Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc3.348 Carica papaya HOM05D006155 ORTHO05D007529 0.0e+00 1080.1 528 100.0
COL.COLO4_15996 Corchorus olitorius HOM05D006155 ORTHO05D007529 2.2e-81 307.4 162 84.6
Aa31LG5G4150 Aethionema arabicum HOM05D006155 ORTHO05D007529 3.7e-81 306.6 194 73.7
Ciclev10005577m.g Citrus clementina HOM05D006155 ORTHO05D007529 8.2e-81 305.4 211 70.1
Atru.chr4.1882 Acer truncatum HOM05D006155 ORTHO05D007529 1.1e-80 305.1 186 77.4
AT2G33255 Arabidopsis thaliana HOM05D006155 ORTHO05D007529 3.1e-80 303.5 195 72.8
Gorai.011G180400 Gossypium raimondii HOM05D006155 ORTHO05D007529 3.1e-80 303.5 182 78.6
Haze_11491 Corylus avellana HOM05D006155 ORTHO05D007529 4.1e-80 303.1 195 75.4
Duzib151G0563 Durio zibethinus HOM05D006155 ORTHO05D007529 4.1e-80 303.1 194 75.3
Gohir.D10G160700 Gossypium hirsutum HOM05D006155 ORTHO05D007529 7.0e-80 302.4 182 78.0
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 9.1e-80 302.0 186 74.2
THA.LOC104816010 Tarenaya hassleriana HOM05D006155 ORTHO05D007529 1.2e-79 301.6 182 78.0
Oeu055271.1 Olea europaea HOM05D006155 ORTHO05D007529 1.5e-79 301.2 194 74.2
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 2.0e-79 300.8 186 73.7
Thecc.04G268500 Theobroma cacao HOM05D006155 ORTHO05D007529 2.0e-79 300.8 182 78.0
Thhalv10017161m.g Eutrema salsugineum HOM05D006155 ORTHO05D007529 2.6e-79 300.4 195 71.8
TWI09G0038 Tripterygium wilfordii HOM05D006155 ORTHO05D007529 2.6e-79 300.4 188 77.1
Gohir.A10G106500 Gossypium hirsutum HOM05D006155 ORTHO05D007529 5.9e-79 299.3 182 77.5
CARHR127260 Cardamine hirsuta HOM05D006155 ORTHO05D007529 7.7e-79 298.9 195 72.3
Prupe.1G052300 Prunus persica HOM05D006155 ORTHO05D007529 7.7e-79 298.9 198 72.7
arahy.Tifrunner.gnm1.ann1.NLE1X5 Arachis hypogaea HOM05D006155 ORTHO05D007529 1.7e-78 297.7 210 70.0
MD16G1230400 Malus domestica HOM05D006155 ORTHO05D007529 1.7e-78 297.7 194 73.7
Cfa014810 Carpinus fangiana HOM05D006155 ORTHO05D007529 2.2e-78 297.4 195 74.4
Dinv27131 Davidia involucrata HOM05D006155 ORTHO05D007529 2.9e-78 297.0 194 77.8
SGA_v2.0_scaffold285G47059 Striga asiatica HOM05D006155 ORTHO05D007529 2.9e-78 297.0 197 72.1
Ah.13g074940 Amaranthus hybridus HOM05D006155 ORTHO05D007529 3.8e-78 296.6 198 71.7
CANSAT78G1287 Cannabis sativa HOM05D006155 ORTHO05D007529 3.8e-78 296.6 178 78.1
BolC3t14563H Brassica oleracea HOM05D006155 ORTHO05D007529 5.0e-78 296.2 192 72.4
Carub.0004s1472 Capsella rubella HOM05D006155 ORTHO05D007529 5.0e-78 296.2 174 77.6
Lj6C638T14 Lonicera japonica HOM05D006155 ORTHO05D007529 5.0e-78 296.2 174 78.2
SalBow3G4628 Salvia bowleyana HOM05D006155 ORTHO05D007529 5.0e-78 296.2 194 72.2
Lsat_1_v5_gn_1_76101 Lactuca sativa HOM05D006155 ORTHO05D007529 6.5e-78 295.8 190 76.3
Manes.15G047200 Manihot esculenta HOM05D006155 ORTHO05D007529 6.5e-78 295.8 207 69.1
