Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc3.91 Carica papaya HOM05D001081 ORTHO05D004708 4.1e-198 694.5 341 100.0
Cfa016233 Carpinus fangiana HOM05D001081 ORTHO05D004708 1.7e-103 380.2 299 64.2
Haze_00208 Corylus avellana HOM05D001081 ORTHO05D004708 3.8e-103 379.0 298 63.8
QL09p008772 Quercus lobata HOM05D001081 ORTHO05D004708 5.5e-102 375.2 282 66.3
Atru.chr12.2203 Acer truncatum HOM05D001081 ORTHO05D004708 6.7e-100 368.2 301 63.1
Manes.01G183500 Manihot esculenta HOM05D001081 ORTHO05D004708 3.7e-98 362.5 284 64.8
Eucgr.G00143 Eucalyptus grandis HOM05D001081 ORTHO05D004708 2.4e-97 359.8 296 60.8
Rhsim03G0209100 Rhododendron simsii HOM05D001081 ORTHO05D004708 2.6e-96 356.3 294 62.2
Ciclev10018477m.g Citrus clementina HOM05D001081 ORTHO05D004708 3.4e-96 355.9 348 54.9
Nn1g00260 Nelumbo nucifera HOM05D001081 ORTHO05D004708 1.1e-94 350.9 300 59.3
Sabra15G0067900 Salix brachista HOM05D001081 ORTHO05D004708 1.1e-94 350.9 282 65.6
Prupe.2G309600 Prunus persica HOM05D001081 ORTHO05D004708 1.4e-94 350.5 310 59.4
Lj1C1020T7 Lonicera japonica HOM05D001081 ORTHO05D004708 4.2e-94 349.0 327 57.5
Thecc.03G199500 Theobroma cacao HOM05D001081 ORTHO05D004708 1.2e-93 347.4 298 62.1
CANSAT21G2573 Cannabis sativa HOM05D001081 ORTHO05D004708 1.6e-93 347.1 302 58.9
Dinv35339 Davidia involucrata HOM05D001081 ORTHO05D004708 2.1e-93 346.7 309 58.3
Hma1.2p1_0404F.1_g145340 Hydrangea macrophylla HOM05D001081 ORTHO05D004708 7.9e-93 344.7 318 55.3
vmacro06386 Vaccinium macrocarpon HOM05D001081 ORTHO05D004708 7.9e-93 344.7 308 57.8
CANSAT21G0069 Cannabis sativa HOM05D001081 ORTHO05D004708 1.3e-92 344.0 302 58.6
Sabra15G0068100 Salix brachista HOM05D001081 ORTHO05D004708 3.9e-92 342.4 282 64.5
CANSAT21G1825 Cannabis sativa HOM05D001081 ORTHO05D004708 5.1e-92 342.0 283 62.2
Gorai.007G015700 Gossypium raimondii HOM05D001081 ORTHO05D004708 1.1e-91 340.9 316 58.2
Gohir.A11G015200 Gossypium hirsutum HOM05D001081 ORTHO05D004708 1.9e-91 340.1 316 57.9
TAR375G0280 Trochodendron aralioides HOM05D001081 ORTHO05D004708 3.3e-91 339.3 311 57.6
RcHm_v2.0_Chr1g0380531 Rosa chinensis HOM05D001081 ORTHO05D004708 4.3e-91 339.0 282 61.3
CSS0032097 Camellia sinensis var. sinensis HOM05D001081 ORTHO05D004708 5.7e-91 338.6 282 62.4
Gohir.D11G015300 Gossypium hirsutum HOM05D001081 ORTHO05D004708 9.6e-91 337.8 316 57.9
THA.LOC104798901 Tarenaya hassleriana HOM05D001081 ORTHO05D004708 1.6e-90 337.0 337 53.1
Glyma.17G128700 Glycine max HOM05D001081 ORTHO05D004708 4.8e-90 335.5 283 59.7
Lj4g0008522 Lotus japonicus HOM05D001081 ORTHO05D004708 8.2e-90 334.7 281 60.5
Lj1C1018T17 Lonicera japonica HOM05D001081 ORTHO05D004708 1.8e-89 333.6 320 56.6
Eucgr.H05016 Eucalyptus grandis HOM05D001081 ORTHO05D004708 2.0e-88 330.1 296 57.4
