 Populus trichocarpa HOM05D005256 ORTHO05D006491 3.6e-50 202.2 162 69.8
Sabra03G0114000 Salix brachista HOM05D005256 ORTHO05D006491 2.3e-49 199.5 159 67.3
Manes.16G060225 Manihot esculenta HOM05D005256 ORTHO05D006491 3.0e-49 199.1 133 78.2
Atru.chr10.203 Acer truncatum HOM05D005256 ORTHO05D006491 4.4e-48 195.3 166 65.1
Nn1g09867 Nelumbo nucifera HOM05D005256 ORTHO05D006491 4.4e-48 195.3 149 70.5
Haze_05185 Corylus avellana HOM05D005256 ORTHO05D006491 7.4e-48 194.5 159 67.3
TWI63G0333 Tripterygium wilfordii HOM05D005256 ORTHO05D006491 3.7e-47 192.2 160 66.9
QL11p010746 Quercus lobata HOM05D005256 ORTHO05D006491 4.8e-47 191.8 153 68.0
Ciclev10016618m.g Citrus clementina HOM05D005256 ORTHO05D006491 1.4e-46 190.3 139 73.4
Eucgr.D00001 Eucalyptus grandis HOM05D005256 ORTHO05D006491 2.4e-46 189.5 151 70.9
Potri.001G073900 Populus trichocarpa HOM05D005256 ORTHO05D006491 3.1e-46 189.1 161 64.0
Sabra01G0052200 Salix brachista HOM05D005256 ORTHO05D006491 5.3e-46 188.3 149 68.5
CANSAT35G0328 Cannabis sativa HOM05D005256 ORTHO05D006491 7.0e-46 188.0 134 71.6
Glyma.15G154700 Glycine max HOM05D005256 ORTHO05D006491 7.0e-46 188.0 149 67.8
Dinv07938 Davidia involucrata HOM05D005256 ORTHO05D006491 9.1e-46 187.6 135 71.9
Dinv18415 Davidia involucrata HOM05D005256 ORTHO05D006491 9.1e-46 187.6 135 71.9
TAR626G1126 Trochodendron aralioides HOM05D005256 ORTHO05D006491 1.2e-45 187.2 132 74.2
Glyma.09G047200 Glycine max HOM05D005256 ORTHO05D006491 1.5e-45 186.8 148 67.6
GSVIVG01001340001 Vitis vinifera HOM05D005256 ORTHO05D006491 1.5e-45 186.8 134 73.1
Sopen10g001120 Solanum pennellii HOM05D005256 ORTHO05D006491 3.4e-45 185.7 172 58.1
CSS0021462 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 4.5e-45 185.3 136 70.6
Medtr2g437530 Medicago truncatula HOM05D005256 ORTHO05D006491 5.9e-45 184.9 161 60.9
TAR624G1249 Trochodendron aralioides HOM05D005256 ORTHO05D006491 5.9e-45 184.9 160 65.0
Aa31LG6G2690 Aethionema arabicum HOM05D005256 ORTHO05D006491 7.7e-45 184.5 135 67.4
CiPaw.09G140800 Carya illinoinensis HOM05D005256 ORTHO05D006491 1.0e-44 184.1 135 71.1
Peaxi162Scf00888g00114 Petunia axillaris HOM05D005256 ORTHO05D006491 1.7e-44 183.3 134 69.4
Psat1g152160 Pisum sativum HOM05D005256 ORTHO05D006491 2.2e-44 183.0 161 62.1
MD05G1242300 Malus domestica HOM05D005256 ORTHO05D006491 2.9e-44 182.6 145 68.3
CAN.G465.5 Capsicum annuum HOM05D005256 ORTHO05D006491 3.8e-44 182.2 173 59.0
COL.COLO4_25022 Corchorus olitorius HOM05D005256 ORTHO05D006491 3.8e-44 182.2 133 74.4
MD10G1224100 Malus domestica HOM05D005256 ORTHO05D006491 5.0e-44 181.8 159 64.8
EL10Ac7g17298 Beta vulgaris HOM05D005256 ORTHO05D006491 6.5e-44 181.4 165 59.4
MBI07_g44405_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 6.5e-44 181.4 161 62.7
Solyc10g005100.3 Solanum lycopersicum HOM05D005256 ORTHO05D006491 8.5e-44 181.0 135 67.4
PGSC0003DMG400011293 Solanum tuberosum HOM05D005256 ORTHO05D006491 1.4e-43 180.3 162 61.1
