Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc3.198 Carica papaya HOM05D007277 ORTHO05D006336 2.9e-94 348.6 183 100.0
Cpa.g.sc3.210 Carica papaya HOM05D007277 ORTHO05D006336 1.7e-89 332.8 183 96.2
Cpa.g.sc3.199 Carica papaya HOM05D007277 ORTHO05D006336 2.6e-66 255.8 183 76.5
Cpa.g.sc3.209 Carica papaya HOM05D007277 ORTHO05D006336 3.1e-59 232.3 167 76.0
QL07p042995 Quercus lobata HOM05D007277 ORTHO05D006336 6.2e-20 101.7 106 53.8
Thecc.03G110900 Theobroma cacao HOM05D007277 ORTHO05D006336 8.2e-20 101.3 145 44.1
COL.COLO4_28831 Corchorus olitorius HOM05D007277 ORTHO05D006336 4.5e-18 95.5 146 44.5
QL07p042879 Quercus lobata HOM05D007277 ORTHO05D006336 7.6e-18 94.7 104 50.0
QL07p042903 Quercus lobata HOM05D007277 ORTHO05D006336 7.6e-18 94.7 110 52.7
Gohir.A07G058000 Gossypium hirsutum HOM05D007277 ORTHO05D006336 2.2e-17 93.2 156 42.9
QL07p042928 Quercus lobata HOM05D007277 ORTHO05D006336 2.9e-17 92.8 102 53.9
Gohir.D07G062800 Gossypium hirsutum HOM05D007277 ORTHO05D006336 1.4e-16 90.5 156 41.7
QL02p080510 Quercus lobata HOM05D007277 ORTHO05D006336 7.1e-16 88.2 178 38.8
Cfa002614 Carpinus fangiana HOM05D007277 ORTHO05D006336 1.2e-15 87.4 102 51.0
Ciclev10029817m.g Citrus clementina HOM05D007277 ORTHO05D006336 2.7e-15 86.3 121 43.0
Haze_27687 Corylus avellana HOM05D007277 ORTHO05D006336 4.6e-15 85.5 130 42.3
Haze_27688 Corylus avellana HOM05D007277 ORTHO05D006336 4.6e-15 85.5 130 42.3
Cfa002615 Carpinus fangiana HOM05D007277 ORTHO05D006336 1.0e-14 84.3 105 49.5
Ciclev10024167m.g Citrus clementina HOM05D007277 ORTHO05D006336 1.0e-14 84.3 118 43.2
Thecc.03G111200 Theobroma cacao HOM05D007277 ORTHO05D006336 1.0e-14 84.3 125 42.4
FvH4_5g13170 Fragaria vesca HOM05D007277 ORTHO05D006336 1.8e-14 83.6 126 40.5
Gorai.001G066300 Gossypium raimondii HOM05D007277 ORTHO05D006336 2.3e-14 83.2 158 41.1
Ciclev10023402m.g Citrus clementina HOM05D007277 ORTHO05D006336 3.0e-14 82.8 167 35.9
FAN18G2501 Fragaria x ananassa HOM05D007277 ORTHO05D006336 3.0e-14 82.8 126 41.3
QL09p028728 Quercus lobata HOM05D007277 ORTHO05D006336 5.1e-14 82.0 178 37.6
FAN18G2870 Fragaria x ananassa HOM05D000423 ORTHO05D000284 6.7e-14 81.6 116 43.1
Cfa021203 Carpinus fangiana HOM05D007277 ORTHO05D006336 8.7e-14 81.3 107 46.7
QL07p042983 Quercus lobata HOM05D007277 ORTHO05D006336 1.9e-13 80.1 101 48.5
FvH4_5g13140 Fragaria vesca HOM05D007277 ORTHO05D006336 2.5e-13 79.7 126 39.7
Ciclev10023596m.g Citrus clementina HOM05D010635 ORTHO05D006336 3.3e-13 79.3 123 39.0
