Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc2981.2 Carica papaya HOM05D005744 ORTHO05D007503 4.8e-182 641.0 310 100.0
GSVIVG01008538001 Vitis vinifera HOM05D005744 ORTHO05D007503 1.2e-143 513.5 312 78.5
COL.COLO4_28103 Corchorus olitorius HOM05D005744 ORTHO05D007503 3.8e-142 508.4 310 79.7
Thecc.03G128600 Theobroma cacao HOM05D005744 ORTHO05D007503 1.1e-141 506.9 312 79.8
Ciclev10020324m.g Citrus clementina HOM05D005744 ORTHO05D007503 1.9e-141 506.1 312 79.8
Atru.chr9.1122 Acer truncatum HOM05D005744 ORTHO05D007503 4.1e-141 505.0 314 79.3
Gohir.A12G189400 Gossypium hirsutum HOM05D005744 ORTHO05D007503 5.4e-141 504.6 317 78.9
Gorai.008G206000 Gossypium raimondii HOM05D005744 ORTHO05D007503 2.7e-140 502.3 312 79.5
Gohir.D12G191700 Gossypium hirsutum HOM05D005744 ORTHO05D007503 7.8e-140 500.7 312 78.8
Manes.14G051500 Manihot esculenta HOM05D005744 ORTHO05D007503 2.3e-139 499.2 311 79.1
Sed0005313 Sechium edule HOM05D005744 ORTHO05D007503 1.6e-137 493.0 316 75.6
Potri.015G095400 Populus trichocarpa HOM05D005744 ORTHO05D007503 1.1e-136 490.3 309 78.3
PGR044G2189 Punica granatum HOM05D005744 ORTHO05D007503 1.4e-136 490.0 311 78.1
TAR629G2476 Trochodendron aralioides HOM05D005744 ORTHO05D007503 4.0e-136 488.4 310 75.2
CiPaw.11G008100 Carya illinoinensis HOM05D005744 ORTHO05D007503 5.2e-136 488.0 310 75.5
Nn3g16475 Nelumbo nucifera HOM05D005744 ORTHO05D007503 5.2e-136 488.0 310 76.8
Sabra15G0116400 Salix brachista HOM05D005744 ORTHO05D007503 1.2e-135 486.9 311 76.8
QL10p003203 Quercus lobata HOM05D005744 ORTHO05D007503 1.4e-133 479.9 310 75.8
ClCG06G017860 Citrullus lanatus HOM05D005744 ORTHO05D007503 2.4e-133 479.2 320 73.8
CSS0041302 Camellia sinensis var. sinensis HOM05D005744 ORTHO05D007503 4.2e-133 478.4 312 74.4
CARHR232280 Cardamine hirsuta HOM05D005744 ORTHO05D007503 9.3e-133 477.2 309 75.4
vmacro19203 Vaccinium macrocarpon HOM05D005744 ORTHO05D007503 9.3e-133 477.2 310 74.2
CANSAT80G0573 Cannabis sativa HOM05D005744 ORTHO05D007503 1.6e-132 476.5 310 73.9
THA.LOC104825016 Tarenaya hassleriana HOM05D005744 ORTHO05D007503 7.8e-132 474.2 309 76.7
Cfa018827 Carpinus fangiana HOM05D005744 ORTHO05D007503 1.3e-131 473.4 310 74.8
AL7G28320 Arabidopsis lyrata HOM05D005744 ORTHO05D007503 2.3e-131 472.6 309 74.4
Sp7g22860 Schrenkiella parvula HOM05D005744 ORTHO05D007503 3.9e-131 471.9 309 73.5
BraA03t14628Z Brassica rapa HOM05D005744 ORTHO05D007503 1.5e-130 469.9 310 73.9
Oeu010732.1 Olea europaea HOM05D005744 ORTHO05D007503 1.9e-130 469.5 315 74.3
Carub.0007s1619 Capsella rubella HOM05D005744 ORTHO05D007503 5.6e-130 468.0 309 74.8
Thhalv10025348m.g Eutrema salsugineum HOM05D005744 ORTHO05D007503 5.6e-130 468.0 309 73.1
MELO3C026209.2 Cucumis melo HOM05D005744 ORTHO05D007503 9.6e-130 467.2 317 71.3
