Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc3.292 Carica papaya HOM05D007220 ORTHO05D009058 2.0e-85 319.3 191 100.0
Manes.14G034000 Manihot esculenta HOM05D007220 ORTHO05D009058 4.9e-52 208.4 200 59.5
Thecc.03G158900 Theobroma cacao HOM05D007220 ORTHO05D009058 1.9e-51 206.5 195 67.2
COL.COLO4_14153 Corchorus olitorius HOM05D007220 ORTHO05D009058 9.6e-48 194.1 195 68.7
THA.LOC104811513 Tarenaya hassleriana HOM05D007220 ORTHO05D009058 4.1e-46 188.7 179 61.5
MD01G1184500 Malus domestica HOM05D007220 ORTHO05D009058 2.0e-45 186.4 188 59.6
Haze_13838 Corylus avellana HOM05D007220 ORTHO05D009058 2.6e-45 186.0 203 55.2
Cfa008220 Carpinus fangiana HOM05D007220 ORTHO05D009058 1.7e-44 183.3 206 54.4
BcaC01g06128 Brassica carinata HOM05D007220 ORTHO05D009058 3.8e-44 182.2 193 53.4
C03p18980 Brassica napus HOM05D007220 ORTHO05D009058 3.8e-44 182.2 193 53.4
BolC3t14287H Brassica oleracea HOM05D007220 ORTHO05D009058 3.8e-44 182.2 193 53.4
BraA03t10902Z Brassica rapa HOM05D007220 ORTHO05D009058 3.8e-44 182.2 198 53.5
Duzib205G1715 Durio zibethinus HOM05D007220 ORTHO05D009058 8.5e-44 181.0 195 55.4
Gohir.D07G043100 Gossypium hirsutum HOM05D007220 ORTHO05D009058 8.5e-44 181.0 106 84.0
Sabra15G0142900 Salix brachista HOM05D007220 ORTHO05D009058 8.5e-44 181.0 191 64.4
BcaB01g04168 Brassica carinata HOM05D007220 ORTHO05D009058 1.1e-43 180.6 193 59.1
Potri.015G129600 Populus trichocarpa HOM05D007220 ORTHO05D009058 1.1e-43 180.6 192 65.6
Gohir.A07G038900 Gossypium hirsutum HOM05D007220 ORTHO05D009058 1.4e-43 180.3 106 84.0
Gorai.001G046100 Gossypium raimondii HOM05D007220 ORTHO05D009058 1.4e-43 180.3 106 84.0
Actinidia25024 Actinidia chinensis HOM05D007220 ORTHO05D009058 2.5e-43 179.5 187 67.4
Dinv28549 Davidia involucrata HOM05D007220 ORTHO05D009058 4.2e-43 178.7 195 53.8
AL8G25850 Arabidopsis lyrata HOM05D007220 ORTHO05D009058 5.5e-43 178.3 198 50.0
Sp6g13740 Schrenkiella parvula HOM05D007220 ORTHO05D009058 7.2e-43 177.9 193 58.0
FAN06G4318 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.6e-42 176.8 191 55.0
ClCG05G007450 Citrullus lanatus HOM05D007220 ORTHO05D009058 2.1e-42 176.4 203 52.2
Eucgr.A02878 Eucalyptus grandis HOM05D007220 ORTHO05D009058 3.6e-42 175.6 167 63.5
TWI39G1186 Tripterygium wilfordii HOM05D007220 ORTHO05D009058 3.6e-42 175.6 202 51.5
AT5G51545 Arabidopsis thaliana HOM05D007220 ORTHO05D009058 4.6e-42 175.3 193 52.8
FvH4_7g27960 Fragaria vesca HOM05D007220 ORTHO05D009058 6.1e-42 174.9 191 54.5
FAN06G0674 Fragaria x ananassa HOM05D007220 ORTHO05D009058 6.1e-42 174.9 191 59.2
CiPaw.04G061800 Carya illinoinensis HOM05D007220 ORTHO05D009058 7.9e-42 174.5 205 60.5
FAN03G0488 Fragaria x ananassa HOM05D007220 ORTHO05D009058 7.9e-42 174.5 191 54.5
FAN03G2818 Fragaria x ananassa HOM05D007220 ORTHO05D009058 7.9e-42 174.5 191 54.5
FAN10G3220 Fragaria x ananassa HOM05D007220 ORTHO05D009058 7.9e-42 174.5 191 58.6
GSVIVG01018558001 Vitis vinifera HOM05D007220 ORTHO05D009058 1.0e-41 174.1 187 54.5
PGR042G1708 Punica granatum HOM05D007220 ORTHO05D009058 1.3e-41 173.7 106 79.2
