Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc3.322 Carica papaya HOM05D002915 ORTHO05D003004 6.5e-58 227.3 120 100.0
HanXRQChr08g0207481 Helianthus annuus HOM05D002915 ORTHO05D003004 1.2e-14 83.6 105 40.0
CiPaw.06G099700 Carya illinoinensis HOM05D002915 ORTHO05D003004 1.5e-14 83.2 101 39.6
Oeu033490.1 Olea europaea HOM05D002915 ORTHO05D003004 1.5e-14 83.2 87 50.6
Haze_14809 Corylus avellana HOM05D002915 ORTHO05D003004 4.4e-14 81.6 104 41.3
Migut.C00066 Erythranthe guttata HOM05D002915 ORTHO05D003004 4.4e-14 81.6 100 42.0
Thecc.03G155900 Theobroma cacao HOM05D002915 ORTHO05D003004 4.4e-14 81.6 118 41.5
DCAR_016182 Daucus carota HOM05D002915 ORTHO05D003004 5.7e-14 81.3 90 45.6
TAR629G0865 Trochodendron aralioides HOM05D002915 ORTHO05D003004 7.5e-14 80.9 105 43.8
Migut.C00063 Erythranthe guttata HOM05D002915 ORTHO05D003004 1.3e-13 80.1 100 42.0
Lj4g0008862 Lotus japonicus HOM05D002915 ORTHO05D003004 1.7e-13 79.7 116 38.8
TWI09G1418 Tripterygium wilfordii HOM05D002915 ORTHO05D003004 1.7e-13 79.7 98 40.8
CSS0045033 Camellia sinensis var. sinensis HOM05D002915 ORTHO05D003004 2.2e-13 79.3 87 44.8
Lsat_1_v5_gn_8_150181 Lactuca sativa HOM05D000825 ORTHO05D003684 2.2e-13 79.3 114 36.0
vmacro16134 Vaccinium macrocarpon HOM05D002915 ORTHO05D003004 2.2e-13 79.3 87 46.0
Haze_24934 Corylus avellana HOM05D002915 ORTHO05D003004 3.7e-13 78.6 104 40.4
FAN26G0404 Fragaria x ananassa HOM05D002915 ORTHO05D003004 3.7e-13 78.6 112 36.6
Dinv14798 Davidia involucrata HOM05D002915 ORTHO05D003004 4.8e-13 78.2 111 39.6
Migut.F00476 Erythranthe guttata HOM05D002915 ORTHO05D003004 4.8e-13 78.2 85 45.9
Lalb_Chr13g0303601 Lupinus albus HOM05D002915 ORTHO05D003004 4.8e-13 78.2 100 41.0
TAR629G0058 Trochodendron aralioides HOM05D002915 ORTHO05D003004 4.8e-13 78.2 112 42.9
CiPaw.05G115500 Carya illinoinensis HOM05D002915 ORTHO05D003004 6.3e-13 77.8 97 40.2
Migut.H01084 Erythranthe guttata HOM05D002915 ORTHO05D003004 6.3e-13 77.8 100 40.0
Lj6A815T43 Lonicera japonica HOM05D002915 ORTHO05D003004 6.3e-13 77.8 116 36.2
DCAR_018111 Daucus carota HOM05D002915 ORTHO05D003004 8.3e-13 77.4 85 43.5
Potri.013G008800 Populus trichocarpa HOM05D002915 ORTHO05D003004 8.3e-13 77.4 100 42.0
Prupe.1G137300 Prunus persica HOM05D002915 ORTHO05D003004 8.3e-13 77.4 102 36.3
Cfa002665 Carpinus fangiana HOM05D002915 ORTHO05D003004 1.1e-12 77.0 104 40.4
Thhalv10019573m.g Eutrema salsugineum HOM05D002915 ORTHO05D003004 1.1e-12 77.0 98 38.8
FAN19G1392 Fragaria x ananassa HOM05D002915 ORTHO05D003004 1.1e-12 77.0 104 35.6
