Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc30.18 Carica papaya HOM05D006894 ORTHO05D008724 5.0e-84 314.3 150 100.0
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 4.0e-57 224.9 128 81.2
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 5.2e-57 224.6 132 80.3
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 7.6e-56 220.7 128 79.7
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 9.9e-56 220.3 129 79.1
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 9.9e-56 220.3 129 79.1
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 1.3e-55 219.9 128 77.3
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 2.2e-55 219.2 126 80.2
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 3.8e-55 218.4 128 78.9
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 6.4e-55 217.6 132 74.2
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 6.4e-55 217.6 132 74.2
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 8.4e-55 217.2 129 78.3
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 2.4e-54 215.7 126 80.2
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 4.1e-54 214.9 127 80.3
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 4.1e-54 214.9 127 79.5
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 7.1e-54 214.2 128 77.3
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 7.1e-54 214.2 126 77.0
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 7.1e-54 214.2 134 75.4
ClCG09G014030 Citrullus lanatus HOM05D006894 ORTHO05D008724 9.2e-54 213.8 132 73.5
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 9.2e-54 213.8 127 75.6
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 1.2e-53 213.4 126 77.0
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 1.2e-53 213.4 126 77.0
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 1.2e-53 213.4 129 76.0
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 1.2e-53 213.4 129 76.0
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 1.6e-53 213.0 127 78.7
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 3.5e-53 211.8 127 79.5
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 3.5e-53 211.8 130 74.6
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 3.5e-53 211.8 127 78.0
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 4.6e-53 211.5 133 74.4
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 4.6e-53 211.5 133 75.9
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 6.0e-53 211.1 138 71.7
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 6.0e-53 211.1 129 75.2
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 6.0e-53 211.1 127 78.7
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 7.8e-53 210.7 130 74.6
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 1.0e-52 210.3 133 74.4
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 1.3e-52 209.9 127 76.4
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 1.3e-52 209.9 134 76.1
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 1.7e-52 209.5 130 74.6
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 1.7e-52 209.5 127 75.6
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 3.0e-52 208.8 141 71.6
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 6.6e-52 207.6 141 71.6
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 8.6e-52 207.2 129 74.4
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 8.6e-52 207.2 127 77.2
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 1.1e-51 206.8 141 72.3
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 1.1e-51 206.8 131 69.5
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 1.5e-51 206.5 138 72.5
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 1.5e-51 206.5 127 74.8
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 1.9e-51 206.1 141 70.9
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 1.9e-51 206.1 130 72.3
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 3.3e-51 205.3 128 74.2
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 3.3e-51 205.3 130 73.8
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 5.6e-51 204.5 140 69.3
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 5.6e-51 204.5 129 72.9
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 7.3e-51 204.1 129 72.1
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 7.3e-51 204.1 139 71.2
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 7.3e-51 204.1 139 71.2
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 7.3e-51 204.1 139 71.2
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 9.6e-51 203.8 136 72.8
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 9.6e-51 203.8 128 73.4
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 9.6e-51 203.8 141 70.9
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 1.2e-50 203.4 129 72.1
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 1.6e-50 203.0 123 76.4
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 2.1e-50 202.6 129 75.2
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 2.1e-50 202.6 129 75.2
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 2.1e-50 202.6 127 71.7
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 2.8e-50 202.2 138 72.5
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 2.8e-50 202.2 128 73.4
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 3.6e-50 201.8 129 72.1
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 4.7e-50 201.4 138 71.0
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 6.2e-50 201.1 129 74.4
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 6.2e-50 201.1 139 69.8
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 1.1e-49 200.3 128 75.0
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 1.8e-49 199.5 128 72.7
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 1.8e-49 199.5 128 74.2
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 3.1e-49 198.7 130 71.5
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 3.1e-49 198.7 123 74.8
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 9.0e-49 197.2 130 71.5
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 2.6e-48 195.7 123 73.2
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 4.4e-48 194.9 136 70.6
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 7.6e-48 194.1 146 65.8
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 4.9e-47 191.4 138 67.4
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 3.2e-46 188.7 130 66.9
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 1.2e-45 186.8 120 70.0
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 2.1e-45 186.0 130 69.2
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 7.3e-43 177.6 155 59.4
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 4.0e-41 171.8 120 67.5
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 2.1e-37 159.5 124 63.7
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 1.1e-35 153.7 133 57.1
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 4.3e-35 151.8 127 55.9
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 6.2e-34 147.9 95 73.7
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 2.0e-32 142.9 126 59.5
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 4.5e-32 141.7 141 56.0
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 4.9e-31 138.3 136 53.7
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 8.4e-31 137.5 128 53.9
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 7.9e-29 131.0 83 74.7
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 6.9e-25 117.9 90 66.7
Duzib052G1224 Durio zibethinus HOM05D006894 ORTHO05D008724 5.5e-22 108.2 84 61.9
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 7.9e-21 104.4 130 45.4
unitig_749.g14127 Utricularia gibba HOM05D006894 ORTHO05D008724 1.5e-16 90.1 77 58.4
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 2.2e-10 69.7 71 53.5
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 2.8e-10 69.3 45 68.9
CAN.G798.10 Capsicum annuum HOM05D006894 ORTHO05D008724 2.4e-09 66.2 56 58.9
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 4.2e-06 55.5 31 77.4
CAN.G536.1 Capsicum annuum HOM05D006894 ORTHO05D000067 7.2e-06 54.7 29 75.9


User provided reference genes

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