Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc3.235 Carica papaya HOM05D001099 ORTHO05D000958 2.7e-68 261.9 138 100.0
Prupe.1G237800 Prunus persica HOM05D001099 ORTHO05D000958 1.1e-21 107.1 124 54.0
Nn3g16578 Nelumbo nucifera HOM05D001099 ORTHO05D000958 2.5e-21 105.9 71 74.6
Dinv14779 Davidia involucrata HOM05D001099 ORTHO05D000958 3.6e-20 102.1 123 51.2
ClCG05G026230 Citrullus lanatus HOM05D001099 ORTHO05D000958 4.7e-20 101.7 70 70.0
MELO3C011908.2 Cucumis melo HOM05D001099 ORTHO05D000958 8.0e-20 100.9 65 73.8
PGR119G0832 Punica granatum HOM05D001099 ORTHO05D000958 2.3e-19 99.4 93 55.9
Haze_12316 Corylus avellana HOM05D000960 ORTHO05D000958 3.1e-19 99.0 70 72.9
Manes.13G013400 Manihot esculenta HOM05D001099 ORTHO05D000958 4.0e-19 98.6 102 57.8
CSS0029931 Camellia sinensis var. sinensis HOM05D001099 ORTHO05D000958 3.4e-18 95.5 72 69.4
CSS0030519 Camellia sinensis var. sinensis HOM05D001099 ORTHO05D000958 3.4e-18 95.5 72 69.4
CANSAT01G0592 Cannabis sativa HOM05D001099 ORTHO05D000958 4.4e-18 95.1 93 53.8
Ciclev10032587m.g Citrus clementina HOM05D001099 ORTHO05D000958 4.4e-18 95.1 72 63.9
Sabra10G0017200 Salix brachista HOM05D001099 ORTHO05D000958 4.4e-18 95.1 123 51.2
COL.COLO4_23563 Corchorus olitorius HOM05D000960 ORTHO05D000958 7.5e-18 94.4 70 70.0
Cc11_g16360 Coffea canephora HOM05D001099 ORTHO05D000958 9.8e-18 94.0 88 60.2
FvH4_4g24850 Fragaria vesca HOM05D001099 ORTHO05D000958 9.8e-18 94.0 83 61.4
FAN12G2577 Fragaria x ananassa HOM05D001099 ORTHO05D000958 9.8e-18 94.0 83 61.4
Potri.010G053400 Populus trichocarpa HOM05D001099 ORTHO05D000958 9.8e-18 94.0 122 50.0
Sed0005232 Sechium edule HOM05D001099 ORTHO05D000958 9.8e-18 94.0 65 66.2
FAN17G1345 Fragaria x ananassa HOM05D001099 ORTHO05D000958 1.3e-17 93.6 81 61.7
RcHm_v2.0_Chr4g0431921 Rosa chinensis HOM05D001099 ORTHO05D000958 1.3e-17 93.6 81 60.5
FAN07G1920 Fragaria x ananassa HOM05D001099 ORTHO05D000958 2.2e-17 92.8 81 61.7
CiPaw.05G174800 Carya illinoinensis HOM05D001099 ORTHO05D000958 2.9e-17 92.4 81 60.5
Oeu020323.1 Olea europaea HOM05D001099 ORTHO05D000958 2.9e-17 92.4 98 54.1
MD13G1108500 Malus domestica HOM05D001099 ORTHO05D000958 3.7e-17 92.0 92 56.5
Cfa009285 Carpinus fangiana HOM05D001099 ORTHO05D000958 4.9e-17 91.7 71 70.4
Eucgr.H04692 Eucalyptus grandis HOM05D001099 ORTHO05D000958 6.4e-17 91.3 129 45.7
FAN22G1154 Fragaria x ananassa HOM05D001099 ORTHO05D000958 6.4e-17 91.3 81 60.5
Manes.12G017300 Manihot esculenta HOM05D001099 ORTHO05D000958 8.3e-17 90.9 67 70.1
Gohir.A04G137700 Gossypium hirsutum HOM05D001099 ORTHO05D000958 1.4e-16 90.1 66 68.2
Gohir.D04G180900 Gossypium hirsutum HOM05D001099 ORTHO05D000958 1.4e-16 90.1 66 68.2
Gorai.012G174100 Gossypium raimondii HOM05D001099 ORTHO05D000958 1.4e-16 90.1 66 68.2
Peaxi162Scf00797g00012 Petunia axillaris HOM05D001099 ORTHO05D000958 1.4e-16 90.1 99 54.5
MD16G1108600 Malus domestica HOM05D001099 ORTHO05D000958 3.2e-16 89.0 93 53.8
Duzib268G1734 Durio zibethinus HOM05D001099 ORTHO05D000958 5.4e-16 88.2 70 65.7
Sc03g0006910 Simmondsia chinensis HOM05D001099 ORTHO05D000958 5.4e-16 88.2 70 57.1
Thecc.02G270300 Theobroma cacao HOM05D001099 ORTHO05D000958 5.4e-16 88.2 70 68.6
TAR374G1322 Trochodendron aralioides HOM05D001099 ORTHO05D000958 7.0e-16 87.8 70 65.7
GSVIVG01010308001 Vitis vinifera HOM05D001099 ORTHO05D000958 7.0e-16 87.8 68 70.6
