Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc2974.2 Carica papaya HOM05D000922 ORTHO05D007418 3.6e-185 651.4 312 100.0
Duzib205G1607 Durio zibethinus HOM05D000922 ORTHO05D007418 4.5e-143 511.5 312 76.0
Atru.chr9.2494 Acer truncatum HOM05D000922 ORTHO05D007418 2.2e-142 509.2 315 75.2
QL10p011002 Quercus lobata HOM05D000922 ORTHO05D007418 1.2e-140 503.4 311 76.8
Thecc.03G014400 Theobroma cacao HOM05D000922 ORTHO05D007418 1.2e-140 503.4 315 74.3
CiPaw.11G024700 Carya illinoinensis HOM05D000922 ORTHO05D007418 1.0e-139 500.4 312 74.7
GSVIVG01007724001 Vitis vinifera HOM05D000922 ORTHO05D007418 3.0e-139 498.8 317 73.2
Cfa019149 Carpinus fangiana HOM05D000922 ORTHO05D007418 3.9e-139 498.4 313 74.8
Potri.012G082500 Populus trichocarpa HOM05D000922 ORTHO05D007418 4.3e-138 495.0 314 74.8
Gohir.D12G275700 Gossypium hirsutum HOM05D000922 ORTHO05D007418 2.1e-137 492.7 316 73.7
Gorai.008G296200 Gossypium raimondii HOM05D000922 ORTHO05D007418 2.1e-137 492.7 316 73.7
Manes.14G064400 Manihot esculenta HOM05D000922 ORTHO05D007418 2.4e-136 489.2 313 72.5
Ciclev10018588m.g Citrus clementina HOM05D000922 ORTHO05D007418 9.0e-136 487.3 315 72.1
CANSAT80G2096 Cannabis sativa HOM05D000922 ORTHO05D007418 1.5e-135 486.5 317 73.5
Potri.015G078300 Populus trichocarpa HOM05D000922 ORTHO05D007418 2.0e-135 486.1 315 73.3
Sabra15G0102900 Salix brachista HOM05D000922 ORTHO05D007418 2.0e-135 486.1 315 73.7
TAR622G0946 Trochodendron aralioides HOM05D000922 ORTHO05D007418 3.4e-135 485.3 316 73.4
Haze_07516 Corylus avellana HOM05D000922 ORTHO05D007418 7.6e-135 484.2 341 68.9
Sabra12G0059200 Salix brachista HOM05D000922 ORTHO05D007418 1.0e-134 483.8 314 72.6
Prupe.5G171800 Prunus persica HOM05D000922 ORTHO05D007418 1.1e-133 480.3 316 73.7
vmacro19399 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 4.2e-133 478.4 315 72.1
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 2.7e-132 475.7 315 72.4
RcHm_v2.0_Chr7g0193371 Rosa chinensis HOM05D000922 ORTHO05D007418 2.7e-132 475.7 316 73.1
Medtr3g077620 Medicago truncatula HOM05D000922 ORTHO05D007418 3.9e-131 471.9 314 70.7
TPR.G20687 Trifolium pratense HOM05D000922 ORTHO05D007418 6.7e-131 471.1 315 70.8
MD06G1172500 Malus domestica HOM05D000922 ORTHO05D007418 8.7e-131 470.7 316 72.2
FAN08G1289 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.1e-130 470.3 316 71.8
FvH4_5g05470 Fragaria vesca HOM05D000922 ORTHO05D007418 2.5e-130 469.2 315 71.7
FAN18G1332 Fragaria x ananassa HOM05D000922 ORTHO05D007418 4.3e-130 468.4 316 71.5
MD14G1178400 Malus domestica HOM05D000922 ORTHO05D007418 5.7e-130 468.0 316 71.2
FAN04G3074 Fragaria x ananassa HOM05D000922 ORTHO05D007418 9.6e-130 467.2 316 70.9
Duzib068G1349 Durio zibethinus HOM05D000922 ORTHO05D007418 1.3e-129 466.8 320 70.3
Glyma.04G184600 Glycine max HOM05D000922 ORTHO05D007418 2.1e-129 466.1 316 69.0
Ca_16166_v3 Cicer arietinum L. HOM05D000922 ORTHO05D007418 2.8e-129 465.7 315 68.9
Lj1g0015886 Lotus japonicus HOM05D000922 ORTHO05D007418 4.8e-129 464.9 315 68.9
Glyma.06G181100 Glycine max HOM05D000922 ORTHO05D007418 1.4e-128 463.4 311 69.1
Phvul.009G177300 Phaseolus vulgaris HOM05D000922 ORTHO05D007418 1.4e-128 463.4 319 68.3
Hma1.2p1_2165F.1_g315780 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 1.5e-127 459.9 314 71.0
TWI23G1000 Tripterygium wilfordii HOM05D000922 ORTHO05D007418 2.0e-127 459.5 292 74.3
