Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc3.442 Carica papaya HOM05D006376 ORTHO05D008046 1.8e-204 715.7 356 100.0
GSVIVG01008377001 Vitis vinifera HOM05D006376 ORTHO05D008046 3.2e-89 332.8 240 69.2
Manes.14G168100 Manihot esculenta HOM05D006376 ORTHO05D008046 9.4e-89 331.3 293 63.8
Prupe.5G228200 Prunus persica HOM05D006376 ORTHO05D008046 1.6e-88 330.5 265 64.5
CiPaw.15G138400 Carya illinoinensis HOM05D006376 ORTHO05D008046 4.7e-88 328.9 268 65.7
Duzib205G0506 Durio zibethinus HOM05D006376 ORTHO05D008046 1.8e-87 327.0 267 62.9
Dinv13549 Davidia involucrata HOM05D006376 ORTHO05D008046 3.0e-87 326.2 250 66.8
FvH4_5g16950 Fragaria vesca HOM05D006376 ORTHO05D008046 1.5e-86 323.9 243 68.7
FAN18G1549 Fragaria x ananassa HOM05D006376 ORTHO05D008046 1.5e-86 323.9 243 68.7
CiPaw.15G139000 Carya illinoinensis HOM05D006376 ORTHO05D008046 2.0e-86 323.6 280 62.9
Atru.chr9.942 Acer truncatum HOM05D006376 ORTHO05D008046 4.4e-86 322.4 277 62.8
COL.COLO4_37647 Corchorus olitorius HOM05D006376 ORTHO05D008046 4.4e-86 322.4 222 73.4
Gohir.D12G268200 Gossypium hirsutum HOM05D006376 ORTHO05D008046 4.4e-86 322.4 275 62.9
QL10p027316 Quercus lobata HOM05D006376 ORTHO05D008046 4.4e-86 322.4 281 63.0
FAN08G1323 Fragaria x ananassa HOM05D006376 ORTHO05D008046 5.7e-86 322.0 244 68.0
Gorai.008G288200 Gossypium raimondii HOM05D006376 ORTHO05D008046 5.7e-86 322.0 275 62.9
Thecc.03G047000 Theobroma cacao HOM05D006376 ORTHO05D008046 5.7e-86 322.0 274 64.2
Eucgr.B00851 Eucalyptus grandis HOM05D006376 ORTHO05D008046 1.3e-85 320.9 267 64.8
FAN04G0856 Fragaria x ananassa HOM05D006376 ORTHO05D008046 1.7e-85 320.5 242 68.2
Medtr8g106690 Medicago truncatula HOM05D006376 ORTHO05D008046 1.7e-85 320.5 222 71.2
CANSAT21G0790 Cannabis sativa HOM05D006376 ORTHO05D008046 2.2e-85 320.1 268 63.4
Glyma.05G243300 Glycine max HOM05D006376 ORTHO05D008046 2.2e-85 320.1 209 74.6
Hma1.2p1_0660F.1_g197700 Hydrangea macrophylla HOM05D006376 ORTHO05D008046 8.3e-85 318.2 201 75.6
TAR629G1456 Trochodendron aralioides HOM05D006376 ORTHO05D008046 8.3e-85 318.2 264 62.9
arahy.Tifrunner.gnm1.ann1.5Y9SE5 Arachis hypogaea HOM05D006376 ORTHO05D008046 1.1e-84 317.8 245 65.7
RcHm_v2.0_Chr7g0179071 Rosa chinensis HOM05D006376 ORTHO05D008046 1.1e-84 317.8 243 67.1
TPR.G12760 Trifolium pratense HOM05D006376 ORTHO05D008046 1.1e-84 317.8 260 63.1
Sabra12G0035600 Salix brachista HOM05D006376 ORTHO05D008046 1.4e-84 317.4 284 63.4
Ciclev10009207m.g Citrus clementina HOM05D006376 ORTHO05D008046 1.8e-84 317.0 279 62.0
Potri.012G052300 Populus trichocarpa HOM05D006376 ORTHO05D008046 2.4e-84 316.6 280 63.6
arahy.Tifrunner.gnm1.ann1.CZ5T9B Arachis hypogaea HOM05D006376 ORTHO05D008046 3.1e-84 316.2 245 66.1
Psat7g004120 Pisum sativum HOM05D006376 ORTHO05D008046 3.1e-84 316.2 253 65.2
