Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc3.144 Carica papaya HOM05D003640 ORTHO05D004439 0.0e+00 1267.7 680 100.0
QL09p007408 Quercus lobata HOM05D003640 ORTHO05D004439 4.4e-220 768.5 681 64.9
QL93p0214_0013 Quercus lobata HOM05D003640 ORTHO05D004439 9.8e-220 767.3 681 64.8
Dinv35374 Davidia involucrata HOM05D003640 ORTHO05D004439 5.0e-216 755.0 688 62.5
Duzib084G0116 Durio zibethinus HOM05D003640 ORTHO05D004439 1.2e-212 743.8 673 63.7
CiPaw.05G202900 Carya illinoinensis HOM05D003640 ORTHO05D004439 2.0e-204 716.5 689 60.4
Thecc.03G206700 Theobroma cacao HOM05D003640 ORTHO05D004439 1.7e-203 713.4 863 52.8
Haze_00277 Corylus avellana HOM05D003640 ORTHO05D004439 1.4e-202 710.3 689 61.8
Dinv29226 Davidia involucrata HOM05D003640 ORTHO05D004439 9.2e-202 707.6 734 56.8
TWI39G1295 Tripterygium wilfordii HOM05D003640 ORTHO05D004439 6.6e-200 701.4 673 61.1
Prupe.2G317300 Prunus persica HOM05D003640 ORTHO05D004439 4.3e-199 698.7 683 60.9
Atru.chr12.2367 Acer truncatum HOM05D003640 ORTHO05D004439 3.6e-198 695.7 665 61.5
CSS0045837 Camellia sinensis var. sinensis HOM05D003640 ORTHO05D004439 4.0e-197 692.2 687 60.1
Potri.012G023200 Populus trichocarpa HOM05D003640 ORTHO05D004439 6.9e-197 691.4 664 60.1
GSVIVG01038625001 Vitis vinifera HOM05D003640 ORTHO05D004439 1.1e-194 684.1 618 64.4
CiPaw.06G042300 Carya illinoinensis HOM05D003640 ORTHO05D004439 6.0e-193 678.3 687 58.4
CSS0041088 Camellia sinensis var. sinensis HOM05D003640 ORTHO05D004439 5.1e-192 675.2 680 59.9
Manes.01G041300 Manihot esculenta HOM05D003640 ORTHO05D004439 6.6e-192 674.9 664 61.0
Potri.015G006700 Populus trichocarpa HOM05D003640 ORTHO05D004439 8.7e-192 674.5 665 58.8
MD01G1227300 Malus domestica HOM05D003640 ORTHO05D004439 5.3e-189 665.2 680 58.5
Sabra12G0010700 Salix brachista HOM05D003640 ORTHO05D004439 2.9e-187 659.4 689 57.0
Actinidia28276 Actinidia chinensis HOM05D003640 ORTHO05D004439 8.4e-187 657.9 688 57.0
arahy.Tifrunner.gnm1.ann1.1EDB5Y Arachis hypogaea HOM05D003640 ORTHO05D004439 1.1e-186 657.5 685 57.2
MD07G1297600 Malus domestica HOM05D003640 ORTHO05D004439 6.0e-185 651.7 681 59.2
RcHm_v2.0_Chr1g0382521 Rosa chinensis HOM05D003640 ORTHO05D004439 7.9e-185 651.4 668 58.5
arahy.Tifrunner.gnm1.ann1.BT3HV7 Arachis hypogaea HOM05D003640 ORTHO05D004439 1.8e-184 650.2 685 56.6
Rhsim03G0214000 Rhododendron simsii HOM05D003640 ORTHO05D004439 5.1e-184 648.7 687 57.6
Actinidia34257 Actinidia chinensis HOM05D003640 ORTHO05D004439 1.6e-182 643.7 689 57.0
Gorai.004G124100 Gossypium raimondii HOM05D003640 ORTHO05D004439 2.8e-182 642.9 860 49.5
Gohir.D08G115200 Gossypium hirsutum HOM05D003640 ORTHO05D004439 2.6e-180 636.3 859 49.2
Sabra15G0004700 Salix brachista HOM05D003640 ORTHO05D004439 9.9e-180 634.4 663 57.3
Gohir.A08G103800 Gossypium hirsutum HOM05D003640 ORTHO05D004439 8.4e-179 631.3 669 57.8
Actinidia08687 Actinidia chinensis HOM05D003640 ORTHO05D004439 1.6e-177 627.1 611 60.1