Atru.chr1.664 Acer truncatum HOM05D007220 ORTHO05D009058 1.8e-41 173.3 194 64.4
RcHm_v2.0_Chr1g0374911 Rosa chinensis HOM05D007220 ORTHO05D009058 3.9e-41 172.2 185 53.5
Dinv22967 Davidia involucrata HOM05D007220 ORTHO05D009058 5.1e-41 171.8 211 54.0
CsaV3_3G016270 Cucumis sativus L. HOM05D007220 ORTHO05D009058 6.7e-41 171.4 200 52.0
QL09p019051 Quercus lobata HOM05D007220 ORTHO05D009058 6.7e-41 171.4 204 65.7
Cc02_g04040 Coffea canephora HOM05D007220 ORTHO05D009058 8.7e-41 171.0 209 48.3
FAN01G2832 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.1e-40 170.6 191 58.1
A03p16110 Brassica napus HOM05D007220 ORTHO05D009058 1.5e-40 170.2 193 62.2
Aa31LG3G7960 Aethionema arabicum HOM05D007220 ORTHO05D009058 7.4e-40 167.9 193 61.1
MELO3C006826.2 Cucumis melo HOM05D007220 ORTHO05D009058 1.6e-39 166.8 203 50.2
arahy.Tifrunner.gnm1.ann1.0IXC5E Arachis hypogaea HOM05D007220 ORTHO05D009058 3.7e-39 165.6 109 73.4
SGA_v2.0_scaffold2G01175 Striga asiatica HOM05D007220 ORTHO05D009058 3.7e-39 165.6 196 57.7
Carub.0008s1158 Capsella rubella HOM05D007220 ORTHO05D009058 1.1e-38 164.1 193 47.7
CARHR264320 Cardamine hirsuta HOM05D007220 ORTHO05D009058 3.1e-38 162.5 190 54.7
Ciclev10005924m.g Citrus clementina HOM05D007220 ORTHO05D009058 4.1e-38 162.2 204 57.4
vmacro09892 Vaccinium macrocarpon HOM05D007220 ORTHO05D009058 9.1e-38 161.0 204 52.9
Glyma.09G232600 Glycine max HOM05D007220 ORTHO05D009058 1.2e-37 160.6 110 70.9
SalBow4G2286 Salvia bowleyana HOM05D007220 ORTHO05D009058 1.5e-37 160.2 106 73.6
MSTRG.27183 Avicennia marina HOM05D007220 ORTHO05D009058 2.6e-37 159.5 189 57.1
CSS0026352 Camellia sinensis var. sinensis HOM05D007220 ORTHO05D009058 5.9e-37 158.3 103 77.7
CAN.G152.17 Capsicum annuum HOM05D007220 ORTHO05D009058 5.9e-37 158.3 109 71.6
Peaxi162Scf00241g00624 Petunia axillaris HOM05D007220 ORTHO05D009058 5.9e-37 158.3 110 71.8
Nn4g26358 Nelumbo nucifera HOM05D007220 ORTHO05D009058 2.2e-36 156.4 200 51.5
Nitab4.5_0000072g0560 Nicotiana tabacum HOM05D007220 ORTHO05D009058 2.2e-36 156.4 111 71.2
Solyc03g083570.3 Solanum lycopersicum HOM05D007220 ORTHO05D009058 5.0e-36 155.2 199 48.2
VMungo1127G0384 Vigna mungo HOM05D007220 ORTHO05D009058 6.5e-36 154.8 107 71.0
Sc19g0001910 Simmondsia chinensis HOM05D007220 ORTHO05D009058 1.1e-35 154.1 189 48.1
Sopen03g023380 Solanum pennellii HOM05D007220 ORTHO05D009058 1.1e-35 154.1 110 71.8
Nitab4.5_0001548g0050 Nicotiana tabacum HOM05D007220 ORTHO05D009058 1.4e-35 153.7 111 70.3
SGA_v2.0_scaffold486G52391 Striga asiatica HOM05D007220 ORTHO05D009058 4.2e-35 152.1 199 48.2
unitig_46.g18768 Utricularia gibba HOM05D007220 ORTHO05D009058 9.4e-35 151.0 164 52.4
Aqoxy7G00673 Aquilegia oxysepala HOM05D007220 ORTHO05D009058 1.2e-34 150.6 105 68.6
EL10Ac3g05813 Beta vulgaris HOM05D007220 ORTHO05D009058 2.1e-34 149.8 110 67.3
Migut.F00451 Erythranthe guttata HOM05D007220 ORTHO05D009058 2.1e-34 149.8 103 69.9
Phvul.011G004500 Phaseolus vulgaris HOM05D007220 ORTHO05D009058 4.6e-34 148.7 107 69.2
AUR62016183 Chenopodium quinoa HOM05D007220 ORTHO05D009058 1.0e-33 147.5 172 48.8
Lj8A39T34 Lonicera japonica HOM05D007220 ORTHO05D009058 1.0e-33 147.5 107 72.0