VMungo0251G1463 Vigna mungo HOM05D006376 ORTHO05D008046 4.1e-84 315.8 217 70.0
Glyma.08G051100 Glycine max HOM05D006376 ORTHO05D008046 5.4e-84 315.5 209 73.7
Nn3g18015 Nelumbo nucifera HOM05D006376 ORTHO05D008046 7.0e-84 315.1 244 66.4
Sc04g0003270 Simmondsia chinensis HOM05D006376 ORTHO05D008046 7.0e-84 315.1 176 84.7
FAN13G1861 Fragaria x ananassa HOM05D006376 ORTHO05D008046 1.6e-83 313.9 243 65.8
Phvul.002G327000 Phaseolus vulgaris HOM05D006376 ORTHO05D008046 2.7e-83 313.2 217 69.6
Cc04_g06670 Coffea canephora HOM05D006376 ORTHO05D008046 4.5e-83 312.4 263 61.2
MELO3C017340.2 Cucumis melo HOM05D006376 ORTHO05D008046 4.5e-83 312.4 207 73.9
AUR62029950 Chenopodium quinoa HOM05D006376 ORTHO05D008046 1.3e-82 310.8 249 64.3
Hund02337 Selenicereus undatus HOM05D006376 ORTHO05D008046 1.7e-82 310.5 275 61.1
Lalb_Chr09g0330601 Lupinus albus HOM05D006376 ORTHO05D008046 2.9e-82 309.7 207 71.5
CsaV3_1G004140 Cucumis sativus L. HOM05D006376 ORTHO05D008046 5.0e-82 308.9 271 62.0
Cfa019704 Carpinus fangiana HOM05D006376 ORTHO05D008046 8.5e-82 308.1 172 84.3
Lj4g0006852 Lotus japonicus HOM05D006376 ORTHO05D008046 8.5e-82 308.1 258 63.2
RhsimUnG0086600 Rhododendron simsii HOM05D006376 ORTHO05D008046 8.5e-82 308.1 269 60.6
AUR62033755 Chenopodium quinoa HOM05D006376 ORTHO05D008046 1.1e-81 307.8 250 64.8
Oeu024338.1 Olea europaea HOM05D006376 ORTHO05D008046 1.1e-81 307.8 274 60.9
Rhsim07G0069700 Rhododendron simsii HOM05D006376 ORTHO05D008046 1.5e-81 307.4 269 60.6
Lsat_1_v5_gn_8_3561 Lactuca sativa HOM05D006376 ORTHO05D008046 4.2e-81 305.8 206 70.9
Haze_18787 Corylus avellana HOM05D006376 ORTHO05D008046 9.4e-81 304.7 275 60.4
Thhalv10008687m.g Eutrema salsugineum HOM05D006376 ORTHO05D008046 9.4e-81 304.7 199 75.4
Lj9A422G67 Lonicera japonica HOM05D006376 ORTHO05D008046 1.2e-80 304.3 200 72.5
EL10Ac5g11519 Beta vulgaris HOM05D006376 ORTHO05D008046 2.7e-80 303.1 232 64.7
PGR083G0770 Punica granatum HOM05D006376 ORTHO05D008046 3.6e-80 302.8 253 62.8
Nitab4.5_0012340g0010 Nicotiana tabacum HOM05D006376 ORTHO05D008046 4.7e-80 302.4 230 66.1
TWI81G0521 Tripterygium wilfordii HOM05D006376 ORTHO05D008046 6.1e-80 302.0 265 63.0
MSTRG.4559 Avicennia marina HOM05D006376 ORTHO05D008046 4.0e-79 299.3 201 73.1
AL1G30420 Arabidopsis lyrata HOM05D006376 ORTHO05D008046 5.2e-79 298.9 216 70.8
Nitab4.5_0001194g0140 Nicotiana tabacum HOM05D006376 ORTHO05D008046 5.2e-79 298.9 230 65.7
Rhsim07G0070500 Rhododendron simsii HOM05D006376 ORTHO05D008046 6.8e-79 298.5 270 58.9
Actinidia02655 Actinidia chinensis HOM05D006376 ORTHO05D008046 8.8e-79 298.1 274 57.3
Carub.0001s1773 Capsella rubella HOM05D006376 ORTHO05D008046 2.0e-78 297.0 198 74.7
THA.LOC104813912 Tarenaya hassleriana HOM05D006376 ORTHO05D008046 1.7e-77 293.9 202 72.3