AT4G20260 Arabidopsis thaliana HOM05D005256 ORTHO05D006491 1.9e-43 179.9 135 71.1
CARHR227090 Cardamine hirsuta HOM05D005256 ORTHO05D006491 3.2e-43 179.1 164 61.0
Hma1.2p1_0082F.1_g042560 Hydrangea macrophylla HOM05D005256 ORTHO05D006491 3.2e-43 179.1 160 61.9
AL7G33640 Arabidopsis lyrata HOM05D005256 ORTHO05D006491 4.2e-43 178.7 149 65.1
Rhsim13G0136300 Rhododendron simsii HOM05D005256 ORTHO05D006491 5.5e-43 178.3 135 67.4
THA.LOC104811953 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 7.2e-43 177.9 136 68.4
arahy.Tifrunner.gnm1.ann1.98CSRD Arachis hypogaea HOM05D005256 ORTHO05D006491 9.4e-43 177.6 136 67.6
Thhalv10026094m.g Eutrema salsugineum HOM05D005256 ORTHO05D006491 9.4e-43 177.6 150 62.7
Lj6g0014214 Lotus japonicus HOM05D005256 ORTHO05D006491 9.4e-43 177.6 148 66.2
TPR.G31382 Trifolium pratense HOM05D005256 ORTHO05D006491 9.4e-43 177.6 160 60.6
CSS0003949 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 1.2e-42 177.2 134 66.4
THA.LOC104812925 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 1.2e-42 177.2 130 70.0
ATR0737G015 Amborella trichopoda HOM05D005256 ORTHO05D006491 1.6e-42 176.8 160 61.9
Ca_02405_v3 Cicer arietinum L. HOM05D005256 ORTHO05D006491 2.1e-42 176.4 162 58.6
Nitab4.5_0004778g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 2.1e-42 176.4 135 65.9
Phvul.009G245700 Phaseolus vulgaris HOM05D005256 ORTHO05D006491 2.1e-42 176.4 149 65.1
arahy.Tifrunner.gnm1.ann1.QDE700 Arachis hypogaea HOM05D005256 ORTHO05D006491 2.7e-42 176.0 135 67.4
A01p11960 Brassica napus HOM05D005256 ORTHO05D006491 2.7e-42 176.0 151 62.9
BcaC09g51326 Brassica carinata HOM05D005256 ORTHO05D006491 3.6e-42 175.6 126 71.4
C01p14230 Brassica napus HOM05D005256 ORTHO05D006491 3.6e-42 175.6 126 71.4
C07p50830 Brassica napus HOM05D005256 ORTHO05D006491 3.6e-42 175.6 163 59.5
BolC1t01388H Brassica oleracea HOM05D005256 ORTHO05D006491 3.6e-42 175.6 126 71.4
BraA01t01138Z Brassica rapa HOM05D005256 ORTHO05D006491 3.6e-42 175.6 126 71.4
Lalb_Chr18g0051841 Lupinus albus HOM05D005256 ORTHO05D006491 3.6e-42 175.6 162 62.3
vmacro03574 Vaccinium macrocarpon HOM05D005256 ORTHO05D006491 3.6e-42 175.6 135 67.4
Prupe.4G121100 Prunus persica HOM05D005256 ORTHO05D006491 6.1e-42 174.9 135 69.6
BolC7t45581H Brassica oleracea HOM05D005256 ORTHO05D006491 1.0e-41 174.1 126 69.0
Carub.0007s2091 Capsella rubella HOM05D005256 ORTHO05D006491 1.0e-41 174.1 126 69.0
BraA03t14315Z Brassica rapa HOM05D005256 ORTHO05D006491 1.4e-41 173.7 126 68.3
MSTRG.14820 Avicennia marina HOM05D005256 ORTHO05D006491 2.3e-41 172.9 144 64.6
A03p52380 Brassica napus HOM05D005256 ORTHO05D006491 2.3e-41 172.9 126 68.3
BcaC06g30648 Brassica carinata HOM05D005256 ORTHO05D006491 3.0e-41 172.6 126 67.5
Hund20133 Selenicereus undatus HOM05D005256 ORTHO05D006491 3.9e-41 172.2 162 56.8
BcaNung03497 Brassica carinata HOM05D005256 ORTHO05D006491 5.2e-41 171.8 126 68.3
Oeu005126.1 Olea europaea HOM05D005256 ORTHO05D006491 6.7e-41 171.4 163 58.9