Haze_24863 Corylus avellana HOM05D000010 ORTHO05D006336 3.3e-13 79.3 106 45.3
FAN18G3246 Fragaria x ananassa HOM05D007277 ORTHO05D006336 3.3e-13 79.3 126 39.7
FvH4_5g13130 Fragaria vesca HOM05D007277 ORTHO05D006336 5.7e-13 78.6 134 38.8
FAN08G1790 Fragaria x ananassa HOM05D007277 ORTHO05D006336 5.7e-13 78.6 123 41.5
FAN18G0686 Fragaria x ananassa HOM05D007277 ORTHO05D006336 5.7e-13 78.6 134 38.8
Haze_24866 Corylus avellana HOM05D007277 ORTHO05D006336 9.7e-13 77.8 97 45.4
FAN08G1781 Fragaria x ananassa HOM05D007277 ORTHO05D006336 9.7e-13 77.8 109 43.1
Ciclev10024327m.g Citrus clementina HOM05D007277 ORTHO05D006336 1.3e-12 77.4 101 43.6
QL02p080387 Quercus lobata HOM05D007277 ORTHO05D006336 1.6e-12 77.0 166 36.7
QL10p051898 Quercus lobata HOM05D007277 ORTHO05D006336 1.6e-12 77.0 151 36.4
Haze_24862 Corylus avellana HOM05D007277 ORTHO05D006336 2.2e-12 76.6 103 46.6
FvH4_5g13230 Fragaria vesca HOM05D007277 ORTHO05D006336 2.8e-12 76.3 126 38.9
FvH4_5g13221 Fragaria vesca HOM05D007277 ORTHO05D006336 4.8e-12 75.5 104 42.3
QL10p012835 Quercus lobata HOM05D007277 ORTHO05D006336 4.8e-12 75.5 122 39.3
PGSC0003DMG400024676 Solanum tuberosum HOM05D007277 ORTHO05D006336 4.8e-12 75.5 176 35.2
Atru.chr9.2085 Acer truncatum HOM05D007277 ORTHO05D006336 6.3e-12 75.1 121 40.5
QL07p042874 Quercus lobata HOM05D007277 ORTHO05D006336 6.3e-12 75.1 102 44.1
Solyc03g114650.3 Solanum lycopersicum HOM05D007277 ORTHO05D006336 6.3e-12 75.1 111 42.3
QL07p042908 Quercus lobata HOM05D007277 ORTHO05D006336 8.2e-12 74.7 103 45.6
DCAR_010189 Daucus carota HOM05D007277 ORTHO05D006336 1.1e-11 74.3 109 44.0
Sopen03g033720 Solanum pennellii HOM05D007277 ORTHO05D006336 1.8e-11 73.6 115 40.9
FAN13G2869 Fragaria x ananassa HOM05D007277 ORTHO05D006336 3.1e-11 72.8 106 39.6
Atru.chr4.1305 Acer truncatum HOM05D010298 ORTHO05D006336 5.3e-11 72.0 103 43.7
CSS0000915 Camellia sinensis var. sinensis HOM05D007277 ORTHO05D006336 1.5e-10 70.5 101 42.6
RcHm_v2.0_Chr7g0241491 Rosa chinensis HOM05D007277 ORTHO05D006336 1.5e-10 70.5 120 39.2
Prupe.6G011800 Prunus persica HOM05D007277 ORTHO05D006336 2.0e-10 70.1 140 39.3
MD03G1009100 Malus domestica HOM05D007277 ORTHO05D006336 2.6e-10 69.7 134 38.1
PGSC0003DMG400024518 Solanum tuberosum HOM05D007277 ORTHO05D006336 2.6e-10 69.7 181 32.6
Ciclev10023444m.g Citrus clementina HOM05D007277 ORTHO05D006336 5.9e-10 68.6 167 32.3
FAN08G3205 Fragaria x ananassa HOM05D007277 ORTHO05D006336 5.9e-10 68.6 86 46.5
RcHm_v2.0_Chr7g0240781 Rosa chinensis HOM05D007277 ORTHO05D006336 1.0e-09 67.8 123 37.4
