Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc3.33 Carica papaya HOM05D006803 ORTHO05D008552 1.5e-92 342.8 167 100.0
THA.LOC104825126 Tarenaya hassleriana HOM05D006803 ORTHO05D008552 1.8e-58 229.6 167 64.7
GSVIVG01028745001 Vitis vinifera HOM05D006803 ORTHO05D008552 2.4e-58 229.2 167 68.9
C09p42680 Brassica napus HOM05D006803 ORTHO05D008552 4.0e-58 228.4 167 67.7
BolC9t57144H Brassica oleracea HOM05D006803 ORTHO05D008552 4.0e-58 228.4 167 67.7
COL.COLO4_07418 Corchorus olitorius HOM05D006803 ORTHO05D008552 6.9e-58 227.6 170 68.2
Manes.14G019756 Manihot esculenta HOM05D006803 ORTHO05D008552 6.9e-58 227.6 174 68.4
BraA10t43128Z Brassica rapa HOM05D006803 ORTHO05D008552 1.2e-57 226.9 122 85.2
Carub.0008s1314 Capsella rubella HOM05D006803 ORTHO05D008552 1.2e-57 226.9 172 65.1
Thecc.03G190700 Theobroma cacao HOM05D006803 ORTHO05D008552 1.2e-57 226.9 175 68.0
Sp6g15120 Schrenkiella parvula HOM05D006803 ORTHO05D008552 1.5e-57 226.5 171 66.1
A10p10450 Brassica napus HOM05D006803 ORTHO05D008552 2.0e-57 226.1 177 65.0
Duzib084G0216 Durio zibethinus HOM05D006803 ORTHO05D008552 7.6e-57 224.2 170 68.2
Potri.012G033700 Populus trichocarpa HOM05D006803 ORTHO05D008552 9.9e-57 223.8 163 68.7
MELO3C006968.2 Cucumis melo HOM05D006803 ORTHO05D008552 2.9e-56 222.2 147 72.1
AT5G52960 Arabidopsis thaliana HOM05D006803 ORTHO05D008552 3.8e-56 221.9 172 64.5
ClCG05G008590 Citrullus lanatus HOM05D006803 ORTHO05D008552 3.8e-56 221.9 122 82.8
CiPaw.05G259100 Carya illinoinensis HOM05D006803 ORTHO05D008552 6.4e-56 221.1 172 69.8
Hma1.2p1_0327F.1_g126650 Hydrangea macrophylla HOM05D006803 ORTHO05D008552 1.4e-55 219.9 173 67.6
Gohir.D08G108400 Gossypium hirsutum HOM05D006803 ORTHO05D008552 1.9e-55 219.5 163 68.1
Gorai.004G116000 Gossypium raimondii HOM05D006803 ORTHO05D008552 1.9e-55 219.5 163 68.1
Thhalv10014833m.g Eutrema salsugineum HOM05D006803 ORTHO05D008552 2.4e-55 219.2 172 65.1
Actinidia34181 Actinidia chinensis HOM05D006803 ORTHO05D008552 2.1e-54 216.1 172 65.1
AL8G27460 Arabidopsis lyrata HOM05D006803 ORTHO05D008552 2.1e-54 216.1 171 63.2
TAR333G0006 Trochodendron aralioides HOM05D006803 ORTHO05D008552 2.7e-54 215.7 161 70.2
Aa31LG3G9190 Aethionema arabicum HOM05D006803 ORTHO05D008552 3.5e-54 215.3 171 62.0
Dinv28351 Davidia involucrata HOM05D006803 ORTHO05D008552 4.6e-54 214.9 165 66.1
FAN06G1048 Fragaria x ananassa HOM05D006803 ORTHO05D008552 4.6e-54 214.9 121 82.6
FAN06G4527 Fragaria x ananassa HOM05D006803 ORTHO05D008552 4.6e-54 214.9 121 82.6
