Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc3.461 Carica papaya HOM05D000187 ORTHO05D000230 4.0e-103 378.3 211 100.0
Atru.chr9.914 Acer truncatum HOM05D000187 ORTHO05D000230 8.4e-45 184.5 206 62.6
Thecc.03G042900 Theobroma cacao HOM05D000187 ORTHO05D000230 1.4e-44 183.7 237 56.1
Duzib205G0431 Durio zibethinus HOM05D000187 ORTHO05D000230 8.7e-42 174.5 227 57.7
Glyma.08G049400 Glycine max HOM05D000187 ORTHO05D000230 5.7e-41 171.8 209 53.6
VMungo0251G2579 Vigna mungo HOM05D000187 ORTHO05D000230 2.2e-40 169.9 220 53.2
Prupe.5G225100 Prunus persica HOM05D000187 ORTHO05D000230 2.8e-40 169.5 214 54.7
Glyma.05G241900 Glycine max HOM05D000187 ORTHO05D000230 4.1e-39 165.6 206 52.9
Phvul.002G325200 Phaseolus vulgaris HOM05D000187 ORTHO05D000230 1.2e-38 164.1 219 51.1
QL10p026760 Quercus lobata HOM05D000187 ORTHO05D000230 1.3e-37 160.6 219 56.2
MELO3C002110.2 Cucumis melo HOM05D000187 ORTHO05D000230 3.8e-37 159.1 205 51.2
Duzib084G0101 Durio zibethinus HOM05D000187 ORTHO05D000230 6.5e-37 158.3 230 53.0
CsaV3_1G006940 Cucumis sativus L. HOM05D000187 ORTHO05D000230 8.5e-37 157.9 205 51.2
Duzib068G0915 Durio zibethinus HOM05D000187 ORTHO05D000230 1.9e-36 156.8 238 51.7
RcHm_v2.0_Chr7g0179401 Rosa chinensis HOM05D000187 ORTHO05D000230 3.2e-36 156.0 224 49.6
CSS0000068 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D000230 7.2e-36 154.8 205 54.6
Hma1.2p1_2594F.1_g325080 Hydrangea macrophylla HOM05D000187 ORTHO05D000230 1.8e-34 150.2 209 49.8
Gorai.001G067700 Gossypium raimondii HOM05D000187 ORTHO05D000230 6.7e-34 148.3 255 49.4
Manes.01G015300 Manihot esculenta HOM05D000187 ORTHO05D000230 1.1e-33 147.5 234 46.2
Sed0018606 Sechium edule HOM05D000187 ORTHO05D000230 2.5e-33 146.4 193 49.7
CSS0006855 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D000230 7.4e-33 144.8 204 52.5
Gohir.A07G059400 Gossypium hirsutum HOM05D000187 ORTHO05D000230 9.7e-33 144.4 234 52.1
Gohir.D07G064200 Gossypium hirsutum HOM05D000187 ORTHO05D000230 9.7e-33 144.4 257 48.2
ClCG04G010890 Citrullus lanatus HOM05D000187 ORTHO05D000230 1.3e-32 144.1 205 49.3
Lj4g0024779 Lotus japonicus HOM05D000187 ORTHO05D000230 1.3e-32 144.1 216 47.2
Lj5A153T49 Lonicera japonica HOM05D000187 ORTHO05D000230 2.8e-32 142.9 207 50.7
FAN04G1576 Fragaria x ananassa HOM05D000187 ORTHO05D000230 8.2e-32 141.4 220 47.3
Nn4g23961 Nelumbo nucifera HOM05D000187 ORTHO05D000230 8.2e-32 141.4 203 46.3
FAN08G2200 Fragaria x ananassa HOM05D000187 ORTHO05D000230 1.1e-31 141.0 207 47.8
Dinv17509 Davidia involucrata HOM05D000187 ORTHO05D000230 2.4e-31 139.8 212 50.0