Actinidia24268 Actinidia chinensis HOM05D007277 ORTHO05D006336 1.3e-09 67.4 95 37.9
Manes.05G115300 Manihot esculenta HOM05D007277 ORTHO05D006336 1.3e-09 67.4 112 42.0
Prupe.1G109400 Prunus persica HOM05D007277 ORTHO05D006336 2.2e-09 66.6 106 43.4
Atru.chr4.1303 Acer truncatum HOM05D010298 ORTHO05D012539 2.9e-09 66.2 105 41.0
Rhsim12G0165400 Rhododendron simsii HOM05D007277 ORTHO05D006336 2.9e-09 66.2 101 43.6
MD14G1141800 Malus domestica HOM05D007277 ORTHO05D006336 3.8e-09 65.9 99 41.4
FvH4_5g13190 Fragaria vesca HOM05D007277 ORTHO05D013598 5.0e-09 65.5 98 42.9
Actinidia22592 Actinidia chinensis HOM05D007277 ORTHO05D006336 6.5e-09 65.1 148 33.1
Atru.chr12.1464 Acer truncatum HOM05D007277 ORTHO05D006336 8.5e-09 64.7 144 31.9
Cfa002609 Carpinus fangiana HOM05D007277 ORTHO05D006336 8.5e-09 64.7 116 38.8
Actinidia10434 Actinidia chinensis HOM05D007277 ORTHO05D006336 1.9e-08 63.5 94 47.9
MD03G1010100 Malus domestica HOM05D007277 ORTHO05D006336 1.9e-08 63.5 137 37.2
MD11G1013400 Malus domestica HOM05D007277 ORTHO05D006336 2.5e-08 63.2 116 36.2
QL11p034196 Quercus lobata HOM05D007277 ORTHO05D006336 2.5e-08 63.2 93 45.2
Sabra03G0023900 Salix brachista HOM05D010635 ORTHO05D006336 5.5e-08 62.0 173 28.9
Prupe.6G011200 Prunus persica HOM05D007277 ORTHO05D006336 9.4e-08 61.2 113 35.4
Actinidia24271 Actinidia chinensis HOM05D007277 ORTHO05D006336 1.2e-07 60.8 96 34.4
FvH4_5g13220 Fragaria vesca HOM05D007277 ORTHO05D006336 1.6e-07 60.5 81 48.1
MD03G1011400 Malus domestica HOM05D007277 ORTHO05D006336 1.6e-07 60.5 103 35.9
Potri.007G133200 Populus trichocarpa HOM05D010635 ORTHO05D006336 2.1e-07 60.1 102 34.3
MD11G1013900 Malus domestica HOM05D007277 ORTHO05D006336 2.7e-07 59.7 107 33.6
Prupe.6G011700 Prunus persica HOM05D007277 ORTHO05D006336 3.6e-07 59.3 106 40.6
TAR636G3203 Trochodendron aralioides HOM05D012741 ORTHO05D006336 7.9e-07 58.2 168 31.0
Cfa002610 Carpinus fangiana HOM05D007277 ORTHO05D006336 1.0e-06 57.8 106 38.7
TAR636G2604 Trochodendron aralioides HOM05D012741 ORTHO05D006336 1.0e-06 57.8 141 33.3
Sabra07G0120000 Salix brachista HOM05D010635 ORTHO05D006336 1.4e-06 57.4 102 34.3
Sabra17G0002100 Salix brachista HOM05D010635 ORTHO05D006336 1.4e-06 57.4 106 36.8
Potri.017G019000 Populus trichocarpa HOM05D010635 ORTHO05D006336 2.3e-06 56.6 106 37.7
Sabra17G0014600 Salix brachista HOM05D010635 ORTHO05D006336 2.3e-06 56.6 106 36.8
TAR636G1074 Trochodendron aralioides HOM05D012741 ORTHO05D006336 3.0e-06 56.2 102 36.3


User provided reference genes

Program Settings