RcHm_v2.0_Chr1g0379821 Rosa chinensis HOM05D006803 ORTHO05D008552 4.6e-54 214.9 167 64.7
FAN10G2870 Fragaria x ananassa HOM05D006803 ORTHO05D008552 6.0e-54 214.5 126 81.0
FAN03G2299 Fragaria x ananassa HOM05D006803 ORTHO05D008552 7.9e-54 214.2 126 80.2
Ciclev10006070m.g Citrus clementina HOM05D006803 ORTHO05D008552 1.0e-53 213.8 174 66.1
FvH4_7g30800 Fragaria vesca HOM05D006803 ORTHO05D008552 1.0e-53 213.8 121 81.8
Nn1g01776 Nelumbo nucifera HOM05D006803 ORTHO05D008552 1.0e-53 213.8 169 66.3
Gohir.A08G097600 Gossypium hirsutum HOM05D006803 ORTHO05D008552 2.3e-53 212.6 163 66.3
Prupe.2G305500 Prunus persica HOM05D006803 ORTHO05D008552 2.3e-53 212.6 169 67.5
FAN01G0710 Fragaria x ananassa HOM05D006803 ORTHO05D008552 3.0e-53 212.2 121 81.8
QL09p011586 Quercus lobata HOM05D006803 ORTHO05D008552 3.9e-53 211.8 131 77.1
Peaxi162Scf00904g00457 Petunia axillaris HOM05D006803 ORTHO05D008552 6.7e-53 211.1 159 67.9
Eucgr.K00316 Eucalyptus grandis HOM05D006803 ORTHO05D008552 1.1e-52 210.3 140 75.7
Atru.chr1.293 Acer truncatum HOM05D006803 ORTHO05D008552 1.9e-52 209.5 180 63.3
Oeu044167.1 Olea europaea HOM05D006803 ORTHO05D008552 1.9e-52 209.5 172 64.0
MBI06_g04289_MAGBIO Magnolia biondii HOM05D006803 ORTHO05D008552 4.3e-52 208.4 125 80.8
MD07G1283300 Malus domestica HOM05D006803 ORTHO05D008552 4.3e-52 208.4 124 78.2
Duzib205G0804 Durio zibethinus HOM05D006803 ORTHO05D008552 9.6e-52 207.2 161 66.5
TWI14G0759 Tripterygium wilfordii HOM05D006803 ORTHO05D008552 9.6e-52 207.2 180 64.4
MD01G1213500 Malus domestica HOM05D006803 ORTHO05D008552 1.3e-51 206.8 171 63.2
Actinidia08612 Actinidia chinensis HOM05D006803 ORTHO05D008552 1.6e-51 206.5 172 64.5
Sed0009140 Sechium edule HOM05D006803 ORTHO05D008552 2.1e-51 206.1 169 62.1
arahy.Tifrunner.gnm1.ann1.GHK1U8 Arachis hypogaea HOM05D006803 ORTHO05D008552 4.8e-51 204.9 158 65.8
arahy.Tifrunner.gnm1.ann1.V6YLC6 Arachis hypogaea HOM05D006803 ORTHO05D008552 4.8e-51 204.9 158 65.8
HanXRQChr09g0253111 Helianthus annuus HOM05D006803 ORTHO05D008552 4.8e-51 204.9 153 62.7
vmacro06587 Vaccinium macrocarpon HOM05D006803 ORTHO05D008552 4.8e-51 204.9 180 60.6
TPR.G36689 Trifolium pratense HOM05D006803 ORTHO05D008552 6.2e-51 204.5 180 60.0
Aqoxy7G00212 Aquilegia oxysepala HOM05D006803 ORTHO05D008552 8.2e-51 204.1 142 71.8
CAN.G108.11 Capsicum annuum HOM05D006803 ORTHO05D008552 2.4e-50 202.6 162 63.6
unitig_37.g11977 Utricularia gibba HOM05D000211 ORTHO05D002285 3.1e-50 202.2 112 82.1
Lj3C914T13 Lonicera japonica HOM05D006803 ORTHO05D008552 4.0e-50 201.8 161 64.0