Nn3g17958 Nelumbo nucifera HOM05D000187 ORTHO05D000230 3.1e-31 139.4 197 47.7
Aa31LG4G4090 Aethionema arabicum HOM05D000187 ORTHO05D000230 4.1e-31 139.0 228 50.4
THA.LOC104812152 Tarenaya hassleriana HOM05D000187 ORTHO05D000230 4.1e-31 139.0 233 49.8
Phvul.004G153501 Phaseolus vulgaris HOM05D000187 ORTHO05D000230 5.3e-31 138.7 184 47.8
Potri.012G053800 Populus trichocarpa HOM05D000187 ORTHO05D000230 5.3e-31 138.7 211 48.3
Dinv12227 Davidia involucrata HOM05D000187 ORTHO05D000230 1.5e-30 137.1 211 45.5
Lalb_Chr09g0330701 Lupinus albus HOM05D000187 ORTHO05D000230 1.5e-30 137.1 205 45.9
TWI81G0466 Tripterygium wilfordii HOM05D000187 ORTHO05D000230 1.5e-30 137.1 216 52.8
Sabra12G0037600 Salix brachista HOM05D000187 ORTHO05D000230 2.0e-30 136.7 212 47.6
MD06G1220700 Malus domestica HOM05D000187 ORTHO05D000230 2.6e-30 136.3 208 51.9
CiPaw.16G089300 Carya illinoinensis HOM05D000187 ORTHO05D000230 3.4e-30 136.0 223 46.6
VMungo0464G0328 Vigna mungo HOM05D000187 ORTHO05D000230 5.9e-30 135.2 185 49.2
FAN18G3138 Fragaria x ananassa HOM05D000187 ORTHO05D000230 7.7e-30 134.8 222 46.4
Cfa019728 Carpinus fangiana HOM05D000187 ORTHO05D000230 1.0e-29 134.4 224 49.6
FAN13G0080 Fragaria x ananassa HOM05D000187 ORTHO05D000230 1.0e-29 134.4 222 45.9
MD14G1230200 Malus domestica HOM05D000187 ORTHO05D000230 1.0e-29 134.4 215 50.2
AT1G73760 Arabidopsis thaliana HOM05D000187 ORTHO05D000230 1.3e-29 134.0 210 47.6
Manes.05G133100 Manihot esculenta HOM05D000187 ORTHO05D000230 1.3e-29 134.0 222 45.9
TPR.G28409 Trifolium pratense HOM05D000187 ORTHO05D000230 1.3e-29 134.0 197 48.7
FvH4_5g16700 Fragaria vesca HOM05D000187 ORTHO05D000230 3.8e-29 132.5 218 49.1
TAR535G0001 Trochodendron aralioides HOM05D000187 ORTHO05D000230 6.5e-29 131.7 206 49.0
Actinidia18917 Actinidia chinensis HOM05D000187 ORTHO05D000230 8.5e-29 131.3 204 52.0
Sp5g28950 Schrenkiella parvula HOM05D000187 ORTHO05D000230 1.4e-28 130.6 215 48.8
Lalb_Chr14g0370951 Lupinus albus HOM05D000187 ORTHO05D000230 3.2e-28 129.4 198 48.5
CARHR066830 Cardamine hirsuta HOM05D000187 ORTHO05D000230 4.2e-28 129.0 214 44.9
Thhalv10018747m.g Eutrema salsugineum HOM05D000187 ORTHO05D000230 4.2e-28 129.0 205 49.8
Carub.0002s2051 Capsella rubella HOM05D000187 ORTHO05D000230 1.6e-27 127.1 211 48.8
TAR622G0266 Trochodendron aralioides HOM05D000187 ORTHO05D000230 7.9e-27 124.8 204 42.6
Glyma.09G180300 Glycine max HOM05D000187 ORTHO05D000230 1.4e-26 124.0 198 50.5
Medtr8g106240 Medicago truncatula HOM05D000187 ORTHO05D000230 1.8e-26 123.6 206 46.6
AL2G33570 Arabidopsis lyrata HOM05D000187 ORTHO05D000230 3.9e-26 122.5 208 44.2
