Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc30.23 Carica papaya HOM05D000002 ORTHO05D000047 9.0e-50 199.9 98 100.0
Cpa.g.sc176.5 Carica papaya HOM05D000002 ORTHO05D000047 1.7e-32 142.5 85 80.0
Cpa.g.sc41.68 Carica papaya HOM05D000002 ORTHO05D000047 1.9e-31 139.0 85 78.8
Cpa.g.sc22.53 Carica papaya HOM05D000002 ORTHO05D000047 6.7e-21 104.0 56 80.4
Cpa.g.sc118.22 Carica papaya HOM05D000002 ORTHO05D000047 1.0e-16 90.1 62 62.9
Cpa.g.sc43.142 Carica papaya HOM05D000002 ORTHO05D000047 1.6e-14 82.8 46 82.6
Cpa.g.sc10.272 Carica papaya HOM05D000002 ORTHO05D000047 2.1e-14 82.4 45 80.0
Cpa.g.sc11.149 Carica papaya HOM05D000002 ORTHO05D000047 6.8e-13 77.4 70 51.4
Hma1.2p1_0018F.1_g013420 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.5e-12 73.9 75 41.3
Hma1.2p1_1349F.1_g277350 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.8e-11 71.2 69 43.5
Cpa.g.sc73.41 Carica papaya HOM05D000002 ORTHO05D000047 2.4e-10 68.9 45 64.4
Cpa.g.sc120.50 Carica papaya HOM05D006146 ORTHO05D007924 3.1e-10 68.6 63 47.6
Hma1.2p1_0526F.1_g172830 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.1e-10 68.2 75 40.0
Hma1.2p1_0349F.1_g132140 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.0e-10 67.4 50 52.0
Hma1.2p1_1551F.1_g290170 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.0e-10 67.4 50 52.0
Hma1.2p1_2309F.1_g319500 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.0e-10 67.4 50 52.0
Cpa.g.sc301.4 Carica papaya HOM05D000002 ORTHO05D000047 1.2e-09 66.6 59 50.8
TWI23G0973 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 1.6e-09 66.2 67 43.3
Cpa.g.sc3.386 Carica papaya HOM05D000002 ORTHO05D000047 2.0e-09 65.9 53 45.3
Hma1.2p1_0036F.1_g023540 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.0e-09 65.9 60 48.3
Cpa.g.sc54.65 Carica papaya HOM05D000002 ORTHO05D000047 2.7e-09 65.5 83 43.4
Hma1.2p1_0503F.1_g168050 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.7e-09 65.5 73 42.5
Cpa.g.sc29.59 Carica papaya HOM05D000002 ORTHO05D000047 4.5e-09 64.7 51 54.9
Hma1.2p1_0530F.1_g173310 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.5e-09 64.7 43 51.2
Cpa.g.sc15.92 Carica papaya HOM05D001549 ORTHO05D003098 7.7e-09 63.9 47 57.4
Hma1.2p1_0247F.1_g101820 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.7e-09 63.9 36 61.1
CSS0001169 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.0e-08 63.5 86 38.4
CSS0004984 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-08 63.5 41 58.5
Cpa.g.sc15.70 Carica papaya HOM05D000002 ORTHO05D000047 1.3e-08 63.2 59 45.8
Hma1.2p1_0172F.1_g076320 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.3e-08 63.2 34 61.8
Cpa.g.sc34.189 Carica papaya HOM05D000002 ORTHO05D000047 1.7e-08 62.8 45 57.8
Hma1.2p1_0164F.1_g073240 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.7e-08 62.8 50 48.0
Hma1.2p1_1513F.1_g288010 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.7e-08 62.8 52 46.2
Hma1.2p1_0744F.1_g211780 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.2e-08 62.4 41 58.5
Cpa.g.sc133.6 Carica papaya HOM05D000002 ORTHO05D000047 2.9e-08 62.0 47 55.3
Hma1.2p1_0077F.1_g039800 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.9e-08 62.0 33 63.6
Hma1.2p1_0270F.1_g108600 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.9e-08 62.0 58 43.1
Nn5g30897 Nelumbo nucifera HOM05D000002 ORTHO05D000047 3.8e-08 61.6 59 45.8
CSS0000858 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.0e-08 61.2 56 48.2
CSS0004866 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.0e-08 61.2 56 48.2
CSS0007796 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.0e-08 61.2 56 48.2
CSS0010335 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.0e-08 61.2 56 48.2
CSS0010794 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.0e-08 61.2 56 48.2
CSS0011005 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.0e-08 61.2 56 48.2
CSS0017883 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.0e-08 61.2 56 48.2
CSS0027817 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.0e-08 61.2 56 48.2
CSS0029482 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.0e-08 61.2 56 48.2
CSS0032452 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.0e-08 61.2 56 48.2
CSS0033236 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.0e-08 61.2 56 48.2
CSS0037461 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.0e-08 61.2 56 48.2
CSS0038170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.0e-08 61.2 56 48.2
CSS0038278 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.0e-08 61.2 56 48.2
CSS0041031 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.0e-08 61.2 56 48.2
CSS0048989 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.0e-08 61.2 56 48.2
CSS0050398 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.0e-08 61.2 56 48.2
Cpa.g.sc12.143 Carica papaya HOM05D000002 ORTHO05D000047 5.0e-08 61.2 69 33.3