Glyma.09G125800 Glycine max HOM05D006803 ORTHO05D008552 5.3e-50 201.4 156 64.7
Potri.016G123100 Populus trichocarpa HOM05D006803 ORTHO05D008552 5.3e-50 201.4 146 67.1
SGA_v2.0_scaffold44G16771 Striga asiatica HOM05D006803 ORTHO05D008552 5.3e-50 201.4 134 72.4
Ca_19336_v3 Cicer arietinum L. HOM05D006803 ORTHO05D008552 2.0e-49 199.5 176 61.4
Lsat_1_v5_gn_9_57340 Lactuca sativa HOM05D006803 ORTHO05D008552 2.0e-49 199.5 137 67.2
Hund11694 Selenicereus undatus HOM05D006803 ORTHO05D008552 2.0e-49 199.5 163 63.8
Sabra15G0018100 Salix brachista HOM05D006803 ORTHO05D008552 2.6e-49 199.1 194 55.2
EL10Ac3g05364 Beta vulgaris HOM05D006803 ORTHO05D008552 4.5e-49 198.4 164 59.1
Sabra15G0020600 Salix brachista HOM05D006803 ORTHO05D008552 7.6e-49 197.6 198 54.5
PSO384G2893 Papaver somniferum HOM05D006803 ORTHO05D008552 1.0e-48 197.2 164 62.8
Solyc03g007540.3 Solanum lycopersicum HOM05D006803 ORTHO05D008552 1.0e-48 197.2 167 62.3
PGSC0003DMG400009065 Solanum tuberosum HOM05D006803 ORTHO05D008552 1.0e-48 197.2 167 62.3
VMungo0464G0281 Vigna mungo HOM05D006803 ORTHO05D008552 1.3e-48 196.8 137 73.0
Cc02_g02040 Coffea canephora HOM05D006803 ORTHO05D008552 1.7e-48 196.4 97 90.7
Migut.F00254 Erythranthe guttata HOM05D006803 ORTHO05D008552 1.7e-48 196.4 128 73.4
PSO135G0887 Papaver somniferum HOM05D006803 ORTHO05D008552 1.7e-48 196.4 162 63.0
Sopen03g003500 Solanum pennellii HOM05D006803 ORTHO05D008552 1.7e-48 196.4 167 62.3
SalBow4G1856 Salvia bowleyana HOM05D006803 ORTHO05D008552 2.2e-48 196.1 171 62.6
SalBow4G1881 Salvia bowleyana HOM05D006803 ORTHO05D008552 2.2e-48 196.1 171 62.6
TWI39G0241 Tripterygium wilfordii HOM05D006803 ORTHO05D008552 2.9e-48 195.7 144 70.8
CDE03G0029 Ceratophyllum demersum HOM05D006803 ORTHO05D008552 6.5e-48 194.5 139 69.1
Glyma.16G172700 Glycine max HOM05D006803 ORTHO05D008552 8.4e-48 194.1 157 61.1
ECA232G4170 Erigeron canadensis HOM05D006803 ORTHO05D008552 1.1e-47 193.7 157 62.4
Psat1g097000 Pisum sativum HOM05D006803 ORTHO05D008552 1.1e-47 193.7 177 59.9
Lj2g0024519 Lotus japonicus HOM05D006803 ORTHO05D008552 1.4e-47 193.4 166 62.7
Phvul.004G101300 Phaseolus vulgaris HOM05D006803 ORTHO05D008552 1.4e-47 193.4 138 71.0
CDE04G2534 Ceratophyllum demersum HOM05D006803 ORTHO05D008552 1.9e-47 193.0 117 75.2
PGR142G1334 Punica granatum HOM05D006803 ORTHO05D008552 1.9e-47 193.0 168 60.7
ATR0721G182 Amborella trichopoda HOM05D006803 ORTHO05D008552 3.2e-47 192.2 166 60.2
CSS0034587 Camellia sinensis var. sinensis HOM05D006803 ORTHO05D008552 3.2e-47 192.2 96 87.5