Lj6A821T72 Lonicera japonica HOM05D002915 ORTHO05D003004 1.4e-12 76.6 91 39.6
QL03p054762 Quercus lobata HOM05D002915 ORTHO05D003004 1.8e-12 76.3 113 38.1
RcHm_v2.0_Chr4g0422141 Rosa chinensis HOM05D002915 ORTHO05D003004 1.8e-12 76.3 111 36.0
CiPaw.05G115300 Carya illinoinensis HOM05D002915 ORTHO05D003004 2.4e-12 75.9 97 40.2
MD16G1169500 Malus domestica HOM05D002915 ORTHO05D003004 2.4e-12 75.9 98 38.8
Rhsim12G0105300 Rhododendron simsii HOM05D002915 ORTHO05D003004 2.4e-12 75.9 87 46.0
Aqoxy1G01229 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 3.1e-12 75.5 85 47.1
Hma1.2p1_0167F.1_g073810 Hydrangea macrophylla HOM05D002915 ORTHO05D003004 4.1e-12 75.1 87 42.5
Cc00_g09710 Coffea canephora HOM05D002915 ORTHO05D003004 5.4e-12 74.7 88 45.5
Gohir.A11G040100 Gossypium hirsutum HOM05D002915 ORTHO05D003004 5.4e-12 74.7 105 42.9
CiPaw.05G115400 Carya illinoinensis HOM05D002915 ORTHO05D003004 7.0e-12 74.3 97 39.2
TPR.G3196 Trifolium pratense HOM05D002915 ORTHO05D003004 7.0e-12 74.3 85 41.2
CAN.G1143.27 Capsicum annuum HOM05D002915 ORTHO05D003004 9.1e-12 73.9 102 40.2
Lj3g0023229 Lotus japonicus HOM05D002915 ORTHO05D003004 9.1e-12 73.9 88 40.9
Psat4g025920 Pisum sativum HOM05D002915 ORTHO05D003004 9.1e-12 73.9 108 38.0
Cc03_g08730 Coffea canephora HOM05D002915 ORTHO05D003004 1.2e-11 73.6 88 43.2
Medtr5g033770 Medicago truncatula HOM05D002915 ORTHO05D003004 1.2e-11 73.6 106 35.8
Lj1g0003622 Lotus japonicus HOM05D002915 ORTHO05D003004 1.6e-11 73.2 103 39.8
TAR374G0847 Trochodendron aralioides HOM05D002915 ORTHO05D003004 1.6e-11 73.2 112 41.1
MD16G1170100 Malus domestica HOM05D002915 ORTHO05D003004 2.0e-11 72.8 104 36.5
PGSC0003DMG400037269 Solanum tuberosum HOM05D002915 ORTHO05D003004 2.0e-11 72.8 111 40.5
Aqoxy4G02244 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 2.7e-11 72.4 85 42.4
Rhsim02G0221300 Rhododendron simsii HOM05D002915 ORTHO05D003004 2.7e-11 72.4 87 43.7
Cc00_g21400 Coffea canephora HOM05D002915 ORTHO05D003004 3.5e-11 72.0 88 42.0
DCAR_018110 Daucus carota HOM05D002915 ORTHO05D003004 3.5e-11 72.0 106 39.6
ECA233G1149 Erigeron canadensis HOM05D000825 ORTHO05D003004 3.5e-11 72.0 106 35.8
PGSC0003DMG400021580 Solanum tuberosum HOM05D002915 ORTHO05D003004 3.5e-11 72.0 91 41.8
Actinidia25760 Actinidia chinensis HOM05D002915 ORTHO05D003004 4.5e-11 71.6 87 41.4
Glyma.07G247800 Glycine max HOM05D002915 ORTHO05D003004 4.5e-11 71.6 104 38.5
Sabra13G0007400 Salix brachista HOM05D002915 ORTHO05D003004 4.5e-11 71.6 84 41.7
CAN.G853.27 Capsicum annuum HOM05D002915 ORTHO05D003004 5.9e-11 71.2 103 39.8