Actinidia25578 Actinidia chinensis HOM05D005744 ORTHO05D007503 1.3e-129 466.8 310 72.6
BcaC06g32852 Brassica carinata HOM05D005744 ORTHO05D007503 1.3e-129 466.8 317 72.2
BolC7t45875H Brassica oleracea HOM05D005744 ORTHO05D007503 1.3e-129 466.8 317 72.2
HanXRQChr16g0498211 Helianthus annuus HOM05D005744 ORTHO05D007503 1.6e-129 466.5 313 72.8
Migut.E00304 Erythranthe guttata HOM05D005744 ORTHO05D007503 2.8e-129 465.7 310 74.5
A03p55610 Brassica napus HOM05D005744 ORTHO05D007503 3.6e-129 465.3 317 72.2
CsaV3_1G000590 Cucumis sativus L. HOM05D005744 ORTHO05D007503 6.2e-129 464.5 317 70.7
Lj1g0015277 Lotus japonicus HOM05D005744 ORTHO05D007503 8.1e-129 464.2 310 72.9
AT4G24880 Arabidopsis thaliana HOM05D005744 ORTHO05D007503 1.1e-128 463.8 309 73.1
arahy.Tifrunner.gnm1.ann1.DQ5P63 Arachis hypogaea HOM05D005744 ORTHO05D007503 1.1e-128 463.8 310 72.9
arahy.Tifrunner.gnm1.ann1.SJIN4P Arachis hypogaea HOM05D005744 ORTHO05D007503 2.4e-128 462.6 310 72.9
C07p53850 Brassica napus HOM05D005744 ORTHO05D007503 2.4e-128 462.6 317 71.9
Lsat_1_v5_gn_4_80081 Lactuca sativa HOM05D005744 ORTHO05D007503 6.9e-128 461.1 310 72.6
Prupe.5G151700 Prunus persica HOM05D005744 ORTHO05D007503 6.9e-128 461.1 310 73.2
Lalb_Chr08g0237111 Lupinus albus HOM05D005744 ORTHO05D007503 1.2e-127 460.3 310 71.6
Peaxi162Scf00074g00136 Petunia axillaris HOM05D005744 ORTHO05D007503 1.2e-127 460.3 310 72.6
MSTRG.13706 Avicennia marina HOM05D005744 ORTHO05D007503 1.5e-127 459.9 310 72.9
MD14G1157700 Malus domestica HOM05D005744 ORTHO05D007503 7.6e-127 457.6 310 72.3
RhsimUnG0231400 Rhododendron simsii HOM05D005744 ORTHO05D007503 9.9e-127 457.2 310 71.3
Rhsim08G0189700 Rhododendron simsii HOM05D005744 ORTHO05D007503 1.3e-126 456.8 310 71.3
Cc08_g16880 Coffea canephora HOM05D005744 ORTHO05D007503 1.7e-126 456.4 310 71.6
Haze_07221 Corylus avellana HOM05D005744 ORTHO05D007503 1.7e-126 456.4 310 72.9
Psat5g140680 Pisum sativum HOM05D005744 ORTHO05D007503 3.8e-126 455.3 312 70.2
CAN.G567.98 Capsicum annuum HOM05D005744 ORTHO05D007503 1.9e-125 453.0 314 71.7
AUR62025939 Chenopodium quinoa HOM05D005744 ORTHO05D007503 1.9e-125 453.0 314 70.4
AUR62029618 Chenopodium quinoa HOM05D005744 ORTHO05D007503 2.4e-125 452.6 315 70.2
Nitab4.5_0002720g0090 Nicotiana tabacum HOM05D005744 ORTHO05D007503 2.4e-125 452.6 319 71.2
EL10As4g23384 Beta vulgaris HOM05D005744 ORTHO05D007503 5.4e-125 451.4 312 70.5
Ca_24503_v3 Cicer arietinum L. HOM05D005744 ORTHO05D007503 9.3e-125 450.7 311 70.4
DCAR_021616 Daucus carota HOM05D005744 ORTHO05D007503 2.1e-124 449.5 321 70.4
ECA232G3603 Erigeron canadensis HOM05D005744 ORTHO05D007503 2.1e-124 449.5 311 71.1
Medtr3g074980 Medicago truncatula HOM05D005744 ORTHO05D007503 4.6e-124 448.4 312 71.2
PSO782G2798 Papaver somniferum HOM05D005744 ORTHO05D007503 7.9e-124 447.6 304 71.1