Sabra10G0043200 Salix brachista HOM05D006155 ORTHO05D007529 6.5e-78 295.8 195 71.3
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 8.5e-78 295.4 178 74.7
BcaC02g07849 Brassica carinata HOM05D006155 ORTHO05D007529 8.5e-78 295.4 178 74.7
FvH4_4g05140 Fragaria vesca HOM05D006155 ORTHO05D007529 8.5e-78 295.4 173 79.2
HanXRQChr01g0022501 Helianthus annuus HOM05D006155 ORTHO05D007529 8.5e-78 295.4 185 75.7
MBI07_g08907_MAGBIO Magnolia biondii HOM05D006155 ORTHO05D007529 8.5e-78 295.4 162 84.6
Sp4g15560 Schrenkiella parvula HOM05D006155 ORTHO05D007529 8.5e-78 295.4 195 70.3
A03p18670 Brassica napus HOM05D006155 ORTHO05D007529 1.1e-77 295.0 178 75.3
BraA03t11126Z Brassica rapa HOM05D006155 ORTHO05D007529 1.1e-77 295.0 178 75.3
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 1.1e-77 295.0 196 71.4
FAN12G3888 Fragaria x ananassa HOM05D006155 ORTHO05D007529 1.1e-77 295.0 173 79.2
AL4G28890 Arabidopsis lyrata HOM05D006155 ORTHO05D007529 1.5e-77 294.7 174 77.0
arahy.Tifrunner.gnm1.ann1.L647M7 Arachis hypogaea HOM05D006155 ORTHO05D007529 1.5e-77 294.7 224 67.0
Duzib212G0768 Durio zibethinus HOM05D006155 ORTHO05D007529 1.5e-77 294.7 194 73.2
Solyc09g090750.3 Solanum lycopersicum HOM05D006155 ORTHO05D007529 1.5e-77 294.7 193 73.1
DCAR_002295 Daucus carota HOM05D006155 ORTHO05D007529 1.9e-77 294.3 197 72.6
Lju2262C0T14 Lonicera japonica HOM05D006155 ORTHO05D007529 1.9e-77 294.3 174 77.6
Oeu023143.1 Olea europaea HOM05D006155 ORTHO05D007529 1.9e-77 294.3 172 78.5
RcHm_v2.0_Chr4g0396071 Rosa chinensis HOM05D006155 ORTHO05D007529 1.9e-77 294.3 180 75.6
BcaC02g07846 Brassica carinata HOM05D006155 ORTHO05D007529 2.5e-77 293.9 174 75.9
C03p21810 Brassica napus HOM05D006155 ORTHO05D007529 2.5e-77 293.9 192 71.4
FAN22G1742 Fragaria x ananassa HOM05D006155 ORTHO05D007529 2.5e-77 293.9 182 76.4
Sc04g0004680 Simmondsia chinensis HOM05D006155 ORTHO05D007529 2.5e-77 293.9 162 84.0
Sopen09g033690 Solanum pennellii HOM05D006155 ORTHO05D007529 2.5e-77 293.9 170 79.4
Hma1.2p1_0042F.1_g025650 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 3.2e-77 293.5 175 78.3
Nn3g19816 Nelumbo nucifera HOM05D006155 ORTHO05D007529 3.2e-77 293.5 184 76.1
Nitab4.5_0003474g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 4.2e-77 293.1 195 72.3
Aqoxy2G03758 Aquilegia oxysepala HOM05D006155 ORTHO05D007529 5.5e-77 292.7 162 82.7
CAN.G812.29 Capsicum annuum HOM05D006155 ORTHO05D007529 5.5e-77 292.7 180 75.6
Actinidia32965 Actinidia chinensis HOM05D006155 ORTHO05D007529 9.4e-77 292.0 187 75.4
PGR004G1196 Punica granatum HOM05D006155 ORTHO05D007529 9.4e-77 292.0 181 76.8
PGSC0003DMG400001560 Solanum tuberosum HOM05D006155 ORTHO05D007529 9.4e-77 292.0 170 78.8
BcaC01g05849 Brassica carinata HOM05D006155 ORTHO05D007529 1.6e-76 291.2 174 75.9
ECA248G1656 Erigeron canadensis HOM05D006155 ORTHO05D007529 1.6e-76 291.2 176 77.8
