Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc3.49 Carica papaya HOM05D002584 ORTHO05D002736 2.5e-273 944.9 487 100.0
QL09p010995 Quercus lobata HOM05D002584 ORTHO05D002736 3.3e-60 236.9 520 36.5
Haze_00110 Corylus avellana HOM05D002584 ORTHO05D002736 4.0e-58 229.9 538 35.1
Cfa016361 Carpinus fangiana HOM05D002584 ORTHO05D002736 3.4e-57 226.9 507 36.1
GSVIVG01028743001 Vitis vinifera HOM05D002584 ORTHO05D002736 1.6e-51 208.0 565 33.6
Manes.06G157000 Manihot esculenta HOM05D002584 ORTHO05D002736 8.2e-51 205.7 523 32.9
Duzib205G0163 Durio zibethinus HOM05D002584 ORTHO05D002736 2.6e-49 200.7 518 34.0
Prupe.2G307000 Prunus persica HOM05D002584 ORTHO05D002736 2.7e-46 190.7 504 33.7
Haze_00109 Corylus avellana HOM05D002584 ORTHO05D002736 1.0e-45 188.7 431 35.5
Thecc.03G192600 Theobroma cacao HOM05D002584 ORTHO05D002736 1.1e-44 185.3 536 31.3
Gorai.008G270900 Gossypium raimondii HOM05D002584 ORTHO05D002736 4.1e-42 176.8 506 31.0
FAN06G3312 Fragaria x ananassa HOM05D002584 ORTHO05D002736 4.5e-41 173.3 496 32.9
FvH4_7g31000 Fragaria vesca HOM05D002584 ORTHO05D002736 7.7e-41 172.6 496 33.5
FAN06G1680 Fragaria x ananassa HOM05D002584 ORTHO05D002736 2.9e-40 170.6 496 33.3
RcHm_v2.0_Chr1g0380081 Rosa chinensis HOM05D002584 ORTHO05D002736 3.8e-40 170.2 532 30.5
FAN01G3133 Fragaria x ananassa HOM05D002584 ORTHO05D002736 5.0e-40 169.9 487 32.9
MD07G1284800 Malus domestica HOM05D002584 ORTHO05D002736 6.5e-40 169.5 519 30.6
Dinv28338 Davidia involucrata HOM05D002584 ORTHO05D002736 8.5e-40 169.1 502 33.7
Gohir.D12G253600 Gossypium hirsutum HOM05D002584 ORTHO05D002736 1.9e-39 167.9 507 30.2
Gohir.D12G252800 Gossypium hirsutum HOM05D002584 ORTHO05D002736 3.6e-38 163.7 501 29.7
CiPaw.05G257900 Carya illinoinensis HOM05D002584 ORTHO05D002736 1.0e-37 162.2 513 29.8
Gohir.A12G251900 Gossypium hirsutum HOM05D002584 ORTHO05D002736 1.8e-37 161.4 505 30.1
FAN03G2222 Fragaria x ananassa HOM05D002584 ORTHO05D002736 2.6e-36 157.5 482 32.2
FAN10G3352 Fragaria x ananassa HOM05D002584 ORTHO05D002736 8.2e-35 152.5 497 32.6
FAN10G3419 Fragaria x ananassa HOM05D002584 ORTHO05D002736 8.2e-35 152.5 497 32.6
MD01G1215100 Malus domestica HOM05D002584 ORTHO05D002736 3.1e-34 150.6 516 30.8
Potri.015G022500 Populus trichocarpa HOM05D002584 ORTHO05D002736 1.5e-33 148.3 482 30.3
CANSAT21G0945 Cannabis sativa HOM05D002584 ORTHO05D002736 4.2e-31 140.2 478 31.0
TWI14G1284 Tripterygium wilfordii HOM05D002584 ORTHO05D002736 9.4e-31 139.0 512 30.3
Sabra15G0016800 Salix brachista HOM05D002584 ORTHO05D002736 8.0e-30 136.0 484 30.2
Lj1g0015870 Lotus japonicus HOM05D002584 ORTHO05D002736 8.8e-29 132.5 517 27.1
COL.COLO4_35658 Corchorus olitorius HOM05D002584 ORTHO05D002736 2.6e-28 131.0 560 26.8
Cfa016360 Carpinus fangiana HOM05D002584 ORTHO05D002736 2.4e-26 124.4 524 28.1
Atru.chr1.263 Acer truncatum HOM05D002584 ORTHO05D002736 5.3e-26 123.2 474 29.3
MELO3C026935.2 Cucumis melo HOM05D002584 ORTHO05D002736 7.2e-23 112.8 490 28.8
MSTRG.8680 Avicennia marina HOM05D002584 ORTHO05D002736 9.4e-23 112.5 525 27.8
Rhsim03G0198700 Rhododendron simsii HOM05D002584 ORTHO05D002736 2.7e-22 110.9 516 27.9
Nn1g01811 Nelumbo nucifera HOM05D002584 ORTHO05D002736 8.0e-22 109.4 386 28.0
Nitab4.5_0000473g0110 Nicotiana tabacum HOM05D002584 ORTHO05D002736 8.0e-22 109.4 469 28.4
Sed0015947 Sechium edule HOM05D002584 ORTHO05D002736 1.0e-21 109.0 499 28.9
