Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc298.2 Carica papaya HOM05D007059 ORTHO05D009155 3.8e-128 461.5 225 100.0
Thecc.02G295400 Theobroma cacao HOM05D007059 ORTHO05D009155 2.0e-68 263.1 220 65.9
Cfa008725 Carpinus fangiana HOM05D004663 ORTHO05D006325 1.7e-67 260.0 218 63.3
TAR629G1440 Trochodendron aralioides HOM05D007059 ORTHO05D009155 2.9e-67 259.2 218 63.3
CiPaw.05G167400 Carya illinoinensis HOM05D007059 ORTHO05D009155 8.4e-67 257.7 217 63.6
Atru.chr11.1222 Acer truncatum HOM05D007059 ORTHO05D009155 1.9e-66 256.5 217 64.1
Haze_11738 Corylus avellana HOM05D007059 ORTHO05D009155 7.1e-66 254.6 211 64.0
GSVIVG01010187001 Vitis vinifera HOM05D007059 ORTHO05D009155 7.1e-66 254.6 217 65.4
TWI77G0260 Tripterygium wilfordii HOM05D007059 ORTHO05D009155 9.3e-66 254.2 203 66.5
COL.COLO4_16620 Corchorus olitorius HOM05D007059 ORTHO05D009155 1.2e-65 253.8 220 62.7
Sabra10G0129500 Salix brachista HOM05D007059 ORTHO05D009155 3.9e-64 248.8 222 64.0
MD16G1006000 Malus domestica HOM05D007059 ORTHO05D009155 5.1e-64 248.4 216 64.8
Potri.010G169700 Populus trichocarpa HOM05D007059 ORTHO05D009155 5.1e-64 248.4 222 64.0
Ciclev10033522m.g Citrus clementina HOM05D007059 ORTHO05D009155 3.6e-62 242.3 218 63.3
Glyma.11G104100 Glycine max HOM05D007059 ORTHO05D009155 3.6e-62 242.3 213 62.0
Manes.16G044801 Manihot esculenta HOM05D007059 ORTHO05D009155 3.6e-62 242.3 221 62.0
Prupe.1G344600 Prunus persica HOM05D007059 ORTHO05D009155 3.6e-62 242.3 219 63.5
Phvul.011G032300 Phaseolus vulgaris HOM05D007059 ORTHO05D009155 1.1e-61 240.7 213 62.4
Nn4g24915 Nelumbo nucifera HOM05D007059 ORTHO05D009155 4.0e-61 238.8 222 61.7
FvH4_4g36660 Fragaria vesca HOM05D007059 ORTHO05D009155 6.9e-61 238.0 214 61.7
FAN12G0665 Fragaria x ananassa HOM05D007059 ORTHO05D009155 6.9e-61 238.0 214 61.7
Glyma.12G029100 Glycine max HOM05D007059 ORTHO05D009155 6.9e-61 238.0 213 60.1
Gorai.002G167400 Gossypium raimondii HOM05D007059 ORTHO05D009155 9.0e-61 237.7 219 61.2
Lj3A851T65 Lonicera japonica HOM05D007059 ORTHO05D009155 9.0e-61 237.7 210 64.3
RcHm_v2.0_Chr4g0446371 Rosa chinensis HOM05D007059 ORTHO05D009155 9.0e-61 237.7 214 62.1
FAN07G2854 Fragaria x ananassa HOM05D007059 ORTHO05D009155 2.6e-60 236.1 214 61.7
CSS0038027 Camellia sinensis var. sinensis HOM05D007059 ORTHO05D009155 3.4e-60 235.7 219 58.4
VMungo1127G1389 Vigna mungo HOM05D007059 ORTHO05D009155 5.8e-60 235.0 213 61.5
Rhsim04G0168700 Rhododendron simsii HOM05D007059 ORTHO05D009155 9.9e-60 234.2 223 59.6
TPR.G21564 Trifolium pratense HOM05D007059 ORTHO05D009155 9.9e-60 234.2 215 60.9
Lalb_Chr01g0001591 Lupinus albus HOM05D007059 ORTHO05D009155 1.7e-59 233.4 220 60.0
Gohir.D01G138500 Gossypium hirsutum HOM05D007059 ORTHO05D009155 2.9e-59 232.6 219 60.3
Gohir.A01G145900 Gossypium hirsutum HOM05D007059 ORTHO05D009155 8.4e-59 231.1 219 60.3
Ca_03042_v3 Cicer arietinum L. HOM05D007059 ORTHO05D009155 1.4e-58 230.3 214 61.2
arahy.Tifrunner.gnm1.ann1.NRJ0Q8 Arachis hypogaea HOM05D007059 ORTHO05D009155 1.9e-58 229.9 169 71.6
arahy.Tifrunner.gnm1.ann1.PC0HA4 Arachis hypogaea HOM05D007059 ORTHO05D009155 1.9e-58 229.9 169 71.6
vmacro08590 Vaccinium macrocarpon HOM05D007059 ORTHO05D009155 1.9e-58 229.9 223 57.8
