Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc3.386 Carica papaya HOM05D000002 ORTHO05D000047 2.8e-44 181.4 82 100.0
Hma1.2p1_1349F.1_g277350 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.0e-26 122.1 74 79.7
Hma1.2p1_0036F.1_g023540 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.9e-25 117.5 74 77.0
Hma1.2p1_0349F.1_g132140 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.9e-23 110.2 75 66.7
Hma1.2p1_2309F.1_g319500 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.9e-23 110.2 75 66.7
Hma1.2p1_1551F.1_g290170 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.7e-22 107.1 75 65.3
Hma1.2p1_0450F.1_g155525 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.9e-21 105.5 74 70.3
Hma1.2p1_0450F.1_g155530 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.9e-21 105.5 74 70.3
Hma1.2p1_0450F.1_g155540 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.9e-21 105.5 74 70.3
Hma1.2p1_0450F.1_g155545 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.9e-21 105.5 74 70.3
Hma1.2p1_0503F.1_g168050 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.9e-21 105.5 74 68.9
Hma1.2p1_0164F.1_g073240 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.6e-21 104.0 75 62.7
Hma1.2p1_0077F.1_g039800 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.1e-19 98.2 59 78.0
Hma1.2p1_1513F.1_g288010 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.0e-18 95.5 74 60.8
Hma1.2p1_0247F.1_g101820 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.6e-18 95.1 63 68.3
Hma1.2p1_0744F.1_g211780 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.3e-17 92.8 61 63.9
Hma1.2p1_0706F.1_g207010 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.7e-17 92.4 74 59.5
Hma1.2p1_1113F.1_g258670 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.9e-17 91.7 61 63.9
TWI23G0973 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 8.4e-17 90.1 71 57.7
Hma1.2p1_0217F.1_g091730 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.9e-16 89.0 61 60.7
Hma1.2p1_0628F.1_g191990 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.2e-16 88.2 61 60.7
Hma1.2p1_0722F.1_g208760 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.3e-16 86.7 60 60.0
Atru.chr3.1979 Acer truncatum HOM05D000002 ORTHO05D000047 1.2e-15 86.3 78 50.0
Hma1.2p1_3882F.1_g337890 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.2e-15 86.3 62 61.3
Hma1.2p1_0270F.1_g108600 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.1e-15 85.5 68 55.9
Hma1.2p1_0232F.1_g097650 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.0e-14 83.2 61 57.4
Hma1.2p1_0062F.1_g034270 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.3e-14 82.8 61 57.4
Hma1.2p1_0074F.1_g038980 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.8e-14 82.4 61 57.4
Hma1.2p1_0072F.1_g038350 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.0e-14 81.6 61 55.7
Hma1.2p1_0004F.1_g004100 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.9e-14 81.3 61 55.7
Hma1.2p1_0359F.1_g135490 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.1e-14 80.9 61 54.1
CSS0000858 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.7e-14 80.5 76 55.3
CSS0007796 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.7e-14 80.5 76 55.3
CSS0010335 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.7e-14 80.5 76 55.3
CSS0029482 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.7e-14 80.5 76 55.3
CSS0037461 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.7e-14 80.5 76 55.3
CSS0038170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.7e-14 80.5 76 55.3
CSS0033236 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.7e-14 80.1 76 55.3
Hma1.2p1_0018F.1_g013420 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.7e-14 80.1 57 61.4
Nn2g11309 Nelumbo nucifera HOM05D000002 ORTHO05D000047 1.5e-13 79.3 80 47.5
Nn5g30897 Nelumbo nucifera HOM05D000002 ORTHO05D000047 2.5e-13 78.6 75 49.3
CSS0004866 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.3e-13 78.2 76 55.3
CSS0010794 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.3e-13 78.2 76 55.3
CSS0011005 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.3e-13 78.2 76 55.3
CSS0017883 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.3e-13 78.2 76 55.3
CSS0027817 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.3e-13 78.2 76 55.3
CSS0032452 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.3e-13 78.2 76 55.3
CSS0038278 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.3e-13 78.2 76 55.3