Lj2g0003886 Lotus japonicus HOM05D000187 ORTHO05D000230 3.9e-26 122.5 205 46.3
arahy.Tifrunner.gnm1.ann1.P10SDX Arachis hypogaea HOM05D000187 ORTHO05D000230 5.1e-26 122.1 206 44.7
TWI60G1712 Tripterygium wilfordii HOM05D000187 ORTHO05D000230 5.1e-26 122.1 209 51.7
Aqoxy3G00194 Aquilegia oxysepala HOM05D000187 ORTHO05D000230 6.7e-26 121.7 185 52.4
Nitab4.5_0006894g0010 Nicotiana tabacum HOM05D000187 ORTHO05D000230 1.1e-25 120.9 232 47.8
Aa31LG7G3050 Aethionema arabicum HOM05D000187 ORTHO05D000230 1.5e-25 120.6 217 49.3
Hund02352 Selenicereus undatus HOM05D000187 ORTHO05D000230 2.6e-25 119.8 199 48.7
Psat7g005520 Pisum sativum HOM05D000187 ORTHO05D000230 3.3e-25 119.4 202 45.5
Eucgr.B00829 Eucalyptus grandis HOM05D000187 ORTHO05D000230 4.4e-25 119.0 211 48.8
Sp1g16030 Schrenkiella parvula HOM05D000187 ORTHO05D000230 4.4e-25 119.0 205 46.8
Ca_17238_v3 Cicer arietinum L. HOM05D000187 ORTHO05D000230 1.3e-24 117.5 194 47.4
Potri.015G043900 Populus trichocarpa HOM05D000187 ORTHO05D000230 1.7e-24 117.1 212 45.8
arahy.Tifrunner.gnm1.ann1.35GK0Y Arachis hypogaea HOM05D000187 ORTHO05D000230 2.8e-24 116.3 208 43.8
vmacro16433 Vaccinium macrocarpon HOM05D000187 ORTHO05D000230 2.8e-24 116.3 204 44.6
CANSAT11G0889 Cannabis sativa HOM05D000187 ORTHO05D000230 3.7e-24 115.9 127 58.3
TPR.G12745 Trifolium pratense HOM05D000187 ORTHO05D000230 3.7e-24 115.9 220 47.3
Sabra15G0041300 Salix brachista HOM05D001562 ORTHO05D000230 4.8e-24 115.5 202 43.6
Nitab4.5_0001456g0140 Nicotiana tabacum HOM05D000187 ORTHO05D000230 1.1e-23 114.4 222 47.7
Lalb_Chr16g0387321 Lupinus albus HOM05D000187 ORTHO05D000230 1.4e-23 114.0 193 51.8
PGR083G2722 Punica granatum HOM05D000187 ORTHO05D000230 4.1e-23 112.5 211 40.3
CiPaw.15G135800 Carya illinoinensis HOM05D000187 ORTHO05D000230 1.2e-22 110.9 219 44.3
Psat1g035040 Pisum sativum HOM05D000187 ORTHO05D000230 3.5e-22 109.4 204 42.6
Ah.11g045140 Amaranthus hybridus HOM05D000187 ORTHO05D000230 7.7e-22 108.2 207 46.9
BcaB03g15727 Brassica carinata HOM05D000187 ORTHO05D000230 7.7e-22 108.2 207 44.4
Hma1.2p1_1283F.1_g272850 Hydrangea macrophylla HOM05D000187 ORTHO05D000230 7.7e-22 108.2 183 44.8
BolC6t38499H Brassica oleracea HOM05D000187 ORTHO05D000230 1.0e-21 107.8 199 42.7
Carub.0001s1767 Capsella rubella HOM05D000187 ORTHO05D000230 1.3e-21 107.5 209 43.1
Sopen03g037790 Solanum pennellii HOM05D000187 ORTHO05D000230 2.2e-21 106.7 232 45.3
Solyc03g118840.3 Solanum lycopersicum HOM05D000187 ORTHO05D000230 2.9e-21 106.3 232 44.0
C06p33860 Brassica napus HOM05D000187 ORTHO05D000230 6.5e-21 105.1 199 42.7