Eucgr.H02890 Eucalyptus grandis HOM05D006155 ORTHO05D007529 2.1e-76 290.8 194 71.1
EL10Ac3g06713 Beta vulgaris HOM05D006155 ORTHO05D007529 2.7e-76 290.4 162 83.3
CSS0040589 Camellia sinensis var. sinensis HOM05D006155 ORTHO05D007529 2.7e-76 290.4 197 73.1
Nitab4.5_0002937g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 2.7e-76 290.4 198 71.2
Potri.010G063700 Populus trichocarpa HOM05D006155 ORTHO05D007529 6.1e-76 289.3 194 70.6
MSTRG.24647 Avicennia marina HOM05D006155 ORTHO05D007529 1.4e-75 288.1 173 77.5
Migut.N00320 Erythranthe guttata HOM05D006155 ORTHO05D007529 1.4e-75 288.1 162 82.1
Cc03_g06750 Coffea canephora HOM05D006155 ORTHO05D007529 1.8e-75 287.7 180 75.0
PSO063G0276 Papaver somniferum HOM05D006155 ORTHO05D007529 2.3e-75 287.3 191 73.3
Rhsim09G0042400 Rhododendron simsii HOM05D006155 ORTHO05D007529 3.0e-75 287.0 183 75.4
Actinidia35935 Actinidia chinensis HOM05D006155 ORTHO05D007529 5.2e-75 286.2 162 80.9
FAN17G0987 Fragaria x ananassa HOM05D006155 ORTHO05D007529 6.7e-75 285.8 204 70.6
ClCG05G003860 Citrullus lanatus HOM05D006155 ORTHO05D007529 1.1e-74 285.0 186 73.1
MELO3C006364.2 Cucumis melo HOM05D006155 ORTHO05D007529 2.0e-74 284.3 180 75.0
Lalb_Chr02g0150741 Lupinus albus HOM05D006155 ORTHO05D007529 2.6e-74 283.9 201 68.7
Glyma.10G191200 Glycine max HOM05D006155 ORTHO05D007529 3.3e-74 283.5 192 71.4
Glyma.20G199100 Glycine max HOM05D006155 ORTHO05D007529 5.7e-74 282.7 162 80.9
Phvul.L001872 Phaseolus vulgaris HOM05D006155 ORTHO05D007529 5.7e-74 282.7 169 79.3
VMungo0720G0761 Vigna mungo HOM05D006155 ORTHO05D007529 9.7e-74 282.0 187 72.7
Hund20478 Selenicereus undatus HOM05D006155 ORTHO05D007529 1.3e-73 281.6 162 79.0
GSVIVG01027954001 Vitis vinifera HOM05D006155 ORTHO05D007529 1.7e-73 281.2 169 77.5
CsaV3_3G011540 Cucumis sativus L. HOM05D006155 ORTHO05D007529 2.2e-73 280.8 180 74.4
Peaxi162Scf00125g01318 Petunia axillaris HOM05D006155 ORTHO05D007529 2.8e-73 280.4 197 71.6
CDE02G2305 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 8.2e-73 278.9 183 72.1
unitig_899.g15552 Utricularia gibba HOM05D006155 ORTHO05D007529 2.6e-71 273.9 215 63.7
Sed0003799 Sechium edule HOM05D006155 ORTHO05D007529 4.5e-71 273.1 178 71.9
Ca_09794_v3 Cicer arietinum L. HOM05D006155 ORTHO05D007529 1.0e-70 271.9 188 70.2
Medtr1g073140 Medicago truncatula HOM05D006155 ORTHO05D007529 3.8e-70 270.0 163 76.1
Lj5g0009281 Lotus japonicus HOM05D006155 ORTHO05D007529 1.1e-69 268.5 162 76.5
TPR.G18563 Trifolium pratense HOM05D006155 ORTHO05D007529 4.2e-69 266.5 184 69.0
HPP92_007421 Vanilla planifolia HOM05D006155 ORTHO05D007529 1.6e-68 264.6 191 68.6
vmacro00537 Vaccinium macrocarpon HOM05D006155 ORTHO05D007529 1.4e-67 261.5 279 51.6
Os02g0816100 Oryza sativa ssp. japonica HOM05D006155 ORTHO05D007529 1.5e-66 258.1 167 71.3
Sed0011773 Sechium edule HOM05D006155 ORTHO05D007529 2.4e-64 250.8 169 68.0