CDE02G1470 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 8.8e-41 171.0 133 67.7
AUR62040985 Chenopodium quinoa HOM05D005256 ORTHO05D006491 1.1e-40 170.6 163 57.7
Sp7g18620 Schrenkiella parvula HOM05D005256 ORTHO05D006491 1.1e-40 170.6 149 61.7
Ah.15g091820 Amaranthus hybridus HOM05D005256 ORTHO05D006491 2.6e-40 169.5 136 64.7
Thecc.02G000700 Theobroma cacao HOM05D005256 ORTHO05D006491 2.6e-40 169.5 126 72.2
Lsat_1_v5_gn_2_59820 Lactuca sativa HOM05D005256 ORTHO05D006491 3.3e-40 169.1 160 56.2
Lalb_Chr15g0083621 Lupinus albus HOM05D005256 ORTHO05D006491 3.3e-40 169.1 135 68.1
Oeu052922.1 Olea europaea HOM05D005256 ORTHO05D006491 4.4e-40 168.7 166 56.6
FAN11G1371 Fragaria x ananassa HOM05D005256 ORTHO05D006491 5.7e-40 168.3 154 60.4
CiPaw.10G108500 Carya illinoinensis HOM05D005256 ORTHO05D006491 7.4e-40 167.9 137 67.9
RcHm_v2.0_Chr5g0022081 Rosa chinensis HOM05D005256 ORTHO05D006491 9.7e-40 167.5 151 62.9
FvH4_3g13370 Fragaria vesca HOM05D005256 ORTHO05D006491 1.3e-39 167.2 151 60.9
FAN21G0853 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.3e-39 167.2 154 59.7
MBI06_g04184_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 1.3e-39 167.2 158 58.9
Sc17g0004300 Simmondsia chinensis HOM05D005256 ORTHO05D006491 1.3e-39 167.2 135 65.2
VMungo1309G1298 Vigna mungo HOM05D005256 ORTHO05D006491 1.7e-39 166.8 134 69.4
FAN16G0515 Fragaria x ananassa HOM05D005256 ORTHO05D006491 2.2e-39 166.4 151 60.3
FAN25G1093 Fragaria x ananassa HOM05D005256 ORTHO05D006491 2.2e-39 166.4 153 60.1
CDE10G0480 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 1.4e-38 163.7 135 63.7
SalBow7G1744 Salvia bowleyana HOM05D005256 ORTHO05D006491 1.4e-38 163.7 164 63.4
CDE10G1097 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 7.0e-38 161.4 135 63.7
Peaxi162Scf01310g00311 Petunia axillaris HOM05D005256 ORTHO05D006491 7.0e-38 161.4 135 63.0
BcaNung03716 Brassica carinata HOM05D005256 ORTHO05D006491 2.6e-37 159.5 122 69.7
Migut.L00006 Erythranthe guttata HOM05D005256 ORTHO05D006491 2.6e-37 159.5 131 64.1
HPP92_008810 Vanilla planifolia HOM05D005256 ORTHO05D006491 5.9e-37 158.3 130 66.9
HanXRQChr15g0487481 Helianthus annuus HOM05D005256 ORTHO05D006491 1.3e-36 157.1 131 61.1
ECA238G2220 Erigeron canadensis HOM05D005256 ORTHO05D006491 2.9e-36 156.0 132 62.1
C07p27480 Brassica napus HOM05D005256 ORTHO05D006491 6.5e-36 154.8 166 58.4
HanXRQChr14g0439031 Helianthus annuus HOM05D005256 ORTHO05D006491 8.5e-36 154.5 161 53.4
FAN25G0981 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.1e-35 154.1 153 58.2
Lsat_1_v5_gn_8_107621 Lactuca sativa HOM05D005256 ORTHO05D006491 1.1e-35 154.1 131 59.5
BcaC06g34533 Brassica carinata HOM05D005256 ORTHO05D006491 1.9e-35 153.3 166 57.8
Cc09_g04590 Coffea canephora HOM05D005256 ORTHO05D006491 2.5e-35 152.9 158 59.5
BolC7t43278H Brassica oleracea HOM05D005256 ORTHO05D006491 3.2e-35 152.5 166 57.8
ECA232G1901 Erigeron canadensis HOM05D005256 ORTHO05D006491 7.2e-35 151.4 131 59.5