PSO801G0019 Papaver somniferum HOM05D005744 ORTHO05D007503 2.5e-122 442.6 304 70.1
Aqoxy3G01542 Aquilegia oxysepala HOM05D005744 ORTHO05D007503 1.3e-121 440.3 310 68.4
TPR.G26152 Trifolium pratense HOM05D005744 ORTHO05D007503 1.3e-121 440.3 311 69.1
Duzib205G1133 Durio zibethinus HOM05D005744 ORTHO05D007503 1.6e-121 439.9 310 72.6
HPP92_020223 Vanilla planifolia HOM05D005744 ORTHO05D007503 2.8e-121 439.1 315 67.6
PGSC0003DMG400012114 Solanum tuberosum HOM05D005744 ORTHO05D007503 3.7e-121 438.7 313 70.0
Sopen08g031450 Solanum pennellii HOM05D005744 ORTHO05D007503 4.8e-121 438.3 313 70.9
Solyc08g083260.3 Solanum lycopersicum HOM05D005744 ORTHO05D007503 6.2e-121 438.0 313 70.6
Glyma.06G170500 Glycine max HOM05D005744 ORTHO05D007503 3.1e-120 435.6 310 69.4
Eucgr.K02730 Eucalyptus grandis HOM05D005744 ORTHO05D007503 5.3e-120 434.9 327 66.7
SalBow5G0293 Salvia bowleyana HOM05D005744 ORTHO05D007503 3.4e-119 432.2 310 69.4
PSO339G3552 Papaver somniferum HOM05D005744 ORTHO05D007503 1.3e-118 430.3 304 68.8
PSO478G2520 Papaver somniferum HOM05D005744 ORTHO05D007503 2.9e-118 429.1 304 68.8
VMungo1309G1043 Vigna mungo HOM05D005744 ORTHO05D007503 6.4e-118 427.9 312 67.6
Lj9A478G92 Lonicera japonica HOM05D005744 ORTHO05D007503 1.9e-117 426.4 317 68.8
Phvul.009G166600 Phaseolus vulgaris HOM05D005744 ORTHO05D007503 3.2e-117 425.6 316 66.8
Ah.02g114920 Amaranthus hybridus HOM05D005744 ORTHO05D007503 7.1e-117 424.5 340 64.1
TPR.G12158 Trifolium pratense HOM05D005744 ORTHO05D007503 1.6e-116 423.3 311 68.5
Actinidia33099 Actinidia chinensis HOM05D005744 ORTHO05D007503 1.8e-115 419.9 234 82.1
MBI07_g31012_MAGBIO Magnolia biondii HOM05D005744 ORTHO05D007503 2.3e-115 419.5 310 68.1
CDE05G2332 Ceratophyllum demersum HOM05D005744 ORTHO05D007503 3.0e-115 419.1 310 65.5
ATR0561G060 Amborella trichopoda HOM05D005744 ORTHO05D007503 4.8e-113 411.8 311 65.9
RcHm_v2.0_Chr7g0190291 Rosa chinensis HOM05D005744 ORTHO05D007503 8.2e-113 411.0 310 65.2
Dinv11169 Davidia involucrata HOM05D005744 ORTHO05D007503 3.1e-112 409.1 315 67.9
FAN13G0489 Fragaria x ananassa HOM05D005744 ORTHO05D007503 2.6e-111 406.0 311 65.9
FAN18G3767 Fragaria x ananassa HOM05D005744 ORTHO05D007503 3.8e-110 402.1 310 65.8
SGA_v2.0_scaffold22G09828 Striga asiatica HOM05D005744 ORTHO05D007503 1.4e-109 400.2 310 65.8
FvH4_5g08230 Fragaria vesca HOM05D005744 ORTHO05D007503 2.5e-109 399.4 310 65.5
Os01g0101300 Oryza sativa ssp. japonica HOM05D005744 ORTHO05D007503 6.0e-108 394.8 309 62.5
FAN08G2910 Fragaria x ananassa HOM05D005744 ORTHO05D007503 3.0e-107 392.5 310 64.2
TAR633G0019 Trochodendron aralioides HOM05D005744 ORTHO05D007503 4.1e-104 382.1 229 75.1
Nitab4.5_0000479g0030 Nicotiana tabacum HOM05D005744 ORTHO05D007503 1.3e-102 377.1 280 68.9
SEGI_05259 Sequoiadendron giganteum HOM05D005744 ORTHO05D007503 1.0e-99 367.5 316 56.3
