Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 8.9e-193 676.8 346 100.0
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 2.1e-133 479.6 338 71.6
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 8.8e-132 474.2 338 71.0
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 2.5e-131 472.6 337 70.3
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 5.7e-131 471.5 337 69.7
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 2.8e-130 469.2 337 69.4
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 3.7e-130 468.8 338 70.1
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 3.7e-130 468.8 338 71.0
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 1.1e-129 467.2 338 70.7
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 1.4e-129 466.8 337 71.5
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 7.7e-128 461.1 338 71.0
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 5.0e-127 458.4 338 68.9
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 8.5e-127 457.6 335 67.5
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 3.2e-126 455.7 338 69.5
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 4.2e-126 455.3 338 68.6
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 5.5e-126 454.9 338 68.0
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 7.2e-126 454.5 338 68.0
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 2.7e-125 452.6 335 67.8
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 4.7e-125 451.8 338 67.5
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 6.1e-125 451.4 340 67.9
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 7.9e-125 451.1 338 68.6
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 1.0e-124 450.7 338 68.0
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 1.4e-124 450.3 338 66.9
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 1.8e-124 449.9 338 68.9
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 8.8e-124 447.6 338 67.8
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 1.1e-123 447.2 335 68.7
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 1.7e-122 443.4 338 66.6
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 2.2e-122 443.0 338 67.5
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 8.2e-122 441.0 338 66.0
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 1.1e-121 440.7 338 66.0
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 1.1e-121 440.7 335 68.1
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 1.1e-121 440.7 335 67.5
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 1.4e-121 440.3 353 64.3
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 2.4e-121 439.5 341 67.2
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 5.9e-120 434.9 337 64.7
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 5.9e-120 434.9 338 66.3
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 2.2e-119 433.0 337 65.9
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 1.1e-118 430.6 337 64.7
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 1.1e-118 430.6 338 63.6
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 1.1e-118 430.6 337 64.7
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 2.5e-118 429.5 338 66.0
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 3.2e-118 429.1 337 63.5
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 3.2e-118 429.1 337 63.5
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 4.2e-118 428.7 326 66.3
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 4.2e-118 428.7 326 66.3
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 5.5e-118 428.3 337 63.8
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 1.2e-117 427.2 334 66.2
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 1.6e-117 426.8 337 63.8
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.6e-117 426.8 326 66.0
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 2.7e-117 426.0 337 63.5
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 3.6e-117 425.6 337 63.5
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 4.7e-117 425.2 338 64.5
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 1.0e-116 424.1 339 63.7
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 4.4e-115 418.7 338 64.8
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 5.7e-115 418.3 324 65.4
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 1.4e-113 413.7 335 62.4
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 4.1e-113 412.1 341 61.0
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 5.3e-113 411.8 324 66.0
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 1.2e-112 410.6 338 64.5
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 3.5e-112 409.1 338 63.3
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 1.0e-111 407.5 336 60.4
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 1.3e-111 407.1 329 63.8
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 1.3e-111 407.1 338 62.1
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 6.5e-111 404.8 336 60.4
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 1.5e-110 403.7 338 62.4
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 1.5e-110 403.7 323 63.2
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 3.2e-110 402.5 338 61.8
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 1.2e-109 400.6 333 63.4
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 4.7e-109 398.7 340 62.1
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 1.0e-108 397.5 334 61.4
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 2.0e-107 393.3 338 60.4
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 3.7e-106 389.0 324 61.4
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 1.1e-105 387.5 290 68.3
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 3.1e-105 386.0 338 60.1
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 3.5e-104 382.5 338 58.9
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 3.5e-104 382.5 318 64.2
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 4.5e-104 382.1 326 61.7
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 5.9e-104 381.7 323 61.3
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 2.9e-103 379.4 337 59.1
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 3.0e-100 369.4 359 56.5
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 2.0e-99 366.7 296 65.2
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 2.0e-99 366.7 296 65.2
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 1.7e-98 363.6 343 58.9
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 1.2e-93 347.4 337 56.1
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 2.1e-93 346.7 309 59.2
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 4.0e-92 342.4 258 65.9
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 1.2e-91 340.9 243 69.5
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 4.5e-88 328.9 277 62.5
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 7.3e-86 321.6 335 53.4
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 5.4e-81 305.4 293 56.7
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 2.5e-78 296.6 222 66.2
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 1.1e-76 291.2 333 44.7
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 6.8e-76 288.5 341 44.6
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 8.9e-76 288.1 202 68.8
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 1.5e-75 287.3 190 76.8
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 1.5e-75 287.3 225 64.0
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 6.4e-74 282.0 243 59.3
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 1.1e-68 264.6 334 42.5
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 2.3e-68 263.5 333 42.0
Haze_18872 Corylus avellana HOM05D006919 ORTHO05D008705 8.9e-68 261.5 321 48.0
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 2.7e-64 250.0 336 43.5
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 3.4e-59 233.0 327 38.5
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 9.0e-52 208.4 290 42.4
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 8.7e-47 191.8 157 61.8
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 8.7e-47 191.8 363 35.0
RcHm_v2.0_Chr5g0035741 Rosa chinensis HOM05D006919 ORTHO05D008705 1.8e-44 184.1 155 58.7
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 1.5e-43 181.0 236 43.2
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 1.9e-41 174.1 159 55.3
Lj9A419G30 Lonicera japonica HOM05D006919 ORTHO05D008705 8.4e-34 148.7 256 37.5
arahy.Tifrunner.gnm1.ann1.248BIT Arachis hypogaea HOM05D006919 ORTHO05D008705 3.9e-31 139.8 112 64.3
SEGI_02358 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 2.7e-24 117.1 93 58.1
CBR_g74660 Chara braunii HOM05D006919 ORTHO05D008705 1.1e-17 95.1 195 33.8
Lj9C419T19 Lonicera japonica HOM05D006919 ORTHO05D008705 4.6e-16 89.7 53 81.1
RcHm_v2.0_Chr7g0212051 Rosa chinensis HOM05D006919 ORTHO05D008705 1.5e-14 84.7 99 48.5
ECA233G3510 Erigeron canadensis HOM05D015936 ORTHO05D022524 3.9e-07 60.1 44 63.6
CSS0046000 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D004872 1.5e-06 58.2 37 70.3


User provided reference genes

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