Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc30.19 Carica papaya HOM05D006894 ORTHO05D008724 6.4e-51 203.8 101 100.0
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 2.8e-30 135.2 112 59.8
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 1.8e-29 132.5 112 58.0
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 3.1e-29 131.7 112 58.9
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 4.1e-29 131.3 112 58.9
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 6.9e-29 130.6 112 57.1
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 6.9e-29 130.6 112 57.1
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 6.9e-29 130.6 112 57.1
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 6.9e-29 130.6 112 58.9
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 6.9e-29 130.6 112 58.0
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 6.9e-29 130.6 112 58.0
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 6.9e-29 130.6 112 58.0
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 9.0e-29 130.2 112 58.0
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 9.0e-29 130.2 112 58.0
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 9.0e-29 130.2 111 57.7
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 1.2e-28 129.8 112 58.0
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 1.2e-28 129.8 112 58.0
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 1.5e-28 129.4 112 57.1
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 1.5e-28 129.4 112 56.2
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 2.0e-28 129.0 112 57.1
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 2.6e-28 128.6 112 57.1
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 2.6e-28 128.6 112 57.1
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 2.6e-28 128.6 112 55.4
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 3.4e-28 128.3 111 58.6
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 3.4e-28 128.3 111 58.6
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 4.5e-28 127.9 112 56.2
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 4.5e-28 127.9 112 56.2
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 5.9e-28 127.5 112 56.2
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 5.9e-28 127.5 112 54.5
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 7.7e-28 127.1 112 57.1
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 1.0e-27 126.7 112 57.1
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 1.7e-27 125.9 112 56.2
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 2.2e-27 125.6 112 56.2
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 2.2e-27 125.6 109 56.0
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 5.0e-27 124.4 112 54.5
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 5.0e-27 124.4 112 54.5
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 5.0e-27 124.4 112 57.1
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 5.0e-27 124.4 112 56.2
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 6.5e-27 124.0 111 56.8
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 6.5e-27 124.0 112 55.4
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 6.5e-27 124.0 112 57.1
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 6.5e-27 124.0 112 57.1
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 8.5e-27 123.6 112 54.5
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 8.5e-27 123.6 112 56.2
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 1.1e-26 123.2 122 51.6
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 1.1e-26 123.2 111 56.8
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 1.9e-26 122.5 112 52.7
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 2.5e-26 122.1 112 55.4
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 2.5e-26 122.1 112 55.4
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 3.2e-26 121.7 112 55.4
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 4.2e-26 121.3 111 55.0
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 4.2e-26 121.3 107 57.9
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 4.2e-26 121.3 112 54.5
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 5.5e-26 120.9 112 51.8
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 5.5e-26 120.9 111 55.9
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 9.4e-26 120.2 112 56.2
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 9.4e-26 120.2 112 51.8
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 1.6e-25 119.4 112 51.8
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 1.6e-25 119.4 112 52.7
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 2.7e-25 118.6 111 55.0
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 4.6e-25 117.9 111 51.4
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 4.6e-25 117.9 112 51.8
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 7.9e-25 117.1 112 50.9
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 7.9e-25 117.1 112 50.9
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 1.4e-24 116.3 112 50.9
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 2.3e-24 115.5 112 52.7
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 3.9e-24 114.8 112 49.1
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 5.1e-24 114.4 112 54.5
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 1.1e-23 113.2 112 50.9
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 1.1e-23 113.2 109 56.0
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 2.0e-23 112.5 112 50.9
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 2.0e-23 112.5 112 52.7
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 4.3e-23 111.3 112 50.0
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 4.3e-23 111.3 112 50.0
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 5.7e-23 110.9 112 50.0
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 9.7e-23 110.2 112 49.1
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 9.7e-23 110.2 111 50.5
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 1.7e-22 109.4 112 49.1
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 3.7e-22 108.2 112 46.4
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 6.3e-22 107.5 112 48.2
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 1.1e-21 106.7 112 47.3
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 5.3e-21 104.4 112 47.3
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 5.3e-21 104.4 111 42.3
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 4.5e-20 101.3 112 48.2
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 1.0e-19 100.1 112 44.6
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 6.5e-19 97.4 112 44.6
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 1.1e-18 96.7 112 43.8
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 5.5e-18 94.4 112 39.3
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 2.7e-17 92.0 111 41.4
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 4.7e-17 91.3 57 73.7
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 6.1e-17 90.9 56 75.0
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 1.4e-16 89.7 107 40.2
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 2.3e-16 89.0 113 40.7
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 5.1e-16 87.8 97 46.4
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 1.1e-15 86.7 56 71.4
ClCG09G014040 Citrullus lanatus HOM05D006894 ORTHO05D008724 9.7e-15 83.6 55 72.7
Glyma.08G127500 Glycine max HOM05D006894 ORTHO05D008724 2.2e-14 82.4 82 48.8
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 4.1e-13 78.2 53 64.2
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 1.6e-12 76.3 89 47.2
CAN.G798.10 Capsicum annuum HOM05D006894 ORTHO05D008724 2.5e-10 68.9 44 68.2
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 4.2e-10 68.2 56 48.2
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 1.0e-08 63.5 44 72.7
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 5.7e-07 57.8 41 65.9


User provided reference genes

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