ClCG11G001160 Citrullus lanatus HOM05D007059 ORTHO05D009155 4.2e-58 228.8 222 58.1
MELO3C020030.2 Cucumis melo HOM05D007059 ORTHO05D009155 4.2e-58 228.8 218 57.3
Sc10g0008670 Simmondsia chinensis HOM05D007059 ORTHO05D009155 1.2e-57 227.3 218 59.2
Psat7g174240 Pisum sativum HOM05D007059 ORTHO05D009155 1.6e-57 226.9 215 59.1
CAN.G624.23 Capsicum annuum HOM05D007059 ORTHO05D009155 4.6e-57 225.3 215 58.1
Sp3g17910 Schrenkiella parvula HOM05D007059 ORTHO05D009155 6.0e-57 224.9 204 62.3
Carub.0003s1980 Capsella rubella HOM05D007059 ORTHO05D009155 1.3e-56 223.8 204 61.8
PGSC0003DMG400032539 Solanum tuberosum HOM05D007059 ORTHO05D009155 3.0e-56 222.6 216 57.9
Solyc04g009370.4 Solanum lycopersicum HOM05D007059 ORTHO05D009155 3.9e-56 222.2 216 57.9
Sopen04g004490 Solanum pennellii HOM05D007059 ORTHO05D009155 3.9e-56 222.2 216 57.9
Nitab4.5_0002113g0150 Nicotiana tabacum HOM05D007059 ORTHO05D009155 8.7e-56 221.1 215 56.7
Nitab4.5_0007261g0020 Nicotiana tabacum HOM05D007059 ORTHO05D009155 1.1e-55 220.7 215 56.7
Sed0015909 Sechium edule HOM05D007059 ORTHO05D009155 1.1e-55 220.7 221 56.6
MBI06_g22349_MAGBIO Magnolia biondii HOM05D007059 ORTHO05D009155 1.5e-55 220.3 216 56.5
Eucgr.G02016 Eucalyptus grandis HOM05D007059 ORTHO05D009155 2.5e-55 219.5 217 56.7
AL3G33460 Arabidopsis lyrata HOM05D007059 ORTHO05D009155 4.3e-55 218.8 209 60.3
Actinidia38411 Actinidia chinensis HOM05D007059 ORTHO05D009155 7.4e-55 218.0 220 56.8
Peaxi162Scf01172g00004 Petunia axillaris HOM05D007059 ORTHO05D009155 1.3e-54 217.2 221 56.1
BcaC09g48947 Brassica carinata HOM05D007059 ORTHO05D009155 1.6e-54 216.9 206 62.1
C01p44250 Brassica napus HOM05D007059 ORTHO05D009155 1.6e-54 216.9 206 62.1
BolC1t04385H Brassica oleracea HOM05D007059 ORTHO05D009155 1.6e-54 216.9 206 62.1
CARHR095430 Cardamine hirsuta HOM05D007059 ORTHO05D009155 3.6e-54 215.7 208 59.1
Thhalv10021482m.g Eutrema salsugineum HOM05D007059 ORTHO05D009155 3.6e-54 215.7 204 60.3
Medtr4g074210 Medicago truncatula HOM05D007059 ORTHO05D009155 3.6e-54 215.7 218 56.4
Lj3g0001367 Lotus japonicus HOM05D007059 ORTHO05D009155 6.2e-54 214.9 156 73.1
PSO782G1004 Papaver somniferum HOM05D007059 ORTHO05D009155 8.1e-54 214.5 225 54.7
ECA234G4546 Erigeron canadensis HOM05D007059 ORTHO05D009155 2.4e-53 213.0 202 59.9
PSO063G1277 Papaver somniferum HOM05D007059 ORTHO05D009155 5.3e-53 211.8 225 54.2
Aqoxy3G04246 Aquilegia oxysepala HOM05D007059 ORTHO05D009155 2.0e-52 209.9 159 69.8
HanXRQChr01g0028541 Helianthus annuus HOM05D007059 ORTHO05D009155 2.6e-52 209.5 119 84.0
SGA_v2.0_scaffold88G27235 Striga asiatica HOM05D007059 ORTHO05D009155 9.9e-52 207.6 227 53.3
Lsat_1_v5_gn_4_26421 Lactuca sativa HOM05D007059 ORTHO05D009155 4.9e-51 205.3 229 53.7
Cc11_g00200 Coffea canephora HOM05D007059 ORTHO05D009155 6.4e-51 204.9 179 61.5
Duzib251G0490 Durio zibethinus HOM05D007059 ORTHO05D009155 8.4e-51 204.5 219 55.3
CANSAT35G1437 Cannabis sativa HOM05D007059 ORTHO05D009155 1.9e-50 203.4 133 77.4
Migut.E00704 Erythranthe guttata HOM05D007059 ORTHO05D009155 2.4e-50 203.0 152 67.1
A01p34850 Brassica napus HOM05D007059 ORTHO05D009155 4.2e-50 202.2 212 58.5