BolC8t49464H Brassica oleracea HOM05D000187 ORTHO05D000230 6.5e-21 105.1 205 45.9
Cc04_g06840 Coffea canephora HOM05D000187 ORTHO05D000230 8.5e-21 104.8 238 42.9
DCAR_023221 Daucus carota HOM05D000187 ORTHO05D000230 1.5e-20 104.0 189 41.3
C08p18300 Brassica napus HOM05D000187 ORTHO05D000230 3.2e-20 102.8 205 42.9
A08p30610 Brassica napus HOM05D000187 ORTHO05D000230 4.2e-20 102.4 206 45.6
Peaxi162Scf00683g00346 Petunia axillaris HOM05D000187 ORTHO05D000230 4.2e-20 102.4 203 43.8
EL10Ac5g11483 Beta vulgaris HOM05D000187 ORTHO05D000230 5.5e-20 102.1 196 45.9
Lsat_1_v5_gn_8_142020 Lactuca sativa HOM05D000187 ORTHO05D000230 5.5e-20 102.1 199 44.2
AL1G30330 Arabidopsis lyrata HOM05D000187 ORTHO05D000230 2.1e-19 100.1 196 42.3
HanXRQChr17g0559771 Helianthus annuus HOM05D000187 ORTHO05D000230 2.7e-19 99.8 198 47.0
BolC6t39826H Brassica oleracea HOM05D000187 ORTHO05D000230 3.6e-19 99.4 196 44.4
BcaB03g15081 Brassica carinata HOM05D000187 ORTHO05D000230 8.0e-19 98.2 197 39.6
C06p47910 Brassica napus HOM05D000187 ORTHO05D000230 8.0e-19 98.2 196 43.9
A07p39620 Brassica napus HOM05D000187 ORTHO05D000230 1.0e-18 97.8 195 44.1
BraA07t31511Z Brassica rapa HOM05D000187 ORTHO05D000230 1.0e-18 97.8 195 44.1
Migut.D01604 Erythranthe guttata HOM05D000187 ORTHO05D000230 1.0e-18 97.8 223 40.4
arahy.Tifrunner.gnm1.ann1.UBBI2A Arachis hypogaea HOM05D000187 ORTHO05D000230 1.4e-18 97.4 191 38.2
MSTRG.9274 Avicennia marina HOM05D000187 ORTHO05D000230 1.8e-18 97.1 213 39.9
Ciclev10020624m.g Citrus clementina HOM05D000187 ORTHO05D000230 1.8e-18 97.1 136 55.1
Thhalv10007935m.g Eutrema salsugineum HOM05D000187 ORTHO05D000230 3.0e-18 96.3 204 39.2
Ca_25470_v3 Cicer arietinum L. HOM05D000187 ORTHO05D000230 4.0e-18 95.9 197 39.6
Peaxi162Scf01127g00032 Petunia axillaris HOM05D000187 ORTHO05D000230 4.0e-18 95.9 207 45.9
Sc04g0003340 Simmondsia chinensis HOM05D000187 ORTHO05D000230 4.0e-18 95.9 218 43.6
BraA08t34992Z Brassica rapa HOM05D000187 ORTHO05D000230 5.2e-18 95.5 204 44.1
Glyma.07G097700 Glycine max HOM05D000187 ORTHO05D000230 1.5e-17 94.0 196 39.3
Nitab4.5_0000150g0050 Nicotiana tabacum HOM05D000187 ORTHO05D000230 3.3e-17 92.8 198 42.9
PSO478G0597 Papaver somniferum HOM05D000187 ORTHO05D000230 4.4e-17 92.4 204 36.8
COL.COLO4_38531 Corchorus olitorius HOM05D000187 ORTHO05D000230 5.7e-17 92.0 108 57.4
Medtr6g082620 Medicago truncatula HOM05D000187 ORTHO05D000230 5.7e-17 92.0 203 37.9
A07p29680 Brassica napus HOM05D000187 ORTHO05D000230 7.5e-17 91.7 189 37.0
BraA07t30608Z Brassica rapa HOM05D000187 ORTHO05D000230 7.5e-17 91.7 188 37.2