Manes.12G014800 Manihot esculenta HOM05D002915 ORTHO05D003004 7.7e-11 70.9 103 39.8
Cc08_g03020 Coffea canephora HOM05D002915 ORTHO05D003004 1.0e-10 70.5 88 43.2
PGR142G3351 Punica granatum HOM05D002915 ORTHO05D003004 1.0e-10 70.5 87 41.4
Psat0s1573g0120 Pisum sativum HOM05D002915 ORTHO05D003004 1.7e-10 69.7 105 35.2
Rhsim13G0213700 Rhododendron simsii HOM05D002915 ORTHO05D003004 1.7e-10 69.7 87 41.4
Dinv28571 Davidia involucrata HOM05D002915 ORTHO05D003004 2.3e-10 69.3 89 39.3
Lalb_Chr18g0050831 Lupinus albus HOM05D002915 ORTHO05D003004 2.3e-10 69.3 113 41.6
Cc11_g03110 Coffea canephora HOM05D002915 ORTHO05D003004 2.9e-10 68.9 88 40.9
Gorai.007G046700 Gossypium raimondii HOM05D002915 ORTHO05D003004 2.9e-10 68.9 105 41.0
Lj2g0026934 Lotus japonicus HOM05D002915 ORTHO05D003004 3.8e-10 68.6 80 41.2
Medtr4g119850 Medicago truncatula HOM05D002915 ORTHO05D003004 3.8e-10 68.6 87 36.8
PSO832G1590 Papaver somniferum HOM05D002915 ORTHO05D003004 3.8e-10 68.6 87 39.1
Rhsim12G0105400 Rhododendron simsii HOM05D002915 ORTHO05D003004 3.8e-10 68.6 87 43.7
Cc02_g04260 Coffea canephora HOM05D002915 ORTHO05D003004 5.0e-10 68.2 87 44.8
FAN12G2317 Fragaria x ananassa HOM05D002915 ORTHO05D003004 5.0e-10 68.2 85 37.6
FAN17G1773 Fragaria x ananassa HOM05D002915 ORTHO05D003004 6.6e-10 67.8 100 34.0
Manes.12G023850 Manihot esculenta HOM05D002915 ORTHO05D003004 6.6e-10 67.8 103 36.9
FAN07G0523 Fragaria x ananassa HOM05D002915 ORTHO05D003004 8.6e-10 67.4 99 34.3
Lj4g0025234 Lotus japonicus HOM05D002915 ORTHO05D003004 1.1e-09 67.0 108 38.0
Potri.001G321400 Populus trichocarpa HOM05D002915 ORTHO05D003004 1.1e-09 67.0 84 40.5
SGA_v2.0_scaffold51G18778 Striga asiatica HOM05D002915 ORTHO05D003004 1.1e-09 67.0 88 44.3
Ciclev10006753m.g Citrus clementina HOM05D002915 ORTHO05D003004 1.5e-09 66.6 81 44.4
Lalb_Chr10g0105601 Lupinus albus HOM05D002915 ORTHO05D003004 1.5e-09 66.6 77 46.8
THA.LOC104810144 Tarenaya hassleriana HOM05D002915 ORTHO05D003004 1.5e-09 66.6 106 37.7
Eucgr.H01273 Eucalyptus grandis HOM05D002915 ORTHO05D003004 1.9e-09 66.2 83 37.3
Lj2g0014982 Lotus japonicus HOM05D002915 ORTHO05D003004 1.9e-09 66.2 114 37.7
Manes.11G084185 Manihot esculenta HOM05D002915 ORTHO05D003004 2.5e-09 65.9 111 34.2
Atru.chr11.2244 Acer truncatum HOM05D002915 ORTHO05D003004 3.3e-09 65.5 87 37.9
Atru.chr11.2259 Acer truncatum HOM05D002915 ORTHO05D003004 3.3e-09 65.5 87 37.9
Ca_21504_v3 Cicer arietinum L. HOM05D002915 ORTHO05D003004 3.3e-09 65.5 106 36.8