RcHm_v2.0_Chr1g0381531 Rosa chinensis HOM05D001081 ORTHO05D004708 2.6e-88 329.7 282 59.6
Eucgr.G00111 Eucalyptus grandis HOM05D001081 ORTHO05D004708 3.4e-88 329.3 296 57.1
Medtr1g008050 Medicago truncatula HOM05D001081 ORTHO05D004708 1.0e-87 327.8 281 59.1
FvH4_7g31550 Fragaria vesca HOM05D001081 ORTHO05D004708 1.7e-87 327.0 282 60.3
Actinidia08651 Actinidia chinensis HOM05D001081 ORTHO05D004708 2.9e-87 326.2 361 49.9
Ca_12791_v3 Cicer arietinum L. HOM05D001081 ORTHO05D004708 8.5e-87 324.7 281 59.8
Eucgr.G00092 Eucalyptus grandis HOM05D001081 ORTHO05D004708 2.7e-85 319.7 296 56.4
EL10Ac3g05278 Beta vulgaris HOM05D001081 ORTHO05D004708 6.1e-85 318.5 336 52.4
MD07G1288100 Malus domestica HOM05D001081 ORTHO05D004708 1.3e-84 317.4 269 59.5
A06p35020 Brassica napus HOM05D001081 ORTHO05D004708 3.0e-84 316.2 334 50.6
C07p43530 Brassica napus HOM05D001081 ORTHO05D004708 3.9e-84 315.8 334 50.6
BolC7t44880H Brassica oleracea HOM05D001081 ORTHO05D004708 3.9e-84 315.8 334 50.6
CARHR189220 Cardamine hirsuta HOM05D001081 ORTHO05D004708 1.6e-82 310.5 285 56.1
TPR.G12082 Trifolium pratense HOM05D001081 ORTHO05D004708 2.2e-82 310.1 300 54.3
vmacro22638 Vaccinium macrocarpon HOM05D001081 ORTHO05D004708 3.7e-82 309.3 303 56.1
Medtr1g007950 Medicago truncatula HOM05D001081 ORTHO05D004708 8.2e-82 308.1 287 57.5
Ah.07g205570 Amaranthus hybridus HOM05D001081 ORTHO05D004708 1.1e-81 307.8 353 47.0
AL6G35710 Arabidopsis lyrata HOM05D001081 ORTHO05D004708 1.4e-81 307.4 286 55.2
Carub.0006s2205 Capsella rubella HOM05D001081 ORTHO05D004708 1.4e-81 307.4 286 55.6
Psat6g034720 Pisum sativum HOM05D001081 ORTHO05D004708 1.8e-81 307.0 301 54.5
AUR62019407 Chenopodium quinoa HOM05D001081 ORTHO05D004708 2.4e-81 306.6 314 52.5
GSVIVG01038555001 Vitis vinifera HOM05D001081 ORTHO05D004708 2.4e-81 306.6 407 44.5
BraA06t26428Z Brassica rapa HOM05D001081 ORTHO05D004708 1.2e-80 304.3 283 56.5
Sopen03g022900 Solanum pennellii HOM05D001081 ORTHO05D004708 2.0e-80 303.5 342 50.9
PSO063G4550 Papaver somniferum HOM05D001081 ORTHO05D004708 3.4e-80 302.8 305 53.4
BcaNung01219 Brassica carinata HOM05D001081 ORTHO05D004708 4.5e-80 302.4 283 56.2
C07p43490 Brassica napus HOM05D001081 ORTHO05D004708 4.5e-80 302.4 283 56.2
BolC7t44875H Brassica oleracea HOM05D001081 ORTHO05D004708 4.5e-80 302.4 283 56.2
Thhalv10003512m.g Eutrema salsugineum HOM05D001081 ORTHO05D004708 1.7e-79 300.4 289 54.3
Aqoxy3G00072 Aquilegia oxysepala HOM05D001081 ORTHO05D004708 3.8e-79 299.3 287 57.1
AT5G24280 Arabidopsis thaliana HOM05D001081 ORTHO05D004708 3.8e-79 299.3 283 54.8
Hund21007 Selenicereus undatus HOM05D001081 ORTHO05D004708 6.5e-79 298.5 277 56.0
Nitab4.5_0000548g0110 Nicotiana tabacum HOM05D001081 ORTHO05D004708 7.2e-78 295.0 343 51.0