Aqoxy3G03987 Aquilegia oxysepala HOM05D006376 ORTHO05D008046 2.8e-77 293.1 262 58.0
A08p30580 Brassica napus HOM05D006376 ORTHO05D008046 2.8e-77 293.1 199 71.9
AT1G18060 Arabidopsis thaliana HOM05D006376 ORTHO05D008046 3.7e-77 292.7 199 73.4
ECA233G1742 Erigeron canadensis HOM05D006376 ORTHO05D008046 4.9e-77 292.4 215 65.6
C08p18330 Brassica napus HOM05D006376 ORTHO05D008046 6.3e-77 292.0 209 68.9
BolC8t49467H Brassica oleracea HOM05D006376 ORTHO05D008046 6.3e-77 292.0 209 68.9
DCAR_014774 Daucus carota HOM05D006376 ORTHO05D008046 6.3e-77 292.0 202 68.3
CARHR018640 Cardamine hirsuta HOM05D006376 ORTHO05D008046 8.3e-77 291.6 199 73.4
Solyc06g069030.3 Solanum lycopersicum HOM05D006376 ORTHO05D008046 1.8e-76 290.4 251 61.8
Peaxi162Scf00332g00023 Petunia axillaris HOM05D006376 ORTHO05D008046 2.4e-76 290.0 254 60.6
BraA08t34989Z Brassica rapa HOM05D000280 ORTHO05D004091 4.1e-76 289.3 174 79.9
HanXRQChr05g0144491 Helianthus annuus HOM05D006376 ORTHO05D008046 5.4e-76 288.9 204 70.1
PGSC0003DMG400028793 Solanum tuberosum HOM05D006376 ORTHO05D008046 4.5e-75 285.8 242 62.0
SGA_v2.0_scaffold171G38935 Striga asiatica HOM05D006376 ORTHO05D008046 2.3e-74 283.5 256 59.8
vmacro17793 Vaccinium macrocarpon HOM05D006376 ORTHO05D008046 8.6e-74 281.6 237 59.9
Sopen06g026320 Solanum pennellii HOM05D006376 ORTHO05D008046 1.5e-73 280.8 251 60.6
Ca_17222_v3 Cicer arietinum L. HOM05D006376 ORTHO05D008046 1.9e-73 280.4 161 79.5
Lj3g0018404 Lotus japonicus HOM05D006376 ORTHO05D008046 1.2e-72 277.7 172 77.9
CAN.G423.18 Capsicum annuum HOM05D006376 ORTHO05D008046 6.1e-72 275.4 254 59.1
MBI16_g21168_MAGBIO Magnolia biondii HOM05D006376 ORTHO05D008046 8.0e-72 275.0 266 56.0
CDE03G0312 Ceratophyllum demersum HOM05D006376 ORTHO05D008046 1.8e-71 273.9 226 60.6
PSO717G0073 Papaver somniferum HOM05D006376 ORTHO05D008046 1.8e-71 273.9 190 67.9
Aa31LG6G2990 Aethionema arabicum HOM05D006376 ORTHO05D008046 4.0e-71 272.7 199 69.3
Os01g0120500 Oryza sativa ssp. japonica HOM05D006376 ORTHO05D008046 3.4e-70 269.6 252 57.5
BcaC07g38909 Brassica carinata HOM05D006376 ORTHO05D008046 5.7e-70 268.9 158 80.4
Zm00001eb334810 Zea mays HOM05D006376 ORTHO05D008046 1.3e-69 267.7 223 62.8
Duzib084G1315 Durio zibethinus HOM05D006376 ORTHO05D008046 3.7e-69 266.2 205 62.4
PSO675G4918 Papaver somniferum HOM05D006376 ORTHO05D008046 6.4e-69 265.4 273 53.5
ATR0691G291 Amborella trichopoda HOM05D006376 ORTHO05D008046 8.3e-69 265.0 202 63.9
Sp1g16080 Schrenkiella parvula HOM05D006376 ORTHO05D008046 7.0e-68 261.9 146 83.6
ClCG06G014480 Citrullus lanatus HOM05D006376 ORTHO05D008046 7.8e-67 258.5 271 55.4
HPP92_000150 Vanilla planifolia HOM05D006376 ORTHO05D008046 6.6e-66 255.4 174 70.7
Gohir.A12G267700 Gossypium hirsutum HOM05D006376 ORTHO05D008046 5.8e-62 242.3 275 52.0