Rhsim09G0192800 Rhododendron simsii HOM05D007220 ORTHO05D009058 1.4e-33 147.1 206 47.6
Lj3g0016008 Lotus japonicus HOM05D007220 ORTHO05D009058 3.0e-33 146.0 112 65.2
HanXRQChr08g0223851 Helianthus annuus HOM05D007220 ORTHO05D009058 3.9e-33 145.6 191 46.6
Lsat_1_v5_gn_8_9340 Lactuca sativa HOM05D007220 ORTHO05D009058 3.3e-32 142.5 106 67.9
ECA233G2338 Erigeron canadensis HOM05D007220 ORTHO05D009058 7.4e-32 141.4 104 69.2
Ca_30916_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 4.8e-31 138.7 104 65.4
Medtr4g035825 Medicago truncatula HOM05D007220 ORTHO05D009058 6.9e-30 134.8 178 44.4
Psat7g150000 Pisum sativum HOM05D007220 ORTHO05D009058 6.9e-30 134.8 99 65.7
CDE09G0763 Ceratophyllum demersum HOM05D007220 ORTHO05D009058 2.0e-29 133.3 101 67.3
PSO782G3417 Papaver somniferum HOM05D007220 ORTHO05D009058 3.4e-29 132.5 105 60.0
arahy.Tifrunner.gnm1.ann1.83G6QR Arachis hypogaea HOM05D007220 ORTHO05D009058 4.5e-29 132.1 85 72.9
PSO478G4327 Papaver somniferum HOM05D007220 ORTHO05D009058 1.7e-28 130.2 105 58.1
Zm00001eb230760 Zea mays HOM05D007220 ORTHO05D009058 3.9e-25 119.0 106 61.3
HPP92_002073 Vanilla planifolia HOM05D007220 ORTHO05D009058 5.2e-25 118.6 100 57.0
SEGI_29714 Sequoiadendron giganteum HOM05D007220 ORTHO05D009058 2.6e-24 116.3 97 60.8
Potri.012G128000 Populus trichocarpa HOM05D007220 ORTHO05D009058 6.3e-23 111.7 199 48.7
ATR0730G016 Amborella trichopoda HOM05D007220 ORTHO05D009058 3.5e-21 105.9 101 58.4
TPR.G15117 Trifolium pratense HOM05D007220 ORTHO05D009058 5.9e-21 105.1 71 69.0
AUR62035102 Chenopodium quinoa HOM05D007220 ORTHO05D009058 1.3e-20 104.0 182 37.9
Prupe.2G280700 Prunus persica HOM05D007220 ORTHO05D009058 4.7e-18 95.5 151 44.4
MD07G1256600 Malus domestica HOM05D007220 ORTHO05D009058 5.2e-17 92.0 53 79.2
MBI12_g20320_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 1.8e-14 83.6 44 86.4
Pp3c26_11240 Physcomitrium patens HOM05D007220 ORTHO05D009058 4.1e-14 82.4 99 46.5
TAR629G2293 Trochodendron aralioides HOM05D007220 ORTHO05D009058 5.3e-14 82.0 140 39.3
AagrBONN_evm.TU.Sc2ySwM_228.5821 Anthoceros agrestis HOM05D007220 ORTHO05D009058 1.2e-13 80.9 99 43.4
Mapoly0002s0242 Marchantia polymorpha HOM05D007220 ORTHO05D009058 2.0e-13 80.1 79 48.1
PGSC0003DMG400023001 Solanum tuberosum HOM05D007220 ORTHO05D009058 1.7e-12 77.0 61 68.9
DCAR_009422 Daucus carota HOM05D007220 ORTHO05D009058 5.0e-12 75.5 152 38.2
DCAR_009423 Daucus carota HOM05D007220 ORTHO05D009058 5.0e-12 75.5 152 38.2
Sed0003033 Sechium edule HOM05D007220 ORTHO05D009058 7.2e-11 71.6 159 38.4
HanXRQChr04g0107801 Helianthus annuus HOM05D000901 ORTHO05D001160 4.7e-10 68.9 92 42.4
Ca_20051_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 5.2e-09 65.5 63 52.4
Thhalv10015015m.g Eutrema salsugineum HOM05D007220 ORTHO05D009058 5.2e-09 65.5 129 46.5
MBI12_g14970_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 8.8e-09 64.7 60 55.0
MBI12_g25331_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 9.8e-08 61.2 62 51.6


User provided reference genes

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