Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc3.366 Carica papaya HOM05D008500 ORTHO05D005299 8.7e-41 169.9 85 100.0
Thecc.03G061000 Theobroma cacao HOM05D008500 ORTHO05D005299 3.3e-16 88.2 85 61.2
Phvul.004G148400 Phaseolus vulgaris HOM05D008500 ORTHO05D005299 3.1e-14 81.6 62 66.1
Glyma.09G173300 Glycine max HOM05D008500 ORTHO05D005299 4.1e-14 81.3 62 69.4
VMungo0464G1302 Vigna mungo HOM05D008500 ORTHO05D005299 5.3e-14 80.9 63 66.7
Glyma.07G104300 Glycine max HOM05D008500 ORTHO05D005299 2.6e-13 78.6 64 64.1
Lalb_Chr14g0370691 Lupinus albus HOM05D008500 ORTHO05D005299 1.7e-12 75.9 59 69.5
Lalb_Chr16g0386911 Lupinus albus HOM05D008500 ORTHO05D005299 2.2e-12 75.5 62 62.9
arahy.Tifrunner.gnm1.ann1.B8M078 Arachis hypogaea HOM05D008500 ORTHO05D005299 2.5e-11 72.0 66 62.1
arahy.Tifrunner.gnm1.ann1.J4XL7B Arachis hypogaea HOM05D008500 ORTHO05D005299 3.2e-11 71.6 66 60.6
TPR.G18382 Trifolium pratense HOM05D008500 ORTHO05D005299 3.2e-11 71.6 74 55.4
Duzib205G0189 Durio zibethinus HOM05D008500 ORTHO05D005299 4.2e-11 71.2 72 59.7
FAN08G2086 Fragaria x ananassa HOM05D008500 ORTHO05D005299 4.2e-11 71.2 80 55.0
Medtr6g071040 Medicago truncatula HOM05D008500 ORTHO05D005299 4.2e-11 71.2 59 62.7
FAN04G2293 Fragaria x ananassa HOM05D008500 ORTHO05D005299 5.5e-11 70.9 63 60.3
Lalb_Chr05g0221531 Lupinus albus HOM05D008500 ORTHO05D005299 5.5e-11 70.9 75 54.7
Manes.14G157100 Manihot esculenta HOM05D008500 ORTHO05D005299 7.2e-11 70.5 72 58.3
FvH4_5g17640 Fragaria vesca HOM05D008500 ORTHO05D005299 9.4e-11 70.1 81 51.9
FAN18G0107 Fragaria x ananassa HOM05D008500 ORTHO05D005299 9.4e-11 70.1 81 51.9
QL10p031374 Quercus lobata HOM05D008500 ORTHO05D005299 1.6e-10 69.3 75 57.3
Haze_18904 Corylus avellana HOM05D008500 ORTHO05D005299 2.1e-10 68.9 76 56.6
Haze_18910 Corylus avellana HOM05D008500 ORTHO05D005299 2.1e-10 68.9 76 56.6
FAN13G1653 Fragaria x ananassa HOM05D008500 ORTHO05D005299 3.6e-10 68.2 80 53.8
RcHm_v2.0_Chr7g0178031 Rosa chinensis HOM05D008500 ORTHO05D005299 3.6e-10 68.2 81 51.9
Sed0027993 Sechium edule HOM05D008500 ORTHO05D005299 3.6e-10 68.2 58 67.2
CiPaw.15G146300 Carya illinoinensis HOM05D008500 ORTHO05D005299 4.6e-10 67.8 75 56.0
Psat1g030680 Pisum sativum HOM05D008500 ORTHO05D005299 4.6e-10 67.8 61 59.0
PGR044G0774 Punica granatum HOM05D008500 ORTHO05D005299 7.9e-10 67.0 79 57.0
Duzib268G0019 Durio zibethinus HOM05D007313 ORTHO05D005299 1.8e-09 65.9 57 64.9
Gohir.D02G140300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 1.8e-09 65.9 57 66.7
Gorai.005G156500 Gossypium raimondii HOM05D007313 ORTHO05D005299 1.8e-09 65.9 57 66.7
THA.LOC104825566 Tarenaya hassleriana HOM05D007313 ORTHO05D005299 1.8e-09 65.9 58 60.3
Thecc.02G291900 Theobroma cacao HOM05D007313 ORTHO05D005299 1.8e-09 65.9 84 52.4
Gohir.A03G114900 Gossypium hirsutum HOM05D007313 ORTHO05D005299 2.3e-09 65.5 82 54.9
Duzib248G0390 Durio zibethinus HOM05D007313 ORTHO05D005299 3.0e-09 65.1 74 56.8
Gohir.A01G147300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 3.0e-09 65.1 74 55.4
Gohir.D01G140300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 3.0e-09 65.1 74 55.4
Gorai.002G172500 Gossypium raimondii HOM05D007313 ORTHO05D005299 3.0e-09 65.1 74 55.4
Sabra15G0028800 Salix brachista HOM05D008500 ORTHO05D005299 3.0e-09 65.1 77 50.6
Eucgr.K02282 Eucalyptus grandis HOM05D008500 ORTHO05D005299 5.1e-09 64.3 89 47.2
Gohir.D12G270900 Gossypium hirsutum HOM05D008500 ORTHO05D005299 5.1e-09 64.3 79 55.7
Potri.012G044001 Populus trichocarpa HOM05D008500 ORTHO05D005299 8.8e-09 63.5 77 50.6