A06p35070 Brassica napus HOM05D001081 ORTHO05D004708 9.4e-78 294.7 308 51.9
Thhalv10003513m.g Eutrema salsugineum HOM05D001081 ORTHO05D004708 2.1e-77 293.5 337 49.0
BcaNung01806 Brassica carinata HOM05D001081 ORTHO05D004708 6.1e-77 292.0 340 47.9
MBI06_g13415_MAGBIO Magnolia biondii HOM05D001081 ORTHO05D004708 6.1e-77 292.0 301 54.8
ATR0602G075 Amborella trichopoda HOM05D001081 ORTHO05D004708 2.2e-74 283.5 300 49.3
SGA_v2.0_scaffold192G40538 Striga asiatica HOM05D001081 ORTHO05D004708 3.4e-72 276.2 305 48.2
Lsat_1_v5_gn_8_5261 Lactuca sativa HOM05D001081 ORTHO05D004708 7.7e-72 275.0 281 53.0
AUR62006087 Chenopodium quinoa HOM05D001081 ORTHO05D004708 3.2e-70 269.6 321 46.7
PSO781G0289 Papaver somniferum HOM05D001081 ORTHO05D004708 3.9e-68 262.7 309 47.9
CiPaw.06G046000 Carya illinoinensis HOM05D001081 ORTHO05D004708 2.8e-66 256.5 214 65.9
TWI39G0245 Tripterygium wilfordii HOM05D001081 ORTHO05D004708 6.3e-66 255.4 215 60.0
CARHR189240 Cardamine hirsuta HOM05D001081 ORTHO05D004708 5.9e-64 248.8 323 44.9
HanXRQChr08g0225341 Helianthus annuus HOM05D001081 ORTHO05D004708 1.3e-63 247.7 283 48.4
HanXRQChr08g0225291 Helianthus annuus HOM05D001081 ORTHO05D004708 2.9e-63 246.5 289 47.8
CARHR189250 Cardamine hirsuta HOM05D001081 ORTHO05D004708 8.5e-63 245.0 255 51.0
Hma1.2p1_0404F.1_g145380 Hydrangea macrophylla HOM05D001081 ORTHO05D004708 6.7e-60 235.3 210 54.8
FAN01G0187 Fragaria x ananassa HOM05D001081 ORTHO05D004708 2.6e-59 233.4 189 66.7
Cc02_g01510 Coffea canephora HOM05D001081 ORTHO05D004708 3.1e-57 226.5 459 35.3
BraA06t26425Z Brassica rapa HOM05D001081 ORTHO05D004708 5.3e-57 225.7 209 57.4
HanXRQChr08g0225301 Helianthus annuus HOM05D001081 ORTHO05D004708 1.6e-56 224.2 283 47.0
FAN06G1778 Fragaria x ananassa HOM05D001081 ORTHO05D004708 2.2e-55 220.3 177 67.2
FAN06G3553 Fragaria x ananassa HOM05D001081 ORTHO05D004708 2.2e-55 220.3 177 67.2
Lalb_Chr10g0091361 Lupinus albus HOM05D001081 ORTHO05D004708 6.5e-55 218.8 184 62.5
DCAR_008928 Daucus carota HOM05D001081 ORTHO05D004708 1.4e-52 211.1 275 43.3
HanXRQChr10g0291811 Helianthus annuus HOM05D001081 ORTHO05D004708 1.8e-52 210.7 179 65.4
SalBow4G1120 Salvia bowleyana HOM05D001081 ORTHO05D004708 2.3e-52 210.3 222 52.7
Aa31LG11G3510 Aethionema arabicum HOM05D001081 ORTHO05D004708 8.3e-50 201.8 201 57.2
SGA_v2.0_scaffold9G04846 Striga asiatica HOM05D001081 ORTHO05D004708 7.0e-49 198.7 226 53.5
Carub.0006s2203 Capsella rubella HOM05D001081 ORTHO05D004708 4.4e-43 179.5 189 52.4
Migut.F00209 Erythranthe guttata HOM05D001081 ORTHO05D004708 9.2e-41 171.8 130 66.9
Mapoly0076s0015 Marchantia polymorpha HOM05D001081 ORTHO05D004708 2.3e-39 167.2 291 38.1
FvH4_7g31511 Fragaria vesca HOM05D001081 ORTHO05D004708 5.0e-39 166.0 136 55.1
PSO170G6091 Papaver somniferum HOM05D001081 ORTHO05D004708 9.5e-38 161.8 233 41.2