FvH4_7g32660 Fragaria vesca HOM05D003640 ORTHO05D004439 4.6e-177 625.5 671 56.2
vmacro06427 Vaccinium macrocarpon HOM05D003640 ORTHO05D004439 6.0e-177 625.2 730 53.7
FAN10G0822 Fragaria x ananassa HOM05D003640 ORTHO05D004439 1.8e-176 623.6 672 56.5
FAN01G0295 Fragaria x ananassa HOM05D003640 ORTHO05D004439 1.1e-175 620.9 671 55.9
Duzib068G1167 Durio zibethinus HOM05D003640 ORTHO05D004439 2.5e-175 619.8 673 56.9
Glyma.06G134300 Glycine max HOM05D003640 ORTHO05D004439 6.2e-174 615.1 681 55.1
FAN10G2795 Fragaria x ananassa HOM05D003640 ORTHO05D004439 1.8e-173 613.6 671 55.3
ClCG01G000140 Citrullus lanatus HOM05D003640 ORTHO05D004439 6.9e-173 611.7 688 54.5
Lj1g0027227 Lotus japonicus HOM05D003640 ORTHO05D004439 9.0e-173 611.3 680 54.1
MELO3C005925.2 Cucumis melo HOM05D003640 ORTHO05D004439 2.6e-172 609.8 686 54.8
TAR375G0550 Trochodendron aralioides HOM05D003640 ORTHO05D004439 5.8e-172 608.6 684 55.1
CsaV3_5G000020 Cucumis sativus L. HOM05D003640 ORTHO05D004439 2.9e-171 606.3 686 54.8
Gohir.D09G181300 Gossypium hirsutum HOM05D003640 ORTHO05D004439 4.2e-170 602.4 662 55.6
Phvul.009G050200 Phaseolus vulgaris HOM05D003640 ORTHO05D004439 1.2e-169 600.9 680 54.6
Glyma.04G230800 Glycine max HOM05D003640 ORTHO05D004439 7.9e-169 598.2 682 54.5
Nn1g00405 Nelumbo nucifera HOM05D003640 ORTHO05D004439 1.3e-168 597.4 695 54.1
VMungo1309G3003 Vigna mungo HOM05D003640 ORTHO05D004439 9.7e-167 591.3 675 54.1
Duzib205G1657 Durio zibethinus HOM05D003640 ORTHO05D004439 1.3e-166 590.9 673 55.9
FAN03G1455 Fragaria x ananassa HOM05D003640 ORTHO05D004439 3.7e-166 589.3 672 54.8
Gorai.008G265800 Gossypium raimondii HOM05D003640 ORTHO05D004439 3.7e-166 589.3 670 54.9
Gohir.D12G247700 Gossypium hirsutum HOM05D003640 ORTHO05D004439 4.8e-166 589.0 670 54.8
Sed0000635 Sechium edule HOM05D003640 ORTHO05D004439 1.8e-165 587.0 685 52.8
COL.COLO4_14351 Corchorus olitorius HOM05D003640 ORTHO05D004439 2.4e-165 586.6 824 48.5
Cc02_g00960 Coffea canephora HOM05D003640 ORTHO05D004439 3.1e-165 586.3 690 53.0
Gorai.006G203300 Gossypium raimondii HOM05D003640 ORTHO05D004439 4.1e-165 585.9 662 54.2
Sed0021595 Sechium edule HOM05D003640 ORTHO05D004439 3.4e-164 582.8 685 52.7
Ca_16756_v3 Cicer arietinum L. HOM05D003640 ORTHO05D004439 7.6e-164 581.6 670 53.0
Lalb_Chr08g0239801 Lupinus albus HOM05D003640 ORTHO05D004439 1.0e-163 581.3 688 53.3
Psat0s2807g0080 Pisum sativum HOM05D003640 ORTHO05D004439 1.0e-163 581.3 623 55.7
Nn3g18833 Nelumbo nucifera HOM05D003640 ORTHO05D004439 1.7e-163 580.5 643 55.5
TAR629G0154 Trochodendron aralioides HOM05D003640 ORTHO05D004439 1.7e-163 580.5 683 53.3
TAR636G3562 Trochodendron aralioides HOM05D003640 ORTHO05D004439 2.2e-163 580.1 679 53.8
Lalb_Chr23g0271841 Lupinus albus HOM05D003640 ORTHO05D004439 8.5e-163 578.2 658 55.8
Gohir.A12G247000 Gossypium hirsutum HOM05D003640 ORTHO05D004439 1.1e-162 577.8 670 54.3
Lalb_Chr11g0067271 Lupinus albus HOM05D003640 ORTHO05D004439 9.3e-162 574.7 684 53.4