A06p47070 Brassica napus HOM05D005256 ORTHO05D006491 9.4e-35 151.0 164 57.3
A09p21180 Brassica napus HOM05D005256 ORTHO05D006491 9.4e-35 151.0 157 54.8
BraA06t27579Z Brassica rapa HOM05D005256 ORTHO05D006491 9.4e-35 151.0 164 57.3
BraA09t37724Z Brassica rapa HOM05D005256 ORTHO05D006491 9.4e-35 151.0 157 54.8
Aa31LG9G8540 Aethionema arabicum HOM05D005256 ORTHO05D006491 1.2e-34 150.6 163 53.4
CDE09G1225 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 3.6e-34 149.1 168 56.5
PSO541G2657 Papaver somniferum HOM05D005256 ORTHO05D006491 1.4e-33 147.1 157 54.1
PSO675G8904 Papaver somniferum HOM05D005256 ORTHO05D006491 1.4e-33 147.1 157 54.1
BcaC04g21824 Brassica carinata HOM05D005256 ORTHO05D006491 1.8e-33 146.7 157 52.9
C09p27010 Brassica napus HOM05D005256 ORTHO05D006491 1.8e-33 146.7 157 52.9
BolC9t55584H Brassica oleracea HOM05D005256 ORTHO05D006491 1.8e-33 146.7 157 52.9
AUR62042105 Chenopodium quinoa HOM05D005256 ORTHO05D006491 2.3e-33 146.4 111 68.5
Nitab4.5_0000217g0040 Nicotiana tabacum HOM05D005256 ORTHO05D006491 3.0e-33 146.0 135 60.0
BcaB07g30517 Brassica carinata HOM05D005256 ORTHO05D006491 1.2e-32 144.1 167 55.1
BcaB07g30940 Brassica carinata HOM05D005256 ORTHO05D006491 1.5e-32 143.7 152 53.9
Os02g0285300 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 4.4e-32 142.1 137 61.3
HanXRQChr09g0257711 Helianthus annuus HOM05D005256 ORTHO05D006491 1.4e-30 137.1 131 55.7
Sp2g09430 Schrenkiella parvula HOM05D005256 ORTHO05D006491 5.3e-30 135.2 160 52.5
DCAR_003732 Daucus carota HOM05D005256 ORTHO05D006491 5.0e-28 128.6 131 55.0
Nitab4.5_0001253g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 5.0e-28 128.6 135 54.8
Nitab4.5_0012748g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 8.5e-28 127.9 100 67.0
Zm00001eb236850 Zea mays HOM05D005256 ORTHO05D006491 6.1e-26 121.7 111 65.8
C02p45090 Brassica napus HOM05D005256 ORTHO05D006491 4.4e-24 115.5 159 50.3
BolC2t10548H Brassica oleracea HOM05D005256 ORTHO05D006491 4.4e-24 115.5 159 50.3
MBI06_g26562_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 5.7e-24 115.2 98 60.2
Zm00001eb339340 Zea mays HOM05D005256 ORTHO05D006491 1.8e-22 110.2 155 45.8
Zm00001eb119130 Zea mays HOM05D005256 ORTHO05D006491 1.2e-21 107.5 132 50.0
Os01g0233000 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 1.0e-20 104.4 158 43.7
Lalb_Chr20g0114421 Lupinus albus HOM05D005256 ORTHO05D006491 1.0e-17 94.4 94 54.3
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 8.9e-17 91.3 68 72.1
Lsat_1_v5_gn_9_9820 Lactuca sativa HOM05D005256 ORTHO05D006491 2.2e-15 86.7 94 51.1
Mapoly0087s0006 Marchantia polymorpha HOM05D005256 ORTHO05D006491 5.8e-08 62.0 158 32.3
Zm00001eb381370 Zea mays HOM05D005256 ORTHO05D006491 1.1e-06 57.8 60 55.0
FvH4_7g19390 Fragaria vesca HOM05D036880 ORTHO05D006491 1.9e-06 57.0 55 56.4


User provided reference genes

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