CSS0041031 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.3e-13 78.2 76 55.3
CSS0048989 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.3e-13 78.2 76 55.3
CSS0050398 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.3e-13 78.2 76 55.3
Hma1.2p1_0868F.1_g230500 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.3e-13 78.2 61 55.7
Hma1.2p1_1043F.1_g251210 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.3e-13 78.2 50 70.0
GSVIVG01038208001 Vitis vinifera HOM05D000002 ORTHO05D000047 3.3e-13 78.2 80 48.8
CSS0001250 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.3e-13 77.8 76 55.3
CSS0024170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.3e-13 77.8 76 55.3
CSS0039193 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.3e-13 77.8 76 55.3
CSS0004984 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.7e-13 77.4 37 83.8
CSS0022055 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.7e-13 77.4 76 53.9
Nn7g38028 Nelumbo nucifera HOM05D000002 ORTHO05D000047 9.6e-13 76.6 75 49.3
Oeu052091.1 Olea europaea HOM05D000002 ORTHO05D000001 9.6e-13 76.6 63 58.7
CSS0017511 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.3e-12 76.3 76 53.9
Hma1.2p1_1694F.1_g298020 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.1e-12 75.5 59 54.2
Hma1.2p1_1549F.1_g290080 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.8e-12 75.1 47 59.6
CSS0000519 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.7e-12 74.7 74 51.4
CSS0001169 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.7e-12 74.7 63 58.7
Hma1.2p1_0210F.1_g089480 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-11 73.2 59 47.5
Hma1.2p1_0812F.1_g222220 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-11 73.2 59 47.5
CSS0029966 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.0e-11 71.2 37 70.3
Hma1.2p1_0183F.1_g081030 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.3e-11 70.9 61 52.5
Cpa.g.sc15.70 Carica papaya HOM05D000002 ORTHO05D000047 6.9e-11 70.5 48 56.2
SHI23105 Sapria himalayana HOM05D000002 ORTHO05D000047 6.9e-11 70.5 74 50.0
Hma1.2p1_0526F.1_g172830 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.0e-11 70.1 57 57.9
CANSAT25G0968 Cannabis sativa HOM05D000002 ORTHO05D000047 1.2e-10 69.7 64 50.0
SHI48864 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-10 69.7 74 48.6
Cpa.g.sc12.143 Carica papaya HOM05D000002 ORTHO05D000047 1.5e-10 69.3 48 56.2
Hma1.2p1_0172F.1_g076320 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.6e-10 68.6 55 56.4
Nn5g30282 Nelumbo nucifera HOM05D000002 ORTHO05D000047 2.6e-10 68.6 32 68.8
CSS0008463 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.4e-10 68.2 63 55.6
Cpa.g.sc25.53 Carica papaya HOM05D000002 ORTHO05D000047 3.4e-10 68.2 35 71.4
Cpa.g.sc29.59 Carica papaya HOM05D000002 ORTHO05D000047 4.5e-10 67.8 35 68.6
Cpa.g.sc59.53 Carica papaya HOM05D000002 ORTHO05D000047 4.5e-10 67.8 61 50.8
Cpa.g.sc176.9 Carica papaya HOM05D000002 ORTHO05D000047 5.8e-10 67.4 34 70.6
Hma1.2p1_0530F.1_g173310 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.6e-10 67.0 57 52.6
Nn1g04145 Nelumbo nucifera HOM05D000002 ORTHO05D000047 7.6e-10 67.0 75 42.7
Oeu026778.1 Olea europaea HOM05D000002 ORTHO05D000001 7.6e-10 67.0 66 43.9
Cpa.g.sc133.6 Carica papaya HOM05D000002 ORTHO05D000047 1.0e-09 66.6 35 68.6
Cpa.g.sc15.92 Carica papaya HOM05D001549 ORTHO05D003098 1.3e-09 66.2 45 53.3
Cpa.g.sc176.5 Carica papaya HOM05D000002 ORTHO05D000047 2.2e-09 65.5 53 43.4
Cpa.g.sc30.23 Carica papaya HOM05D000002 ORTHO05D000047 2.2e-09 65.5 53 45.3
SHI26944 Sapria himalayana HOM05D000002 ORTHO05D000047 3.8e-09 64.7 57 49.1
Hma1.2p1_0378F.1_g139783 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.0e-09 64.3 81 44.4
Hma1.2p1_0668F.1_g199811 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.0e-09 64.3 81 44.4
Hma1.2p1_0668F.1_g199820 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.0e-09 64.3 81 44.4
SHI14617 Sapria himalayana HOM05D000002 ORTHO05D000047 5.0e-09 64.3 46 56.5
SHI20908 Sapria himalayana HOM05D000023 ORTHO05D000014 8.4e-09 63.5 53 50.9
Atru.chr3.1554 Acer truncatum HOM05D000002 ORTHO05D000047 1.1e-08 63.2 51 52.9
Cpa.g.sc122.32 Carica papaya HOM05D000002 ORTHO05D000047 1.1e-08 63.2 41 58.5
Cpa.g.sc5.346 Carica papaya HOM05D000002 ORTHO05D000047 1.1e-08 63.2 35 65.7
Hma1.2p1_2334F.1_g320160 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-08 63.2 63 49.2
Cpa.g.sc11.149 Carica papaya HOM05D000002 ORTHO05D000047 1.4e-08 62.8 49 49.0