ATR0787G199 Amborella trichopoda HOM05D006155 ORTHO05D007529 1.4e-59 235.0 153 69.9
SMO165G0032 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 3.7e-57 226.9 169 63.3
Pp3c17_6550 Physcomitrium patens HOM05D006155 ORTHO05D007529 1.0e-54 218.8 171 62.0
LjContig00022g0011299 Lotus japonicus HOM05D006155 ORTHO05D007529 1.1e-53 215.3 174 62.6
Pp3c2_6750 Physcomitrium patens HOM05D006155 ORTHO05D007529 2.8e-49 200.7 164 57.3
CDE01G0085 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 4.1e-48 196.8 162 60.5
Psat6g138760 Pisum sativum HOM05D006155 ORTHO05D007529 9.5e-45 185.7 128 67.2
QL06p021877 Quercus lobata HOM05D006155 ORTHO05D007529 1.2e-39 168.7 108 71.3
MCO11G090 Micromonas commoda HOM05D006155 ORTHO05D007529 3.6e-36 157.1 173 48.6
CiPaw.01G175800 Carya illinoinensis HOM05D006155 ORTHO05D007529 2.0e-34 151.4 82 79.3
Hma1.2p1_0042F.1_g025660 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 1.3e-33 148.7 95 74.7
Hma1.2p1_0144F.1_g065125 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 1.3e-33 148.7 95 74.7
AUR62035887 Chenopodium quinoa HOM05D006155 ORTHO05D007529 1.7e-33 148.3 112 67.9
Cre03.g193000 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 3.7e-33 147.1 154 50.6
Rhsim09G0043000 Rhododendron simsii HOM05D006155 ORTHO05D007529 8.3e-33 146.0 107 68.2
TAR365G0649 Trochodendron aralioides HOM05D006155 ORTHO05D007529 3.5e-31 140.6 86 74.4
Zm00001eb191500 Zea mays HOM05D006155 ORTHO05D007529 6.0e-31 139.8 119 60.5
Lj5g0004239 Lotus japonicus HOM05D006155 ORTHO05D007529 2.8e-28 131.0 129 55.0
Lj5g0006737 Lotus japonicus HOM05D006155 ORTHO05D007529 2.8e-28 131.0 129 55.0
SEGI_12787 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 3.6e-28 130.6 96 67.7
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.2e-25 121.3 109 60.6
SMO115G0208 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 2.1e-23 114.8 166 41.0
SEGI_32209 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 6.6e-22 109.8 82 65.9
Rhsim09G0048000 Rhododendron simsii HOM05D000029 ORTHO05D002162 1.5e-21 108.6 104 56.7
SGA_v2.0_scaffold31G12610 Striga asiatica HOM05D006155 ORTHO05D007529 8.4e-17 92.8 57 70.2
Actinidia37388 Actinidia chinensis HOM05D006155 ORTHO05D007529 2.1e-15 88.2 45 84.4
SalBow7G2104 Salvia bowleyana HOM05D000708 ORTHO05D001418 3.5e-15 87.4 48 79.2
Cre01.g025100 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 2.3e-14 84.7 159 33.3
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 3.0e-14 84.3 163 35.6
C09p23060 Brassica napus HOM05D006155 ORTHO05D007529 1.6e-12 78.6 57 70.2
AUR62035886 Chenopodium quinoa HOM05D006155 ORTHO05D007529 1.1e-08 65.9 55 56.4
SGA_v2.0_scaffold31G12618 Striga asiatica HOM05D006155 ORTHO05D007529 1.4e-08 65.5 54 55.6


User provided reference genes

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