Medtr3g092250 Medicago truncatula HOM05D003640 ORTHO05D004439 1.8e-160 570.5 665 52.9
CANSAT21G0645 Cannabis sativa HOM05D003640 ORTHO05D004439 2.2e-155 553.5 680 52.1
Hund09700 Selenicereus undatus HOM05D003640 ORTHO05D004439 1.8e-152 543.9 624 52.4
Hma1.2p1_0094F.1_g047240 Hydrangea macrophylla HOM05D003640 ORTHO05D004439 2.0e-151 540.4 713 49.1
Gohir.A09G186400 Gossypium hirsutum HOM05D003640 ORTHO05D004439 6.3e-150 535.4 660 51.7
Oeu037965.1 Olea europaea HOM05D003640 ORTHO05D004439 5.3e-149 532.3 684 50.1
AUR62006022 Chenopodium quinoa HOM05D003640 ORTHO05D004439 1.2e-145 521.2 621 51.2
Oeu055180.3 Olea europaea HOM05D003640 ORTHO05D004439 2.1e-145 520.4 712 47.6
Sopen03g022220 Solanum pennellii HOM05D003640 ORTHO05D004439 2.1e-145 520.4 682 49.6
TWI23G0563 Tripterygium wilfordii HOM05D003640 ORTHO05D004439 2.1e-145 520.4 468 63.5
EL10Ac3g05201 Beta vulgaris HOM05D003640 ORTHO05D004439 1.5e-143 514.2 681 49.3
Solyc03g082490.4 Solanum lycopersicum HOM05D003640 ORTHO05D004439 4.8e-142 509.2 682 48.8
THA.LOC104825162 Tarenaya hassleriana HOM05D003640 ORTHO05D004439 7.0e-141 505.4 655 51.8
Aqoxy7G00014 Aquilegia oxysepala HOM05D003640 ORTHO05D004439 1.2e-140 504.6 683 49.2
Sc19g0000670 Simmondsia chinensis HOM05D003640 ORTHO05D004439 2.1e-137 493.8 661 50.2
PGR142G2086 Punica granatum HOM05D003640 ORTHO05D004439 4.0e-136 489.6 673 49.9
MBI12_g23004_MAGBIO Magnolia biondii HOM05D003640 ORTHO05D004439 1.7e-134 484.2 709 45.8
AUR62035604 Chenopodium quinoa HOM05D003640 ORTHO05D004439 1.1e-133 481.5 621 48.8
PSO135G0929 Papaver somniferum HOM05D003640 ORTHO05D004439 7.0e-133 478.8 674 49.1
Hund21040 Selenicereus undatus HOM05D003640 ORTHO05D004439 1.2e-132 478.0 631 47.7
DCAR_008967 Daucus carota HOM05D003640 ORTHO05D004439 2.9e-131 473.4 656 48.2
PSO384G0385 Papaver somniferum HOM05D003640 ORTHO05D004439 3.2e-130 469.9 674 47.9
MSTRG.26989 Avicennia marina HOM05D003640 ORTHO05D004439 4.2e-130 469.5 675 46.7
CAN.G358.147 Capsicum annuum HOM05D003640 ORTHO05D004439 4.2e-130 469.5 527 54.1
Migut.F00997 Erythranthe guttata HOM05D003640 ORTHO05D004439 2.1e-129 467.2 675 46.7
DCAR_020359 Daucus carota HOM05D003640 ORTHO05D004439 5.2e-128 462.6 672 47.2
ECA232G0587 Erigeron canadensis HOM05D003640 ORTHO05D004439 5.2e-128 462.6 621 49.1
MSTRG.8618 Avicennia marina HOM05D003640 ORTHO05D004439 1.5e-127 461.1 685 46.6
Aa31sc289G20 Aethionema arabicum HOM05D003640 ORTHO05D004439 2.6e-127 460.3 609 48.8
Nitab4.5_0001993g0040 Nicotiana tabacum HOM05D003640 ORTHO05D004439 6.3e-126 455.7 671 45.9
Oeu061023.1 Olea europaea HOM05D003640 ORTHO05D004439 6.6e-123 445.7 625 49.0
SGA_v2.0_scaffold565G52945 Striga asiatica HOM05D003640 ORTHO05D004439 6.6e-123 445.7 657 45.7
Lj1C1026T8 Lonicera japonica HOM05D003640 ORTHO05D004439 5.5e-122 442.6 794 42.4
SalBow2G2490 Salvia bowleyana HOM05D003640 ORTHO05D004439 1.1e-117 428.3 645 46.8