PSO017G0577 Papaver somniferum HOM05D000187 ORTHO05D000230 1.7e-16 90.5 194 36.6
arahy.Tifrunner.gnm1.ann1.X8S18P Arachis hypogaea HOM05D000187 ORTHO05D000230 4.8e-16 89.0 212 36.3
arahy.Tifrunner.gnm1.ann1.FY93PX Arachis hypogaea HOM05D006836 ORTHO05D000230 4.1e-15 85.9 168 41.1
Sed0023942 Sechium edule HOM05D000187 ORTHO05D000230 9.1e-15 84.7 190 38.4
Hma1.2p1_1596F.1_g292790 Hydrangea macrophylla HOM05D000187 ORTHO05D000230 2.6e-14 83.2 104 55.8
PGSC0003DMG400005742 Solanum tuberosum HOM05D000187 ORTHO05D000230 3.5e-14 82.8 231 40.3
Hma1.2p1_0942F.1_g239780 Hydrangea macrophylla HOM05D000187 ORTHO05D000230 5.9e-14 82.0 104 54.8
Lalb_Chr24g0397961 Lupinus albus HOM05D000187 ORTHO05D000230 5.9e-14 82.0 197 44.2
AT1G17970 Arabidopsis thaliana HOM05D000187 ORTHO05D000230 1.3e-13 80.9 200 39.5
CARHR018580 Cardamine hirsuta HOM05D000187 ORTHO05D000230 1.3e-13 80.9 196 35.7
Dinv16139 Davidia involucrata HOM05D000187 ORTHO05D000230 1.3e-13 80.9 180 34.4
Actinidia35102 Actinidia chinensis HOM05D000187 ORTHO05D000230 2.2e-13 80.1 180 42.2
Hma1.2p1_0341F.1_g130520 Hydrangea macrophylla HOM05D000187 ORTHO05D000230 2.9e-13 79.7 104 53.8
Rhsim08G0130200 Rhododendron simsii HOM05D000187 ORTHO05D000230 1.1e-12 77.8 200 41.5
Oeu000988.1 Olea europaea HOM05D000187 ORTHO05D000230 1.6e-11 73.9 204 35.8
MBI09_g25153_MAGBIO Magnolia biondii HOM05D000187 ORTHO05D000230 2.1e-11 73.6 133 45.9
Nn4g24692 Nelumbo nucifera HOM05D000187 ORTHO05D000230 2.7e-11 73.2 119 40.3
TAR374G1571 Trochodendron aralioides HOM05D000187 ORTHO05D000230 4.7e-11 72.4 137 37.2
Nitab4.5_0004703g0060 Nicotiana tabacum HOM05D000187 ORTHO05D000230 2.3e-10 70.1 123 39.8
TAR374G0613 Trochodendron aralioides HOM05D000187 ORTHO05D000230 2.3e-10 70.1 137 36.5
Oeu017512.1 Olea europaea HOM05D000187 ORTHO05D000230 5.7e-09 65.5 151 38.4
GSVIVG01008343001 Vitis vinifera HOM05D000187 ORTHO05D000230 9.8e-09 64.7 50 66.0
Hma1.2p1_1614F.1_g293660 Hydrangea macrophylla HOM05D000187 ORTHO05D000230 1.3e-08 64.3 52 63.5
CDE08G0213 Ceratophyllum demersum HOM05D000187 ORTHO05D000230 2.8e-08 63.2 163 33.1
Rhsim12G0141500 Rhododendron simsii HOM05D000187 ORTHO05D000230 9.1e-07 58.2 66 50.0
SGA_v2.0_scaffold168G38479 Striga asiatica HOM05D000187 ORTHO05D000230 2.0e-06 57.0 107 41.1
HPP92_023401 Vanilla planifolia HOM05D006034 ORTHO05D007535 2.7e-06 56.6 153 31.4
vmacro17698 Vaccinium macrocarpon HOM05D000187 ORTHO05D000230 5.9e-06 55.5 171 41.5
VMungo1309G0166 Vigna mungo HOM05D000680 ORTHO05D000230 7.7e-06 55.1 65 56.9


User provided reference genes

Program Settings