Sc03g0006990 Simmondsia chinensis HOM05D001099 ORTHO05D000958 9.2e-16 87.4 70 57.1
Rhsim12G0036900 Rhododendron simsii HOM05D001099 ORTHO05D000958 1.6e-15 86.7 96 55.2
Aqoxy5G03699 Aquilegia oxysepala HOM05D001099 ORTHO05D000958 2.7e-15 85.9 96 46.9
VMungo1383G2261 Vigna mungo HOM05D001099 ORTHO05D000958 2.7e-15 85.9 68 58.8
Actinidia12873 Actinidia chinensis HOM05D001099 ORTHO05D000958 7.8e-15 84.3 126 45.2
Hma1.2p1_0079F.1_g041510 Hydrangea macrophylla HOM05D001099 ORTHO05D000958 7.8e-15 84.3 135 43.0
SalBow8G3255 Salvia bowleyana HOM05D001099 ORTHO05D000958 1.3e-14 83.6 100 50.0
Aqoxy5G03580 Aquilegia oxysepala HOM05D001099 ORTHO05D000958 2.3e-14 82.8 74 55.4
Medtr3g086050 Medicago truncatula HOM05D001099 ORTHO05D000958 3.0e-14 82.4 72 61.1
vmacro01096 Vaccinium macrocarpon HOM05D001099 ORTHO05D000958 3.9e-14 82.0 70 61.4
CDE07G1226 Ceratophyllum demersum HOM05D001099 ORTHO05D000958 5.0e-14 81.6 71 57.7
Ciclev10016547m.g Citrus clementina HOM05D001099 ORTHO05D000958 1.5e-13 80.1 95 50.5
DCAR_024078 Daucus carota HOM05D001099 ORTHO05D000958 1.5e-13 80.1 76 55.3
TWI75G1299 Tripterygium wilfordii HOM05D001099 ORTHO05D000958 1.5e-13 80.1 72 63.9
HanXRQChr08g0207301 Helianthus annuus HOM05D001099 ORTHO05D000958 1.9e-13 79.7 99 47.5
Hund06055 Selenicereus undatus HOM05D001099 ORTHO05D000958 1.9e-13 79.7 71 56.3
DCAR_026487 Daucus carota HOM05D001099 ORTHO05D000958 3.3e-13 79.0 88 51.1
Glyma.11G246600 Glycine max HOM05D001099 ORTHO05D000958 5.6e-13 78.2 82 51.2
Lalb_Chr08g0230771 Lupinus albus HOM05D001099 ORTHO05D000958 7.3e-13 77.8 66 60.6
PGSC0003DMG400011977 Solanum tuberosum HOM05D001099 ORTHO05D000958 7.3e-13 77.8 81 48.1
Phvul.001G258200 Phaseolus vulgaris HOM05D001099 ORTHO05D000958 1.2e-12 77.0 68 51.5
Sopen05g009370 Solanum pennellii HOM05D001099 ORTHO05D000958 1.2e-12 77.0 63 57.1
Lj6g0024762 Lotus japonicus HOM05D001099 ORTHO05D000958 1.6e-12 76.6 121 45.5
HPP92_011662 Vanilla planifolia HOM05D001099 ORTHO05D000958 2.1e-12 76.3 83 49.4
Ca_16495_v3 Cicer arietinum L. HOM05D001099 ORTHO05D000958 2.8e-12 75.9 71 57.7
Solyc05g014280.4 Solanum lycopersicum HOM05D001099 ORTHO05D000958 4.7e-12 75.1 97 42.3
Psat5g093880 Pisum sativum HOM05D001099 ORTHO05D000958 6.2e-12 74.7 82 57.3
Migut.E00230 Erythranthe guttata HOM05D001099 ORTHO05D000958 8.1e-12 74.3 92 46.7
TWI36G0065 Tripterygium wilfordii HOM05D001099 ORTHO05D000958 1.1e-11 73.9 65 64.6
Lsat_1_v5_gn_8_151001 Lactuca sativa HOM05D001099 ORTHO05D000958 1.4e-11 73.6 91 47.3
SGA_v2.0_scaffold87G27117 Striga asiatica HOM05D001099 ORTHO05D000958 1.8e-11 73.2 71 52.1
ATR0824G132 Amborella trichopoda HOM05D001099 ORTHO05D000958 8.9e-11 70.9 68 54.4
ECA233G4167 Erigeron canadensis HOM05D001099 ORTHO05D000958 1.5e-10 70.1 96 41.7
HPP92_013547 Vanilla planifolia HOM05D001099 ORTHO05D000958 1.5e-10 70.1 92 48.9
HanXRQChr12g0372131 Helianthus annuus HOM05D001099 ORTHO05D000958 2.0e-10 69.7 65 58.5
TPR.G33393 Trifolium pratense HOM05D001099 ORTHO05D000958 2.6e-10 69.3 76 48.7
TAR622G1135 Trochodendron aralioides HOM05D001099 ORTHO05D000958 1.3e-09 67.0 45 73.3
Nitab4.5_0001318g0050 Nicotiana tabacum HOM05D001099 ORTHO05D000958 2.9e-09 65.9 46 65.2
Ah.02g130500 Amaranthus hybridus HOM05D001304 ORTHO05D008890 4.9e-09 65.1 72 48.6
CsaV3_5G030610 Cucumis sativus L. HOM05D001099 ORTHO05D000958 9.2e-08 60.8 31 83.9


User provided reference genes

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