Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc30.165 Carica papaya HOM05D000307 ORTHO05D000166 1.2e-52 209.5 104 100.0
Cpa.g.sc265.1 Carica papaya HOM05D000307 ORTHO05D000166 2.4e-40 168.7 94 90.4
Cpa.g.c25049.4 Carica papaya HOM05D000307 ORTHO05D000166 6.9e-40 167.2 94 89.4
Cpa.g.c28448.3 Carica papaya HOM05D000307 ORTHO05D000166 9.9e-39 163.3 94 88.3
Cpa.g.sc30.164 Carica papaya HOM05D000307 ORTHO05D000166 4.6e-36 154.5 102 78.4
Cpa.g.c38760 Carica papaya HOM05D000307 ORTHO05D000166 1.8e-35 152.5 94 83.0
Cpa.g.c33457.2 Carica papaya HOM05D000307 ORTHO05D000166 2.1e-33 145.6 83 86.7
Cpa.g.sc185.11 Carica papaya HOM05D000307 ORTHO05D000166 2.8e-33 145.2 86 83.7
Cpa.g.sc1750.2 Carica papaya HOM05D000307 ORTHO05D000166 2.9e-30 135.2 74 91.9
Cpa.g.c40499.1 Carica papaya HOM05D000307 ORTHO05D000166 1.6e-28 129.4 78 83.3
Cpa.g.sc265.5 Carica papaya HOM05D000307 ORTHO05D000166 1.6e-28 129.4 75 85.3
Cpa.g.sc30.163 Carica papaya HOM05D000307 ORTHO05D000166 3.1e-24 115.2 68 83.8
Cpa.g.c46342 Carica papaya HOM05D000307 ORTHO05D000166 6.9e-24 114.0 68 82.4
Cpa.g.sc139.40 Carica papaya HOM05D000307 ORTHO05D000166 6.9e-24 114.0 85 68.2
Cpa.g.sc135.3 Carica papaya HOM05D000307 ORTHO05D000166 1.2e-23 113.2 71 78.9
Cpa.g.c32899.2 Carica papaya HOM05D000307 ORTHO05D000166 2.0e-23 112.5 70 81.4
Cpa.g.sc265.3 Carica papaya HOM05D000307 ORTHO05D000166 7.2e-21 104.0 74 73.0
Cpa.g.sc265.6 Carica papaya HOM05D000307 ORTHO05D000166 7.2e-21 104.0 74 73.0
Cpa.g.sc44.14 Carica papaya HOM05D000307 ORTHO05D000166 9.3e-21 103.6 88 64.8
Cpa.g.c24608 Carica papaya HOM05D000307 ORTHO05D000166 4.6e-20 101.3 67 76.1
Cpa.g.c29396 Carica papaya HOM05D000307 ORTHO05D000166 7.9e-20 100.5 65 76.9
Ciclev10013728m.g Citrus clementina HOM05D000307 ORTHO05D000166 1.3e-14 83.2 92 51.1
Cpa.g.sc185.5 Carica papaya HOM05D000307 ORTHO05D000166 2.9e-14 82.0 74 59.5
Ciclev10006519m.g Citrus clementina HOM05D000307 ORTHO05D000166 4.2e-13 78.2 92 48.9
Cpa.g.c25253.4 Carica papaya HOM05D000307 ORTHO05D000166 1.2e-12 76.6 58 70.7
Cpa.g.c28448.1 Carica papaya HOM05D000307 ORTHO05D000166 2.7e-12 75.5 45 82.2
Cpa.g.c40915 Carica papaya HOM05D000307 ORTHO05D000166 4.6e-12 74.7 59 66.1
Cpa.g.sc185.14 Carica papaya HOM05D000307 ORTHO05D000166 1.4e-11 73.2 43 83.7
Cpa.g.c25253.2 Carica papaya HOM05D000307 ORTHO05D000166 8.8e-11 70.5 91 49.5
Cpa.g.sc5245.1 Carica papaya HOM05D000307 ORTHO05D000166 3.3e-10 68.6 32 100.0
Cpa.g.sc2248.1 Carica papaya HOM05D000307 ORTHO05D000166 1.3e-09 66.6 32 96.9
GSVIVG01031333001 Vitis vinifera HOM05D000307 ORTHO05D000166 1.3e-09 66.6 97 45.4
Manes.08G107300 Manihot esculenta HOM05D000307 ORTHO05D000166 2.2e-09 65.9 95 41.1
Duzib177G1026 Durio zibethinus HOM05D000307 ORTHO05D000166 4.8e-09 64.7 101 40.6
Prupe.1G533700 Prunus persica HOM05D000307 ORTHO05D000166 6.3e-09 64.3 89 47.2
QL03p011032 Quercus lobata HOM05D000307 ORTHO05D000166 6.3e-09 64.3 78 47.4
COL.COLO4_22983 Corchorus olitorius HOM05D000307 ORTHO05D000166 1.1e-08 63.5 41 65.9
Cpa.g.sc265.4 Carica papaya HOM05D000307 ORTHO05D000166 1.8e-08 62.8 37 83.8
QL03p011092 Quercus lobata HOM05D000307 ORTHO05D000166 1.8e-08 62.8 69 50.7
Duzib150G0239 Durio zibethinus HOM05D000307 ORTHO05D000166 2.4e-08 62.4 103 38.8
Atru.chr7.177 Acer truncatum HOM05D000307 ORTHO05D000166 3.1e-08 62.0 111 37.8
MD15G1387300 Malus domestica HOM05D000307 ORTHO05D000166 3.1e-08 62.0 110 40.9