Phvul.002G142400 Phaseolus vulgaris HOM05D002915 ORTHO05D003004 3.3e-09 65.5 86 37.2
FAN23G0131 Fragaria x ananassa HOM05D002915 ORTHO05D003004 4.2e-09 65.1 74 39.2
Sp5g30010 Schrenkiella parvula HOM05D002915 ORTHO05D003004 4.2e-09 65.1 85 35.3
Lj4g0014849 Lotus japonicus HOM05D002915 ORTHO05D003004 5.5e-09 64.7 99 35.4
Lj5g0000576 Lotus japonicus HOM05D002915 ORTHO05D003004 5.5e-09 64.7 101 36.6
Lj6g0019512 Lotus japonicus HOM05D002915 ORTHO05D003004 5.5e-09 64.7 81 42.0
Medtr3g075360 Medicago truncatula HOM05D002915 ORTHO05D003004 5.5e-09 64.7 98 34.7
Hund03449 Selenicereus undatus HOM05D002915 ORTHO05D003004 5.5e-09 64.7 83 39.8
Lj4g0002182 Lotus japonicus HOM05D002915 ORTHO05D003004 7.2e-09 64.3 83 37.3
PSO339G6727 Papaver somniferum HOM05D002915 ORTHO05D003004 7.2e-09 64.3 91 37.4
PSO384G2811 Papaver somniferum HOM05D002915 ORTHO05D003004 7.2e-09 64.3 87 40.2
PSO384G3355 Papaver somniferum HOM05D002915 ORTHO05D003004 7.2e-09 64.3 87 40.2
PGSC0003DMG400040843 Solanum tuberosum HOM05D002915 ORTHO05D003004 7.2e-09 64.3 87 42.5
PGSC0003DMG400043877 Solanum tuberosum HOM05D002915 ORTHO05D003004 7.2e-09 64.3 86 43.0
SGA_v2.0_scaffold169G38697 Striga asiatica HOM05D002915 ORTHO05D003004 7.2e-09 64.3 88 35.2
Atru.chr1.711 Acer truncatum HOM05D002915 ORTHO05D003004 9.5e-09 63.9 86 37.2
CsaV3_5G029620 Cucumis sativus L. HOM05D002915 ORTHO05D003004 9.5e-09 63.9 108 35.2
Lj1g0028201 Lotus japonicus HOM05D002915 ORTHO05D003004 9.5e-09 63.9 112 38.4
Manes.13G015600 Manihot esculenta HOM05D002915 ORTHO05D003004 9.5e-09 63.9 100 37.0
TPR.G23884 Trifolium pratense HOM05D002915 ORTHO05D003004 9.5e-09 63.9 89 41.6
Lj4g0001673 Lotus japonicus HOM05D002915 ORTHO05D003004 1.2e-08 63.5 110 35.5
Atru.chr11.2288 Acer truncatum HOM05D002915 ORTHO05D003004 1.6e-08 63.2 86 38.4
Glyma.17G026300 Glycine max HOM05D002915 ORTHO05D003004 1.6e-08 63.2 99 37.4
Gohir.D11G043350 Gossypium hirsutum HOM05D002915 ORTHO05D003004 1.6e-08 63.2 105 41.0
Lj6g0013707 Lotus japonicus HOM05D002915 ORTHO05D003004 1.6e-08 63.2 80 42.5
PSO782G5303 Papaver somniferum HOM05D002915 ORTHO05D003004 2.1e-08 62.8 88 39.8
Atru.chr1.712 Acer truncatum HOM05D002915 ORTHO05D003004 2.8e-08 62.4 86 36.0
Lj3g0026757 Lotus japonicus HOM05D002915 ORTHO05D003004 2.8e-08 62.4 77 40.3
Aqoxy1G00479 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 3.6e-08 62.0 85 37.6
ClCG11G013100 Citrullus lanatus HOM05D002915 ORTHO05D003004 3.6e-08 62.0 113 34.5
Ciclev10033456m.g Citrus clementina HOM05D002915 ORTHO05D003004 3.6e-08 62.0 107 37.4