SalBow6G0961 Salvia bowleyana HOM05D003640 ORTHO05D004439 1.4e-117 427.9 658 44.8
Ah.07g204850 Amaranthus hybridus HOM05D003640 ORTHO05D004439 5.9e-116 422.5 679 44.9
HanXRQChr05g0139301 Helianthus annuus HOM05D003640 ORTHO05D004439 6.6e-115 419.1 643 44.3
HanXRQChr15g0485391 Helianthus annuus HOM05D003640 ORTHO05D004439 2.8e-113 413.7 661 44.0
MSTRG.8540 Avicennia marina HOM05D003640 ORTHO05D004439 6.8e-112 409.1 662 44.3
CARHR266770 Cardamine hirsuta HOM05D003640 ORTHO05D004439 1.5e-111 407.9 549 50.6
SGA_v2.0_scaffold136G35055 Striga asiatica HOM05D003640 ORTHO05D004439 3.2e-109 400.2 603 45.1
Lsat_1_v5_gn_9_50221 Lactuca sativa HOM05D003640 ORTHO05D004439 2.7e-108 397.1 558 47.3
CARHR266800 Cardamine hirsuta HOM05D003640 ORTHO05D004439 3.9e-107 393.3 552 49.3
Lsat_1_v5_gn_9_50181 Lactuca sativa HOM05D003640 ORTHO05D004439 8.6e-107 392.1 558 46.6
RcHm_v2.0_Chr1g0382561 Rosa chinensis HOM05D003640 ORTHO05D004439 1.1e-104 385.2 490 49.6
AT5G53620 Arabidopsis thaliana HOM05D003640 ORTHO05D004439 1.4e-104 384.8 551 48.5
Carub.0008s1397 Capsella rubella HOM05D003640 ORTHO05D004439 4.0e-104 383.3 550 48.5
AL8G28460 Arabidopsis lyrata HOM05D003640 ORTHO05D004439 2.0e-103 380.9 548 48.5
Thhalv10012857m.g Eutrema salsugineum HOM05D003640 ORTHO05D004439 6.4e-102 375.9 551 46.8
Carub.0008s1383 Capsella rubella HOM05D003640 ORTHO05D004439 5.1e-99 366.3 548 47.6
ATR0580G072 Amborella trichopoda HOM05D003640 ORTHO05D004439 2.5e-98 364.0 707 38.3
unitig_92.g28243 Utricularia gibba HOM05D003640 ORTHO05D004439 9.5e-98 362.1 562 44.3
BolC3t14166H Brassica oleracea HOM05D003640 ORTHO05D004439 1.1e-96 358.6 549 46.4
C03p17530 Brassica napus HOM05D003640 ORTHO05D004439 4.0e-96 356.7 549 45.7
BraA03t10798Z Brassica rapa HOM05D003640 ORTHO05D004439 5.2e-96 356.3 549 46.3
A03p15040 Brassica napus HOM05D003640 ORTHO05D004439 2.0e-95 354.4 549 45.5
BcaB01g04251 Brassica carinata HOM05D003640 ORTHO05D004439 3.2e-93 347.1 549 45.5
Sp6g15760 Schrenkiella parvula HOM05D003640 ORTHO05D004439 3.2e-93 347.1 552 45.1
Sp6g15750 Schrenkiella parvula HOM05D003640 ORTHO05D004439 1.2e-92 345.1 551 45.0
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 7.3e-90 335.9 675 39.4
Os08g0543600 Oryza sativa ssp. japonica HOM05D003640 ORTHO05D004439 3.6e-89 333.6 686 39.4
RcHm_v2.0_Chr1g0382631 Rosa chinensis HOM05D003640 ORTHO05D004439 7.6e-87 325.9 318 58.2
BcaB05g22060 Brassica carinata HOM05D003640 ORTHO05D004439 6.0e-84 316.2 553 43.6
Zm00001eb037420 Zea mays HOM05D003640 ORTHO05D004439 3.3e-82 310.5 668 38.9
Zm00001eb198460 Zea mays HOM05D003640 ORTHO05D004439 1.1e-80 305.4 667 38.5
PSO063G3729 Papaver somniferum HOM05D003640 ORTHO05D004439 2.4e-80 304.3 669 37.1
CDE04G2417 Ceratophyllum demersum HOM05D003640 ORTHO05D004439 1.5e-79 301.6 618 37.9
arahy.Tifrunner.gnm1.ann1.3V8RAA Arachis hypogaea HOM05D003640 ORTHO05D004439 3.4e-71 273.9 413 44.6
BcaB01g04247 Brassica carinata HOM05D003640 ORTHO05D004439 1.2e-60 238.8 547 36.0