Mapoly0024s0037 Marchantia polymorpha HOM05D005744 ORTHO05D007503 6.7e-99 364.8 316 57.0
Zm00001eb354570 Zea mays HOM05D005744 ORTHO05D007503 1.9e-98 363.2 310 58.1
RcHm_v2.0_Chr4g0409241 Rosa chinensis HOM05D005744 ORTHO05D007503 2.5e-98 362.8 306 61.4
FvH4_4g11820 Fragaria vesca HOM05D005744 ORTHO05D007503 2.2e-97 359.8 307 60.6
FAN12G3536 Fragaria x ananassa HOM05D005744 ORTHO05D007503 1.1e-96 357.5 307 60.3
Aa31LG7G10960 Aethionema arabicum HOM05D005744 ORTHO05D007503 8.5e-94 347.8 183 86.3
Sc04g0000680 Simmondsia chinensis HOM05D005744 ORTHO05D007503 1.6e-92 343.6 184 83.2
Glyma.04G195500 Glycine max HOM05D005744 ORTHO05D007503 1.0e-91 340.9 201 74.6
Pp3c8_11540 Physcomitrium patens HOM05D005744 ORTHO05D007503 1.1e-90 337.4 318 52.5
FAN12G3591 Fragaria x ananassa HOM05D005744 ORTHO05D007503 6.3e-89 331.6 289 59.5
Eucgr.L02977 Eucalyptus grandis HOM05D005744 ORTHO05D007503 1.1e-88 330.9 282 63.5
unitig_27.g25288 Utricularia gibba HOM05D005744 ORTHO05D007503 3.1e-88 329.3 310 55.8
SMO364G0648 Selaginella moellendorffii HOM05D005744 ORTHO05D007503 1.5e-87 327.0 309 52.4
SalBow5G5674 Salvia bowleyana HOM05D005744 ORTHO05D007503 1.5e-82 310.5 310 54.8
FAN07G2643 Fragaria x ananassa HOM05D005744 ORTHO05D007503 5.7e-82 308.5 210 68.6
SEGI_21905 Sequoiadendron giganteum HOM05D005744 ORTHO05D007503 7.2e-77 291.6 183 67.2
SHI06365 Sapria himalayana HOM05D005744 ORTHO05D007503 3.5e-71 272.7 376 44.4
MCO07G390 Micromonas commoda HOM05D005744 ORTHO05D007503 7.3e-53 211.8 330 39.1
RcHm_v2.0_Chr4g0407951 Rosa chinensis HOM05D005744 ORTHO05D007503 4.1e-48 196.1 255 45.5
Lsat_1_v5_gn_8_77640 Lactuca sativa HOM05D005744 ORTHO05D007503 1.6e-44 184.1 126 71.4
PRCOL_00001155 Prasinoderma coloniale HOM05D005744 ORTHO05D007503 2.3e-43 180.3 329 34.7
AagrBONN_evm.TU.Sc2ySwM_344.2997 Anthoceros agrestis HOM05D005744 ORTHO05D007503 5.6e-37 159.1 112 56.2
HanXRQChr10g0289761 Helianthus annuus HOM05D005744 ORTHO05D007503 4.7e-36 156.0 96 69.8
Cre16.g666000 Chlamydomonas reinhardtii HOM05D005744 ORTHO05D007503 3.7e-33 146.4 483 27.1
Aa31LG7G10970 Aethionema arabicum HOM05D005744 ORTHO05D007503 2.5e-29 133.7 130 63.1
CDE12G0192 Ceratophyllum demersum HOM05D005744 ORTHO05D007503 7.6e-26 122.1 148 51.4
RcHm_v2.0_Chr4g0407901 Rosa chinensis HOM05D005744 ORTHO05D007503 4.7e-20 102.8 153 42.5
Lsat_1_v5_gn_8_150141 Lactuca sativa HOM05D005744 ORTHO05D048266 2.1e-12 77.4 41 80.5
COL.COLO4_31215 Corchorus olitorius HOM05D005744 ORTHO05D007503 2.0e-10 70.9 45 84.4
CDE05G3540 Ceratophyllum demersum HOM05D005744 ORTHO05D130478 9.9e-10 68.6 112 42.9
HanXRQChr10g0289791 Helianthus annuus HOM05D005744 ORTHO05D048266 8.4e-09 65.5 39 71.8


User provided reference genes

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