Cpa.g.sc24.57 Carica papaya HOM05D000002 ORTHO05D000047 1.4e-08 62.8 35 62.9
Cpa.g.sc118.22 Carica papaya HOM05D000002 ORTHO05D000047 1.9e-08 62.4 68 47.1
Cpa.g.sc58.26 Carica papaya HOM05D000002 ORTHO05D000047 1.9e-08 62.4 48 50.0
Ca_11532_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 1.9e-08 62.4 61 49.2
Hma1.2p1_0069F.1_g037490 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.9e-08 62.4 70 47.1
Cpa.g.sc28.123 Carica papaya HOM05D000207 ORTHO05D000047 2.5e-08 62.0 45 53.3
Hma1.2p1_1207F.1_g267040 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.5e-08 62.0 79 41.8
Hma1.2p1_0062F.1_g034230 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.2e-08 61.6 87 40.2
Cpa.g.sc22.53 Carica papaya HOM05D000002 ORTHO05D000047 5.5e-08 60.8 46 52.2
Hma1.2p1_0316F.1_g123090 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.5e-08 60.8 77 41.6
CANSAT54G2576 Cannabis sativa HOM05D000002 ORTHO05D000047 7.1e-08 60.5 63 41.3
Cpa.g.sc163.26 Carica papaya HOM05D006718 ORTHO05D008492 9.3e-08 60.1 45 51.1
Cpa.g.sc41.68 Carica papaya HOM05D000002 ORTHO05D000047 1.2e-07 59.7 53 39.6
Hma1.2p1_0172F.1_g076300 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.2e-07 59.7 79 40.5
Hma1.2p1_0589F.1_g184740 Hydrangea macrophylla HOM05D004493 ORTHO05D005117 1.2e-07 59.7 75 44.0
CANSAT80G2584 Cannabis sativa HOM05D000002 ORTHO05D000047 1.6e-07 59.3 60 41.7
Hma1.2p1_0528F.1_g173080 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.6e-07 59.3 48 58.3
Oeu044270.1 Olea europaea HOM05D000002 ORTHO05D000047 2.1e-07 58.9 51 47.1
CSS0050489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.7e-07 58.5 31 67.7
Hma1.2p1_0734F.1_g210330 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.7e-07 58.5 81 42.0
CSS0000940 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.6e-07 57.8 63 42.9
CSS0004057 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.6e-07 57.8 63 42.9
CSS0009499 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.6e-07 57.8 63 42.9
CSS0012133 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.6e-07 57.8 63 42.9
CSS0013318 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.6e-07 57.8 63 42.9
CSS0020187 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.6e-07 57.8 63 42.9
CSS0021109 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.6e-07 57.8 63 42.9
CSS0027844 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.6e-07 57.8 63 42.9
CSS0034457 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.6e-07 57.8 63 42.9
CSS0036528 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.6e-07 57.8 63 42.9
CSS0043797 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.6e-07 57.8 63 42.9
CSS0045746 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.6e-07 57.8 63 42.9
Cpa.g.sc20.131 Carica papaya HOM05D004423 ORTHO05D000047 4.6e-07 57.8 35 62.9
Ca_02873_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 4.6e-07 57.8 61 41.0
Cpa.g.sc21.143 Carica papaya HOM05D000002 ORTHO05D000047 1.0e-06 56.6 39 56.4
CSS0019500 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.3e-06 56.2 63 41.3
VMungo1383G2495 Vigna mungo HOM05D002560 ORTHO05D003782 2.3e-06 55.5 59 45.8
CSS0017533 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.0e-06 55.1 63 41.3
CiPaw.01G278500 Carya illinoinensis HOM05D000002 ORTHO05D000001 3.0e-06 55.1 31 64.5
MELO3C028461.2 Cucumis melo HOM05D011127 ORTHO05D000047 3.0e-06 55.1 58 43.1
Sopen04g035530 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.1 59 40.7
Sopen06g018590 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.1 59 40.7
Sopen06g021680 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 55.1 59 40.7
Hma1.2p1_0172F.1_g076310 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.9e-06 54.7 43 58.1
Lj1g0008265 Lotus japonicus HOM05D000002 ORTHO05D000047 3.9e-06 54.7 59 44.1
Lj3g0020805 Lotus japonicus HOM05D000002 ORTHO05D000047 3.9e-06 54.7 59 44.1
Hma1.2p1_1179F.1_g264460 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.1e-06 54.3 70 40.0
SHI07599 Sapria himalayana HOM05D000002 ORTHO05D000047 5.1e-06 54.3 54 44.4
Cpa.g.sc71.36 Carica papaya HOM05D000002 ORTHO05D000047 8.7e-06 53.5 45 46.7
AUR62013689 Chenopodium quinoa HOM05D000002 ORTHO05D000047 8.7e-06 53.5 64 35.9
Sopen04g014630 Solanum pennellii HOM05D000002 ORTHO05D000001 8.7e-06 53.5 57 38.6
Sopen07g007590 Solanum pennellii HOM05D000002 ORTHO05D000001 8.7e-06 53.5 56 44.6


User provided reference genes

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