BraA01t03568Z Brassica rapa HOM05D007059 ORTHO05D009155 4.2e-50 202.2 212 58.5
Oeu027905.1 Olea europaea HOM05D007059 ORTHO05D009155 7.1e-50 201.4 144 73.6
Aa31LG8G6740 Aethionema arabicum HOM05D007059 ORTHO05D009155 1.2e-49 200.7 269 47.6
Migut.E00613 Erythranthe guttata HOM05D007059 ORTHO05D009155 1.2e-49 200.7 143 69.2
AUR62017646 Chenopodium quinoa HOM05D007059 ORTHO05D009155 2.1e-49 199.9 220 53.2
MSTRG.2053 Avicennia marina HOM05D007059 ORTHO05D009155 2.7e-49 199.5 151 67.5
unitig_27.g25281 Utricularia gibba HOM05D007059 ORTHO05D009155 3.5e-49 199.1 219 53.0
AUR62012864 Chenopodium quinoa HOM05D007059 ORTHO05D009155 6.0e-49 198.4 220 52.3
Hund08500 Selenicereus undatus HOM05D007059 ORTHO05D009155 1.3e-48 197.2 207 54.6
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 1.1e-47 194.1 137 73.0
ATR0124G031 Amborella trichopoda HOM05D007059 ORTHO05D009155 1.9e-47 193.4 125 72.8
HPP92_002491 Vanilla planifolia HOM05D007059 ORTHO05D009155 3.1e-45 186.0 220 50.9
HPP92_002544 Vanilla planifolia HOM05D007059 ORTHO05D009155 4.0e-45 185.7 142 67.6
EL10Ac9g22903 Beta vulgaris HOM05D007059 ORTHO05D009155 2.0e-44 183.3 154 60.4
THA.LOC104801903 Tarenaya hassleriana HOM05D007059 ORTHO05D009155 5.8e-44 181.8 204 55.9
Zm00001eb259420 Zea mays HOM05D007059 ORTHO05D009155 1.7e-43 180.3 104 82.7
Pp3c10_16080 Physcomitrium patens HOM05D007059 ORTHO05D009155 8.4e-43 177.9 127 66.9
Pp3c2_14430 Physcomitrium patens HOM05D007059 ORTHO05D009155 2.5e-42 176.4 146 59.6
SMO114G0039 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 2.3e-40 169.9 113 71.7
AagrBONN_evm.TU.Sc2ySwM_344.1288 Anthoceros agrestis HOM05D007059 ORTHO05D009155 2.5e-39 166.4 144 58.3
Mapoly0055s0010 Marchantia polymorpha HOM05D007059 ORTHO05D009155 4.1e-37 159.1 131 59.5
PGR031G0357 Punica granatum HOM05D007059 ORTHO05D009155 5.9e-36 155.2 161 52.8
CsaV3_5G013210 Cucumis sativus L. HOM05D007059 ORTHO05D009155 3.2e-34 149.4 179 50.3
Dinv01917 Davidia involucrata HOM05D007059 ORTHO05D009155 6.1e-33 145.2 159 52.2
Actinidia13703 Actinidia chinensis HOM05D007059 ORTHO05D009155 2.2e-30 136.7 154 51.9
CBR_g48375 Chara braunii HOM05D007059 ORTHO05D009155 2.4e-29 133.3 118 55.1
AT3G19900 Arabidopsis thaliana HOM05D007059 ORTHO05D009155 5.3e-29 132.1 163 50.3
CDE04G0067 Ceratophyllum demersum HOM05D007059 ORTHO05D009155 1.5e-28 130.6 125 56.8
SEGI_27177 Sequoiadendron giganteum HOM05D007059 ORTHO05D009155 3.8e-19 99.4 61 75.4
Cre01.g007050 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D009155 1.3e-14 84.3 111 40.5
SMO364G0884 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 2.2e-11 73.6 48 70.8
BraA05t21808Z Brassica rapa HOM05D007059 ORTHO05D040342 6.5e-11 72.0 48 77.1
BolC5t33201H Brassica oleracea HOM05D007059 ORTHO05D009155 8.5e-11 71.6 62 61.3
Actinidia14379 Actinidia chinensis HOM05D007059 ORTHO05D009155 1.9e-10 70.5 44 75.0
Cre03.g197850 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D034487 3.2e-10 69.7 138 31.2
A05p29230 Brassica napus HOM05D007059 ORTHO05D040342 5.5e-10 68.9 48 75.0
MCO14G049 Micromonas commoda HOM05D007059 ORTHO05D009155 6.1e-09 65.5 86 36.0


User provided reference genes

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