Sc19g0001080 Simmondsia chinensis HOM05D006803 ORTHO05D008552 3.2e-47 192.2 174 58.6
DCAR_014527 Daucus carota HOM05D006803 ORTHO05D008552 5.5e-47 191.4 154 60.4
CANSAT21G0672 Cannabis sativa HOM05D006803 ORTHO05D008552 9.3e-47 190.7 163 58.3
Lalb_Chr01g0009661 Lupinus albus HOM05D006803 ORTHO05D008552 2.1e-46 189.5 146 66.4
Sabra12G0022800 Salix brachista HOM05D006803 ORTHO05D008552 4.6e-46 188.3 243 46.1
Sed0024434 Sechium edule HOM05D006803 ORTHO05D008552 4.6e-46 188.3 159 58.5
Medtr6g034205 Medicago truncatula HOM05D006803 ORTHO05D008552 1.0e-45 187.2 150 62.7
Rhsim03G0197200 Rhododendron simsii HOM05D006803 ORTHO05D008552 2.3e-45 186.0 98 84.7
Mapoly0006s0111 Marchantia polymorpha HOM05D006803 ORTHO05D008552 6.7e-45 184.5 97 78.4
Os05g0569200 Oryza sativa ssp. japonica HOM05D006803 ORTHO05D008552 1.9e-44 183.0 99 82.8
Zm00001eb296320 Zea mays HOM05D006803 ORTHO05D008552 3.3e-44 182.2 99 82.8
SEGI_13941 Sequoiadendron giganteum HOM05D006803 ORTHO05D008552 2.2e-43 179.5 99 80.8
SMO169G0228 Selaginella moellendorffii HOM05D006803 ORTHO05D008552 1.7e-40 169.9 116 63.8
AagrBONN_evm.TU.Sc2ySwM_228.1351 Anthoceros agrestis HOM05D006803 ORTHO05D008552 2.2e-40 169.5 92 80.4
Pp3c4_26620 Physcomitrium patens HOM05D006803 ORTHO05D008552 7.2e-39 164.5 91 76.9
CARHR265930 Cardamine hirsuta HOM05D006803 ORTHO05D008552 1.2e-38 163.7 136 61.0
Haze_00093 Corylus avellana HOM05D006803 ORTHO05D008552 4.6e-38 161.8 138 65.9
Nitab4.5_0000472g0050 Nicotiana tabacum HOM05D006803 ORTHO05D008552 1.8e-37 159.8 165 55.2
Pp3c26_8430 Physcomitrium patens HOM05D006803 ORTHO05D008552 8.8e-37 157.5 88 76.1
BcaB08g35659 Brassica carinata HOM05D006803 ORTHO05D008552 1.5e-36 156.8 142 59.9
Nitab4.5_0001331g0090 Nicotiana tabacum HOM05D006803 ORTHO05D008552 2.5e-36 156.0 168 54.2
CBR_g9073 Chara braunii HOM05D006803 ORTHO05D008552 2.2e-32 142.9 99 65.7
Eucgr.L03342 Eucalyptus grandis HOM05D006803 ORTHO05D008552 7.2e-31 137.9 105 66.7
HPP92_011456 Vanilla planifolia HOM05D006803 ORTHO05D008552 1.1e-26 124.0 65 86.2
Oeu059677.1 Olea europaea HOM05D006803 ORTHO05D008552 4.5e-25 118.6 84 61.9
Oeu008094.1 Olea europaea HOM05D006803 ORTHO05D008552 8.0e-22 107.8 66 66.7
Oeu059693.1 Olea europaea HOM05D006803 ORTHO05D008552 5.2e-21 105.1 127 46.5
Thecc.03G190900 Theobroma cacao HOM05D006803 ORTHO05D008552 3.3e-12 75.9 36 97.2
RcHm_v2.0_Chr1g0379761 Rosa chinensis HOM05D006803 ORTHO05D008552 3.7e-11 72.4 35 91.4


User provided reference genes

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