SHI02298 Sapria himalayana HOM05D003640 ORTHO05D004439 3.9e-59 233.8 259 51.0
QL09p007399 Quercus lobata HOM05D003640 ORTHO05D004439 1.6e-57 228.4 186 69.9
QL93p0214_0021 Quercus lobata HOM05D003640 ORTHO05D004439 1.6e-57 228.4 186 69.9
RcHm_v2.0_Chr1g0382611 Rosa chinensis HOM05D003640 ORTHO05D004439 6.9e-56 223.0 296 50.7
Mapoly0021s0043 Marchantia polymorpha HOM05D003640 ORTHO05D004439 1.0e-43 182.6 778 28.3
Pp3c14_13150 Physcomitrium patens HOM05D003640 ORTHO05D004439 2.4e-40 171.4 639 30.8
BcaC01g06262 Brassica carinata HOM05D003640 ORTHO05D004439 4.4e-34 150.6 547 29.1
CDE07G0792 Ceratophyllum demersum HOM05D003640 ORTHO05D004439 5.3e-32 143.7 212 42.5
SEGI_36158 Sequoiadendron giganteum HOM05D003640 ORTHO05D004439 1.0e-30 139.4 179 47.5
PSO017G5262 Papaver somniferum HOM05D003640 ORTHO05D004439 2.7e-28 131.3 186 44.1
C09p43570 Brassica napus HOM05D003640 ORTHO05D004439 3.6e-28 131.0 103 66.0
COL.COLO4_06022 Corchorus olitorius HOM05D003057 ORTHO05D003904 3.6e-28 131.0 133 60.9
Pp3c17_17470 Physcomitrium patens HOM05D003640 ORTHO05D004439 3.6e-28 131.0 610 27.9
BraA03t10789Z Brassica rapa HOM05D003640 ORTHO05D004439 6.7e-27 126.7 138 57.2
A03p14940 Brassica napus HOM05D003640 ORTHO05D004439 1.5e-26 125.6 138 57.2
PSO170G6851 Papaver somniferum HOM05D003640 ORTHO05D004439 2.6e-26 124.8 163 47.9
unitig_37.g11993 Utricularia gibba HOM05D003640 ORTHO05D004439 1.1e-24 119.4 540 29.8
RcHm_v2.0_Chr1g0382641 Rosa chinensis HOM05D003640 ORTHO05D004439 1.2e-23 115.9 149 51.7
C02p18030 Brassica napus HOM05D003640 ORTHO05D004439 1.3e-22 112.5 449 30.1
BolC2t07935H Brassica oleracea HOM05D003640 ORTHO05D004439 2.2e-22 111.7 414 31.9
AL8G28750 Arabidopsis lyrata HOM05D003640 ORTHO05D004439 2.3e-19 101.7 189 39.7
COL.COLO4_24960 Corchorus olitorius HOM05D003640 ORTHO05D004439 1.1e-16 92.8 107 57.0
CAN.G1387.1 Capsicum annuum HOM05D003640 ORTHO05D004439 1.2e-15 89.4 208 34.1
Dinv06471 Davidia involucrata HOM05D003640 ORTHO05D004439 1.0e-14 86.3 114 48.2
BolC9t57241H Brassica oleracea HOM05D003640 ORTHO05D004439 1.6e-12 79.0 52 71.2
CDE04G2700 Ceratophyllum demersum HOM05D003640 ORTHO05D004439 4.7e-12 77.4 156 39.1
arahy.Tifrunner.gnm1.ann1.JKFZ9B Arachis hypogaea HOM05D003640 ORTHO05D082470 2.3e-11 75.1 63 65.1
C09p43560 Brassica napus HOM05D003640 ORTHO05D004439 8.8e-11 73.2 72 62.5
BolC9t57239H Brassica oleracea HOM05D003640 ORTHO05D004439 3.4e-10 71.2 72 61.1
HanXRQChr11g0343691 Helianthus annuus HOM05D000954 ORTHO05D016146 1.1e-08 66.2 34 88.2
CAN.G598.13 Capsicum annuum HOM05D003640 ORTHO05D004439 4.1e-08 64.3 195 30.8
CAN.G732.35 Capsicum annuum HOM05D003640 ORTHO05D004439 1.6e-07 62.4 183 32.8
HanXRQChr09g0246151 Helianthus annuus HOM05D003640 ORTHO05D016146 2.0e-07 62.0 47 68.1
BcaC03g14392 Brassica carinata HOM05D003640 ORTHO05D004439 4.5e-07 60.8 120 40.8


User provided reference genes

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