MELO3C002147.2 Cucumis melo HOM05D008500 ORTHO05D005299 1.1e-08 63.2 57 64.9
Dinv10480 Davidia involucrata HOM05D007313 ORTHO05D005299 1.1e-08 63.2 57 64.9
ClCG04G010470 Citrullus lanatus HOM05D008500 ORTHO05D005299 1.5e-08 62.8 57 64.9
Gorai.008G291300 Gossypium raimondii HOM05D008500 ORTHO05D005299 1.9e-08 62.4 79 54.4
Sabra12G0030900 Salix brachista HOM05D008500 ORTHO05D005299 1.9e-08 62.4 63 54.0
TAR629G3106 Trochodendron aralioides HOM05D007313 ORTHO05D005299 1.9e-08 62.4 83 44.6
Gohir.A12G270500 Gossypium hirsutum HOM05D008500 ORTHO05D005299 3.3e-08 61.6 78 53.8
MBI19_g22070_MAGBIO Magnolia biondii HOM05D008500 ORTHO05D005299 4.3e-08 61.2 74 52.7
Rhsim09G0090300 Rhododendron simsii HOM05D007313 ORTHO05D005299 4.3e-08 61.2 61 59.0
Potri.015G034800 Populus trichocarpa HOM05D008500 ORTHO05D005299 5.7e-08 60.8 70 50.0
Aa31LG7G9440 Aethionema arabicum HOM05D007313 ORTHO05D005299 1.3e-07 59.7 53 64.2
Cfa020630 Carpinus fangiana HOM05D008500 ORTHO05D005299 1.3e-07 59.7 57 61.4
Manes.06G003500 Manihot esculenta HOM05D008500 ORTHO05D005299 1.3e-07 59.7 69 52.2
COL.COLO4_16580 Corchorus olitorius HOM05D007313 ORTHO05D005299 1.7e-07 59.3 77 53.2
DCAR_026801 Daucus carota HOM05D007313 ORTHO05D005299 1.7e-07 59.3 62 59.7
Prupe.5G236200 Prunus persica HOM05D008500 ORTHO05D005299 1.7e-07 59.3 71 54.9
TAR371G1237 Trochodendron aralioides HOM05D008500 ORTHO05D005299 1.7e-07 59.3 76 50.0
AT1G67920 Arabidopsis thaliana HOM05D007313 ORTHO05D005299 2.2e-07 58.9 58 58.6
BcaC08g46017 Brassica carinata HOM05D007313 ORTHO05D005299 2.8e-07 58.5 52 67.3
A07p32280 Brassica napus HOM05D007313 ORTHO05D005299 2.8e-07 58.5 52 67.3
C06p38120 Brassica napus HOM05D007313 ORTHO05D005299 2.8e-07 58.5 52 67.3
BolC6t38909H Brassica oleracea HOM05D007313 ORTHO05D005299 2.8e-07 58.5 52 67.3
BraA07t30853Z Brassica rapa HOM05D007313 ORTHO05D005299 2.8e-07 58.5 52 67.3
CsaV3_1G007310 Cucumis sativus L. HOM05D008500 ORTHO05D005299 2.8e-07 58.5 54 59.3
Migut.E00472 Erythranthe guttata HOM05D007313 ORTHO05D005299 3.7e-07 58.2 71 50.7
TAR371G0465 Trochodendron aralioides HOM05D008500 ORTHO05D005299 3.7e-07 58.2 76 50.0
AL2G26720 Arabidopsis lyrata HOM05D007313 ORTHO05D005299 4.8e-07 57.8 58 56.9
SalBow2G1257 Salvia bowleyana HOM05D007313 ORTHO05D005299 4.8e-07 57.8 58 58.6
BcaB03g15385 Brassica carinata HOM05D007313 ORTHO05D005299 8.2e-07 57.0 52 63.5
CSS0007506 Camellia sinensis var. sinensis HOM05D007313 ORTHO05D005299 8.2e-07 57.0 63 57.1
CSS0045507 Camellia sinensis var. sinensis HOM05D007313 ORTHO05D005299 8.2e-07 57.0 63 58.7
CARHR060560 Cardamine hirsuta HOM05D007313 ORTHO05D005299 1.1e-06 56.6 82 48.8
Nn4g24351 Nelumbo nucifera HOM05D008500 ORTHO05D005299 1.1e-06 56.6 59 59.3
Atru.chr11.945 Acer truncatum HOM05D007313 ORTHO05D005299 1.4e-06 56.2 65 52.3
A02p14560 Brassica napus HOM05D007313 ORTHO05D005299 1.8e-06 55.8 52 65.4
BraA02t06526Z Brassica rapa HOM05D007313 ORTHO05D005299 1.8e-06 55.8 52 65.4
Carub.0002s1441 Capsella rubella HOM05D007313 ORTHO05D005299 1.8e-06 55.8 57 57.9
Thhalv10019740m.g Eutrema salsugineum HOM05D007313 ORTHO05D005299 2.4e-06 55.5 52 63.5
Sp5g22920 Schrenkiella parvula HOM05D007313 ORTHO05D005299 3.1e-06 55.1 52 63.5
Lalb_Chr24g0398121 Lupinus albus HOM05D008500 ORTHO05D005299 4.1e-06 54.7 52 59.6
ECA233G5799 Erigeron canadensis HOM05D007313 ORTHO05D005299 5.3e-06 54.3 77 46.8
Eucgr.H00551 Eucalyptus grandis HOM05D008500 ORTHO05D005299 5.3e-06 54.3 56 53.6
Nn3g18353 Nelumbo nucifera HOM05D008500 ORTHO05D005299 6.9e-06 53.9 54 61.1


User provided reference genes

Program Settings