Nitab4.5_0002589g0030 Nicotiana tabacum HOM05D002584 ORTHO05D002736 3.0e-21 107.5 476 26.7
ClCG05G008700 Citrullus lanatus HOM05D002584 ORTHO05D002736 1.2e-20 105.5 415 26.7
Glyma.13G040000 Glycine max HOM05D002584 ORTHO05D002736 1.2e-20 105.5 488 26.8
Cc02_g01900 Coffea canephora HOM05D002584 ORTHO05D002736 1.7e-19 101.7 481 27.2
Peaxi162Scf00904g00320 Petunia axillaris HOM05D002584 ORTHO05D002736 6.3e-19 99.8 466 28.1
PGR142G0759 Punica granatum HOM05D002584 ORTHO05D002736 2.4e-18 97.8 464 26.9
Lj1A1012T85 Lonicera japonica HOM05D002584 ORTHO05D002736 4.1e-18 97.1 279 31.2
Lj1P1012T81 Lonicera japonica HOM05D002584 ORTHO05D002736 5.3e-18 96.7 235 33.6
arahy.Tifrunner.gnm1.ann1.PZ4M2K Arachis hypogaea HOM05D002584 ORTHO05D002736 3.5e-17 94.0 422 27.5
DCAR_020304 Daucus carota HOM05D000007 ORTHO05D000017 2.9e-16 90.9 382 27.2
Eucgr.K00328 Eucalyptus grandis HOM05D002584 ORTHO05D002736 8.5e-16 89.4 409 26.4
SalBow4G3348 Salvia bowleyana HOM05D002584 ORTHO05D002736 8.5e-16 89.4 490 25.7
Phvul.009G137300 Phaseolus vulgaris HOM05D002584 ORTHO05D002736 2.5e-15 87.8 415 27.0
TAR375G0150 Trochodendron aralioides HOM05D002584 ORTHO05D002736 3.2e-15 87.4 541 27.2
Actinidia34198 Actinidia chinensis HOM05D002584 ORTHO05D002736 3.6e-14 84.0 395 25.6
VMungo1309G2151 Vigna mungo HOM05D002584 ORTHO05D002736 4.7e-14 83.6 417 25.9
Lalb_Chr08g0240591 Lupinus albus HOM05D002584 ORTHO05D002736 2.3e-13 81.3 161 35.4
Atru.chr1.259 Acer truncatum HOM05D002584 ORTHO05D002736 3.0e-13 80.9 122 44.3
MBI06_g22400_MAGBIO Magnolia biondii HOM05D002584 ORTHO05D002736 5.2e-13 80.1 488 25.4
PGSC0003DMG400009100 Solanum tuberosum HOM05D002584 ORTHO05D002736 5.2e-13 80.1 479 23.6
Lj1g0020480 Lotus japonicus HOM05D002584 ORTHO05D002736 4.4e-12 77.0 507 24.1
vmacro06576 Vaccinium macrocarpon HOM05D002584 ORTHO05D002736 5.7e-12 76.6 462 26.0
Hund04830 Selenicereus undatus HOM05D002584 ORTHO05D002736 1.3e-11 75.5 366 29.0
Sopen03g003380 Solanum pennellii HOM05D002584 ORTHO05D002736 4.8e-11 73.6 496 24.8
Oeu060971.1 Olea europaea HOM05D002584 ORTHO05D002736 8.3e-11 72.8 391 25.8
Aa31LG3G2620 Aethionema arabicum HOM05D002584 ORTHO05D002736 1.4e-10 72.0 168 29.8
Ciclev10004699m.g Citrus clementina HOM05D002584 ORTHO05D002736 1.4e-10 72.0 425 26.8
arahy.Tifrunner.gnm1.ann1.84BZB4 Arachis hypogaea HOM05D002584 ORTHO05D002736 2.4e-10 71.2 383 26.6
Duzib068G1380 Durio zibethinus HOM05D002584 ORTHO05D002736 4.1e-10 70.5 157 35.7
Medtr1g028620 Medicago truncatula HOM05D002584 ORTHO05D002736 1.2e-09 68.9 198 33.8
Solyc03g007420.3 Solanum lycopersicum HOM05D002584 ORTHO05D002736 3.5e-09 67.4 459 24.8
CARHR266290 Cardamine hirsuta HOM05D002584 ORTHO05D002736 4.5e-09 67.0 162 30.9
Aqoxy4G01959 Aquilegia oxysepala HOM05D017417 ORTHO05D013443 5.9e-09 66.6 149 30.2
Atru.chr1.260 Acer truncatum HOM05D002584 ORTHO05D002736 1.3e-08 65.5 110 35.5
Aqoxy4G01958 Aquilegia oxysepala HOM05D017417 ORTHO05D013443 1.9e-07 61.6 157 28.7
EL10Ac3g05348 Beta vulgaris HOM05D002584 ORTHO05D002736 1.9e-07 61.6 491 24.2
Sp6g15400 Schrenkiella parvula HOM05D002584 ORTHO05D002736 3.3e-07 60.8 484 23.6
BcaB01g04236 Brassica carinata HOM05D002584 ORTHO05D002736 6.1e-06 56.6 362 24.9
Dinv38860 Davidia involucrata HOM05D002584 ORTHO05D002736 6.1e-06 56.6 178 27.5
PSO782G2314 Papaver somniferum HOM05D057720 ORTHO05D013443 6.1e-06 56.6 148 29.1


User provided reference genes

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