SEGI_27865 Sequoiadendron giganteum HOM05D006376 ORTHO05D008046 1.9e-60 237.3 235 53.2
Migut.D01443 Erythranthe guttata HOM05D006376 ORTHO05D008046 3.5e-59 233.0 176 67.0
Pp3c8_21790 Physcomitrium patens HOM05D006376 ORTHO05D008046 8.1e-56 221.9 209 54.5
MD06G1223100 Malus domestica HOM05D006376 ORTHO05D008046 8.9e-55 218.4 119 82.4
unitig_21.g20431 Utricularia gibba HOM05D006376 ORTHO05D008046 2.0e-54 217.2 193 57.5
AagrBONN_evm.TU.Sc2ySwM_340.32 Anthoceros agrestis HOM05D006376 ORTHO05D008046 7.5e-54 215.3 222 50.0
SMO116G0316 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 1.8e-47 194.1 191 50.3
Mapoly0001s0324 Marchantia polymorpha HOM05D006376 ORTHO05D008046 2.0e-46 190.7 261 41.0
SMO164G0083 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 4.1e-44 183.0 178 51.1
SEGI_30520 Sequoiadendron giganteum HOM05D006376 ORTHO05D008046 1.6e-35 154.5 96 71.9
MD14G1232300 Malus domestica HOM05D006376 ORTHO05D008046 2.7e-35 153.7 170 53.5
Thecc.03G047400 Theobroma cacao HOM05D006376 ORTHO05D008046 3.1e-31 140.2 165 51.5
Rhsim07G0070600 Rhododendron simsii HOM05D006376 ORTHO05D008046 5.1e-26 122.9 166 48.2
Hma1.2p1_0660F.1_g197690 Hydrangea macrophylla HOM05D006376 ORTHO05D008046 2.5e-25 120.6 156 48.7
PRCOL_00002665 Prasinoderma coloniale HOM05D006376 ORTHO05D008046 6.4e-21 105.9 169 35.5
Cre09.g401350 Chlamydomonas reinhardtii HOM05D006376 ORTHO05D008046 9.3e-20 102.1 191 34.0
arahy.Tifrunner.gnm1.ann1.VLX8JM Arachis hypogaea HOM05D006376 ORTHO05D008046 1.1e-17 95.1 103 52.4
arahy.Tifrunner.gnm1.ann1.W819WZ Arachis hypogaea HOM05D006376 ORTHO05D008046 2.8e-16 90.5 86 58.1
arahy.Tifrunner.gnm1.ann1.Y3IZ58 Arachis hypogaea HOM05D006376 ORTHO05D008046 2.8e-16 90.5 139 43.9
SEGI_17791 Sequoiadendron giganteum HOM05D006376 ORTHO05D008046 2.8e-16 90.5 62 62.9
arahy.Tifrunner.gnm1.ann1.8TB400 Arachis hypogaea HOM05D006376 ORTHO05D008046 3.7e-16 90.1 139 44.6
arahy.Tifrunner.gnm1.ann1.FQ3MGU Arachis hypogaea HOM05D006376 ORTHO05D008046 4.0e-15 86.7 139 43.2
Dinv17636 Davidia involucrata HOM05D012663 ORTHO05D004533 5.1e-10 69.7 47 72.3
arahy.Tifrunner.gnm1.ann1.XS5A0Y Arachis hypogaea HOM05D006376 ORTHO05D008046 3.3e-09 67.0 73 54.8
arahy.Tifrunner.gnm1.ann1.QNQ2AZ Arachis hypogaea HOM05D006376 ORTHO05D008046 8.2e-08 62.4 65 53.8
SMO137G0132 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 1.1e-07 62.0 80 47.5
arahy.Tifrunner.gnm1.ann1.PN4BM4 Arachis hypogaea HOM05D001163 ORTHO05D001769 2.4e-07 60.8 109 40.4
Cpa.g.sc127.24 Carica papaya HOM05D000055 ORTHO05D000057 2.0e-06 57.8 51 60.8
SMO170G0025 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 2.0e-06 57.8 74 47.3


User provided reference genes

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