CAN.G481.14 Capsicum annuum HOM05D001081 ORTHO05D004708 1.6e-37 161.0 209 45.5
Nitab4.5_0006933g0040 Nicotiana tabacum HOM05D001081 ORTHO05D004708 5.2e-36 156.0 209 45.9
Gohir.D11G256700 Gossypium hirsutum HOM05D001081 ORTHO05D010708 4.4e-35 152.9 145 57.2
Gorai.010G233200 Gossypium raimondii HOM05D001081 ORTHO05D010708 7.5e-35 152.1 145 56.6
Mapoly0111s0028 Marchantia polymorpha HOM05D001081 ORTHO05D004708 2.9e-34 150.2 276 34.8
Carub.0006s2204 Capsella rubella HOM05D001081 ORTHO05D024756 1.0e-31 141.7 156 48.1
SMO213G0001 Selaginella moellendorffii HOM05D001081 ORTHO05D004708 1.5e-30 137.9 193 40.4
AagrBONN_evm.TU.Sc2ySwM_117.3719 Anthoceros agrestis HOM05D001081 ORTHO05D004708 1.2e-29 134.8 296 34.5
AagrBONN_evm.TU.Sc2ySwM_228.1615 Anthoceros agrestis HOM05D001081 ORTHO05D004708 1.4e-28 131.3 294 31.6
Solyc03g083120.3 Solanum lycopersicum HOM05D001081 ORTHO05D024756 4.0e-28 129.8 162 45.7
AL6G35700 Arabidopsis lyrata HOM05D001081 ORTHO05D004708 7.5e-27 125.6 150 50.7
Migut.F00208 Erythranthe guttata HOM05D001081 ORTHO05D004708 8.3e-26 122.1 157 42.7
Potri.012G016100 Populus trichocarpa HOM05D001081 ORTHO05D004708 1.6e-24 117.9 74 77.0
Peaxi162Scf00740g00140 Petunia axillaris HOM05D001081 ORTHO05D024756 1.5e-22 111.3 166 39.8
Gorai.011G131700 Gossypium raimondii HOM05D001081 ORTHO05D004708 6.8e-20 102.4 109 53.2
Lsat_1_v5_gn_9_3381 Lactuca sativa HOM05D001081 ORTHO05D004708 5.8e-19 99.4 81 64.2
COL.COLO4_16768 Corchorus olitorius HOM05D001081 ORTHO05D004708 1.7e-18 97.8 79 65.8
Lalb_Chr10g0091351 Lupinus albus HOM05D001081 ORTHO05D004708 6.4e-18 95.9 123 41.5
TWI39G0445 Tripterygium wilfordii HOM05D001081 ORTHO05D004708 2.7e-16 90.5 95 52.6
SEGI_15117 Sequoiadendron giganteum HOM05D001081 ORTHO05D004708 3.3e-14 83.6 150 32.0
Hma1.2p1_0013F.1_g008960 Hydrangea macrophylla HOM05D001081 ORTHO05D004708 1.2e-13 81.6 47 78.7
Sopen03g019380 Solanum pennellii HOM05D001081 ORTHO05D029255 2.1e-13 80.9 100 46.0
Actinidia04725 Actinidia chinensis HOM05D001081 ORTHO05D004708 1.8e-12 77.8 84 51.2
Pp3c22_17807 Physcomitrium patens HOM05D001081 ORTHO05D004708 2.0e-11 74.3 133 36.1
Lsat_1_v5_gn_6_63561 Lactuca sativa HOM05D001081 ORTHO05D004708 7.6e-11 72.4 57 68.4
Actinidia27675 Actinidia chinensis HOM05D001081 ORTHO05D004708 2.9e-10 70.5 73 54.8
Aqoxy4G01594 Aquilegia oxysepala HOM05D001081 ORTHO05D004708 2.9e-10 70.5 85 45.9
CARHR214910 Cardamine hirsuta HOM05D001081 ORTHO05D043476 3.3e-06 57.0 61 41.0
HanXRQChr06g0165641 Helianthus annuus HOM05D001081 ORTHO05D024756 9.6e-06 55.5 37 70.3
HanXRQChr08g0231511 Helianthus annuus HOM05D001081 ORTHO05D024756 9.6e-06 55.5 37 70.3


User provided reference genes

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