Cpa.g.sc5.346 Carica papaya HOM05D000002 ORTHO05D000047 5.0e-08 61.2 66 45.5
Atru.chr3.1979 Acer truncatum HOM05D000002 ORTHO05D000047 6.5e-08 60.8 71 40.8
CSS0001250 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.5e-08 60.8 82 39.0
CSS0024170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.5e-08 60.8 82 39.0
CSS0039193 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.5e-08 60.8 82 39.0
Cpa.g.sc176.9 Carica papaya HOM05D000002 ORTHO05D000047 6.5e-08 60.8 44 59.1
Hma1.2p1_0450F.1_g155525 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.5e-08 60.8 65 43.1
Hma1.2p1_0450F.1_g155530 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.5e-08 60.8 65 43.1
Hma1.2p1_0450F.1_g155540 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.5e-08 60.8 65 43.1
Hma1.2p1_0450F.1_g155545 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.5e-08 60.8 65 43.1
Hma1.2p1_1549F.1_g290080 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.5e-08 60.8 41 56.1
Cpa.g.sc25.53 Carica papaya HOM05D000002 ORTHO05D000047 8.5e-08 60.5 44 56.8
Hma1.2p1_0232F.1_g097650 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.5e-08 60.5 39 59.0
Hma1.2p1_0706F.1_g207010 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 8.5e-08 60.5 52 44.2
Hma1.2p1_1043F.1_g251210 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.5e-08 60.5 49 51.0
Hma1.2p1_1113F.1_g258670 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.5e-08 60.5 41 56.1
Oeu026778.1 Olea europaea HOM05D000002 ORTHO05D000001 8.5e-08 60.5 42 52.4
Cpa.g.sc7.260 Carica papaya HOM05D000002 ORTHO05D000047 1.1e-07 60.1 72 37.5
Nn2g11309 Nelumbo nucifera HOM05D000002 ORTHO05D000047 1.1e-07 60.1 71 40.8
CSS0000519 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-07 59.3 56 46.4
CSS0017511 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.9e-07 59.3 56 46.4
Cpa.g.sc58.26 Carica papaya HOM05D000002 ORTHO05D000047 1.9e-07 59.3 69 31.9
Cpa.g.sc6.149 Carica papaya HOM05D000002 ORTHO05D000047 1.9e-07 59.3 36 77.8
SHI26944 Sapria himalayana HOM05D000002 ORTHO05D000047 1.9e-07 59.3 39 59.0
Hma1.2p1_0217F.1_g091730 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.5e-07 58.9 32 62.5
Hma1.2p1_0628F.1_g191990 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.5e-07 58.9 32 62.5
Nn7g38028 Nelumbo nucifera HOM05D000002 ORTHO05D000047 2.5e-07 58.9 57 45.6
Hma1.2p1_0722F.1_g208760 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.2e-07 58.5 32 62.5
GSVIVG01038208001 Vitis vinifera HOM05D000002 ORTHO05D000047 3.2e-07 58.5 39 56.4
CSS0022055 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.2e-07 58.2 56 46.4
Cpa.g.sc24.57 Carica papaya HOM05D000002 ORTHO05D000047 4.2e-07 58.2 47 51.1
Hma1.2p1_0074F.1_g038980 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.2e-07 57.4 32 62.5
Hma1.2p1_3882F.1_g337890 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.4e-07 57.0 74 29.7
CSS0029966 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.2e-06 56.6 34 55.9
Cpa.g.sc122.32 Carica papaya HOM05D000002 ORTHO05D000047 1.2e-06 56.6 52 46.2
Cpa.g.sc28.123 Carica papaya HOM05D000207 ORTHO05D000047 1.2e-06 56.6 51 52.9
Hma1.2p1_0004F.1_g004100 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.2e-06 56.6 41 53.7
Hma1.2p1_0359F.1_g135490 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.2e-06 56.6 39 56.4
PSO063G1754 Papaver somniferum HOM05D000002 ORTHO05D000047 1.2e-06 56.6 64 42.2
Nn5g30282 Nelumbo nucifera HOM05D000002 ORTHO05D000047 1.6e-06 56.2 32 59.4
Oeu052091.1 Olea europaea HOM05D000002 ORTHO05D000001 2.1e-06 55.8 54 48.1
SHI11777 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-06 55.8 101 31.7
Hma1.2p1_0062F.1_g034270 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.7e-06 55.5 41 51.2
Hma1.2p1_0868F.1_g230500 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.7e-06 55.5 41 53.7
Nn1g04145 Nelumbo nucifera HOM05D000002 ORTHO05D000047 3.6e-06 55.1 46 47.8
Hma1.2p1_0072F.1_g038350 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.7e-06 54.7 32 59.4
PSO170G5778 Papaver somniferum HOM05D000002 ORTHO05D000047 4.7e-06 54.7 53 47.2
SHI48864 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-06 54.7 56 44.6
Sopen00g009150 Solanum pennellii HOM05D000002 ORTHO05D000001 6.1e-06 54.3 62 53.2
Sopen02g020640 Solanum pennellii HOM05D000002 ORTHO05D000001 6.1e-06 54.3 28 64.3
Sopen04g014630 Solanum pennellii HOM05D000002 ORTHO05D000001 6.1e-06 54.3 28 64.3
Sopen04g035530 Solanum pennellii HOM05D000002 ORTHO05D000001 6.1e-06 54.3 28 64.3
Sopen06g018590 Solanum pennellii HOM05D000002 ORTHO05D000001 6.1e-06 54.3 28 64.3
Sopen06g021680 Solanum pennellii HOM05D000002 ORTHO05D000001 6.1e-06 54.3 28 64.3
PSO170G5554 Papaver somniferum HOM05D000002 ORTHO05D000047 8.0e-06 53.9 45 51.1


User provided reference genes

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