Thecc.05G329800 Theobroma cacao HOM05D000307 ORTHO05D000166 3.1e-08 62.0 42 64.3
Cpa.g.sc220.11 Carica papaya HOM05D000307 ORTHO05D000166 4.1e-08 61.6 34 85.3
Cpa.g.sc34.38 Carica papaya HOM05D000307 ORTHO05D000166 6.9e-08 60.8 84 42.9
Cpa.g.sc34.39 Carica papaya HOM05D000307 ORTHO05D000166 6.9e-08 60.8 84 42.9
TWI75G1381 Tripterygium wilfordii HOM05D000307 ORTHO05D000166 9.1e-08 60.5 103 38.8
Cfa004392 Carpinus fangiana HOM05D000307 ORTHO05D000166 1.2e-07 60.1 100 44.0
Prupe.1G533600 Prunus persica HOM05D000307 ORTHO05D000166 1.2e-07 60.1 44 59.1
Potri.005G002400 Populus trichocarpa HOM05D000307 ORTHO05D000166 3.4e-07 58.5 42 64.3
ClCG03G017900 Citrullus lanatus HOM05D000307 ORTHO05D000166 4.5e-07 58.2 44 63.6
FAN02G0711 Fragaria x ananassa HOM05D000307 ORTHO05D000166 4.5e-07 58.2 40 65.0
Sabra13G0020900 Salix brachista HOM05D000307 ORTHO05D000166 4.5e-07 58.2 38 71.1
Sed0022320 Sechium edule HOM05D000307 ORTHO05D000166 4.5e-07 58.2 44 61.4
TWI39G0513 Tripterygium wilfordii HOM05D000307 ORTHO05D000166 4.5e-07 58.2 42 59.5
Potri.013G018100 Populus trichocarpa HOM05D000307 ORTHO05D000166 5.9e-07 57.8 39 64.1
Peaxi162Scf00487g00043 Petunia axillaris HOM05D000307 ORTHO05D000166 7.7e-07 57.4 41 65.9
TWI38G0721 Tripterygium wilfordii HOM05D000307 ORTHO05D000166 7.7e-07 57.4 96 41.7
MD08G1200100 Malus domestica HOM05D000307 ORTHO05D000166 1.0e-06 57.0 112 40.2
Peaxi162Scf00222g00046 Petunia axillaris HOM05D000307 ORTHO05D000166 1.0e-06 57.0 41 63.4
Peaxi162Scf00222g00424 Petunia axillaris HOM05D000307 ORTHO05D000166 1.0e-06 57.0 41 63.4
Peaxi162Scf00194g00005 Petunia axillaris HOM05D000307 ORTHO05D000166 1.7e-06 56.2 91 41.8
Solyc01g102260.3 Solanum lycopersicum HOM05D000307 ORTHO05D000166 1.7e-06 56.2 41 61.0
Sopen01g044720 Solanum pennellii HOM05D000307 ORTHO05D000166 1.7e-06 56.2 41 61.0
FvH4_6g43410 Fragaria vesca HOM05D000307 ORTHO05D000166 2.2e-06 55.8 39 64.1
FAN14G0127 Fragaria x ananassa HOM05D000307 ORTHO05D000166 2.2e-06 55.8 39 64.1
Atru.chr12.1732 Acer truncatum HOM05D000307 ORTHO05D000166 2.9e-06 55.5 108 33.3
Cpa.g.sc135.2 Carica papaya HOM05D000307 ORTHO05D000166 2.9e-06 55.5 32 81.2
Cc02_g35890 Coffea canephora HOM05D000307 ORTHO05D000166 2.9e-06 55.5 47 51.1
MELO3C015239.2 Cucumis melo HOM05D000307 ORTHO05D000166 2.9e-06 55.5 48 60.4
Lj5P318T22 Lonicera japonica HOM05D000307 ORTHO05D000166 2.9e-06 55.5 86 38.4
Thecc.10G045300 Theobroma cacao HOM05D000307 ORTHO05D000166 2.9e-06 55.5 42 57.1
Thecc.10G049500 Theobroma cacao HOM05D000307 ORTHO05D000166 3.8e-06 55.1 42 54.8
CAN.G1248.14 Capsicum annuum HOM05D000307 ORTHO05D000166 5.0e-06 54.7 97 37.1
Lj6g0024616 Lotus japonicus HOM05D000307 ORTHO05D000166 5.0e-06 54.7 45 55.6
Nn3g21966 Nelumbo nucifera HOM05D000307 ORTHO05D000166 5.0e-06 54.7 92 33.7
Nitab4.5_0001463g0160 Nicotiana tabacum HOM05D000307 ORTHO05D000166 5.0e-06 54.7 37 62.2
Prupe.6G304100 Prunus persica HOM05D000307 ORTHO05D000166 5.0e-06 54.7 105 37.1
RcHm_v2.0_Chr1g0321431 Rosa chinensis HOM05D000307 ORTHO05D000166 5.0e-06 54.7 52 51.9
Haze_15022 Corylus avellana HOM05D000307 ORTHO05D000166 8.5e-06 53.9 47 57.4
Nitab4.5_0000001g0140 Nicotiana tabacum HOM05D000307 ORTHO05D000166 8.5e-06 53.9 98 36.7
Nitab4.5_0000009g0060 Nicotiana tabacum HOM05D000307 ORTHO05D000166 8.5e-06 53.9 41 58.5


User provided reference genes

Program Settings