Migut.H01190 Erythranthe guttata HOM05D002915 ORTHO05D003004 3.6e-08 62.0 80 41.2
Lj5g0016376 Lotus japonicus HOM05D002915 ORTHO05D003004 3.6e-08 62.0 99 37.4
Glyma.02G238900 Glycine max HOM05D002915 ORTHO05D003004 4.7e-08 61.6 89 38.2
Sopen04g019620 Solanum pennellii HOM05D000002 ORTHO05D000001 4.7e-08 61.6 90 37.8
Thecc.09G039200 Theobroma cacao HOM05D002915 ORTHO05D003004 4.7e-08 61.6 87 36.8
TAR629G2135 Trochodendron aralioides HOM05D002915 ORTHO05D003004 8.0e-08 60.8 80 37.5
Lj3g0011377 Lotus japonicus HOM05D002915 ORTHO05D003004 1.0e-07 60.5 77 40.3
Lj5g0020165 Lotus japonicus HOM05D002915 ORTHO05D003004 1.0e-07 60.5 101 36.6
Sed0005801 Sechium edule HOM05D002915 ORTHO05D003004 1.0e-07 60.5 87 34.5
Thhalv10019642m.g Eutrema salsugineum HOM05D002915 ORTHO05D003004 2.3e-07 59.3 84 35.7
arahy.Tifrunner.gnm1.ann1.J68HPB Arachis hypogaea HOM05D002915 ORTHO05D003004 5.2e-07 58.2 97 38.1
arahy.Tifrunner.gnm1.ann1.JTPM3R Arachis hypogaea HOM05D000176 ORTHO05D000106 5.2e-07 58.2 71 45.1
Nn1g09544 Nelumbo nucifera HOM05D002915 ORTHO05D003004 1.2e-06 57.0 84 35.7
Cc05_g03590 Coffea canephora HOM05D002915 ORTHO05D003004 1.5e-06 56.6 89 43.8
CANSAT64G2697 Cannabis sativa HOM05D002915 ORTHO05D003004 2.0e-06 56.2 86 33.7
ECA234G1395 Erigeron canadensis HOM05D004805 ORTHO05D005756 2.0e-06 56.2 98 32.7
AT1G67623 Arabidopsis thaliana HOM05D002915 ORTHO05D003004 2.6e-06 55.8 85 37.6
PGSC0003DMG400019090 Solanum tuberosum HOM05D002915 ORTHO05D003004 2.6e-06 55.8 86 40.7
CARHR060200 Cardamine hirsuta HOM05D002915 ORTHO05D003004 3.4e-06 55.5 108 31.5
BraA07t31040Z Brassica rapa HOM05D006725 ORTHO05D008223 5.7e-06 54.7 113 31.0
Carub.0002s1396 Capsella rubella HOM05D002915 ORTHO05D003004 5.7e-06 54.7 85 34.1
FAN28G1700 Fragaria x ananassa HOM05D002915 ORTHO05D003004 5.7e-06 54.7 61 39.3
FAN28G2009 Fragaria x ananassa HOM05D002915 ORTHO05D003004 5.7e-06 54.7 61 39.3
FAN28G2017 Fragaria x ananassa HOM05D002915 ORTHO05D003004 5.7e-06 54.7 61 39.3
BcaB03g15181 Brassica carinata HOM05D002915 ORTHO05D003004 7.5e-06 54.3 109 30.3
MELO3C034049.2 Cucumis melo HOM05D002915 ORTHO05D003004 7.5e-06 54.3 117 30.8
A07p34150 Brassica napus HOM05D002915 ORTHO05D003004 9.8e-06 53.9 113 31.0
BolC6t39177H Brassica oleracea HOM05D002915 ORTHO05D003004 9.8e-06 53.9 113 31.0
Dinv28573 Davidia involucrata HOM05D002915 ORTHO05D003004 9.8e-06 53.9 89 37.1
TWI09G1125 Tripterygium wilfordii HOM05D002915 ORTHO05D003004 9.8e-06 53.9 65 41.5


User provided reference genes

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