Hma1.2p1_2469F.1_g322680 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 5.9e-127 458.0 315 70.5
Nn4g22714 Nelumbo nucifera HOM05D000922 ORTHO05D007418 7.6e-127 457.6 317 68.5
Psat0ss3962g0400 Pisum sativum HOM05D000922 ORTHO05D007418 7.6e-127 457.6 311 68.8
CSS0017974 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D007418 1.0e-126 457.2 316 69.9
Lj9A446G57 Lonicera japonica HOM05D000922 ORTHO05D007418 2.9e-126 455.7 315 69.8
Lalb_Chr23g0273281 Lupinus albus HOM05D000922 ORTHO05D007418 3.8e-126 455.3 315 68.6
VMungo1309G1607 Vigna mungo HOM05D000922 ORTHO05D007418 5.0e-126 454.9 315 67.6
Eucgr.B00297 Eucalyptus grandis HOM05D000922 ORTHO05D007418 1.9e-125 453.0 317 68.8
DCAR_016480 Daucus carota HOM05D000922 ORTHO05D007418 2.7e-124 449.1 315 67.6
PSO478G1387 Papaver somniferum HOM05D000922 ORTHO05D007418 1.3e-123 446.8 314 67.2
FAN13G2825 Fragaria x ananassa HOM05D000922 ORTHO05D007418 2.3e-123 446.0 364 61.8
PSO017G6576 Papaver somniferum HOM05D000922 ORTHO05D007418 1.1e-122 443.7 314 66.9
PGR083G1532 Punica granatum HOM05D000922 ORTHO05D007418 1.1e-122 443.7 314 67.2
arahy.Tifrunner.gnm1.ann1.9TFG5W Arachis hypogaea HOM05D000922 ORTHO05D007418 3.3e-122 442.2 316 65.5
Aqoxy3G02884 Aquilegia oxysepala HOM05D000922 ORTHO05D007418 4.3e-122 441.8 310 67.1
arahy.Tifrunner.gnm1.ann1.F0ZNJX Arachis hypogaea HOM05D000922 ORTHO05D007418 4.3e-122 441.8 318 65.4
CAN.G1166.3 Capsicum annuum HOM05D000922 ORTHO05D007418 1.1e-120 437.2 319 64.6
ClCG06G017060 Citrullus lanatus HOM05D000922 ORTHO05D007418 1.1e-120 437.2 316 66.8
Sopen03g031910 Solanum pennellii HOM05D000922 ORTHO05D007418 1.8e-120 436.4 319 63.9
HanXRQChr05g0155771 Helianthus annuus HOM05D000922 ORTHO05D007418 4.5e-119 431.8 314 65.0
BcaC09g49852 Brassica carinata HOM05D000922 ORTHO05D007418 1.7e-118 429.9 312 66.7
Sed0021678 Sechium edule HOM05D000922 ORTHO05D007418 5.0e-118 428.3 311 64.3
Carub.0005s1432 Capsella rubella HOM05D000922 ORTHO05D007418 6.5e-118 427.9 316 67.1
BcaB05g22925 Brassica carinata HOM05D000922 ORTHO05D007418 1.4e-117 426.8 312 66.3
Solyc03g112830.4 Solanum lycopersicum HOM05D000922 ORTHO05D007418 1.4e-117 426.8 318 62.9
Cc04_g12110 Coffea canephora HOM05D000922 ORTHO05D007418 1.9e-117 426.4 321 64.2
Peaxi162Scf00255g01019 Petunia axillaris HOM05D000922 ORTHO05D007418 1.9e-117 426.4 320 63.8
Aa31LG4G16800 Aethionema arabicum HOM05D000922 ORTHO05D007418 4.2e-117 425.2 315 67.0
Nitab4.5_0001514g0050 Nicotiana tabacum HOM05D000922 ORTHO05D007418 4.2e-117 425.2 318 64.8
AL5G27540 Arabidopsis lyrata HOM05D000922 ORTHO05D007418 5.5e-117 424.9 316 66.8
BolC1t03155H Brassica oleracea HOM05D000922 ORTHO05D007418 7.2e-117 424.5 313 66.1
Sp5g13830 Schrenkiella parvula HOM05D000922 ORTHO05D007418 7.2e-117 424.5 314 65.9
FAN18G2587 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.2e-116 423.7 394 56.6
Peaxi162Scf00089g01840 Petunia axillaris HOM05D000922 ORTHO05D007418 1.2e-116 423.7 317 62.5
Sc04g0001750 Simmondsia chinensis HOM05D000922 ORTHO05D007418 1.6e-116 423.3 320 65.9
BraA01t02462Z Brassica rapa HOM05D000922 ORTHO05D007418 3.6e-116 422.2 313 66.1
A01p25510 Brassica napus HOM05D000922 ORTHO05D007418 4.6e-116 421.8 313 66.1
CARHR156940 Cardamine hirsuta HOM05D000922 ORTHO05D007418 6.1e-116 421.4 314 66.6
AT3G48195 Arabidopsis thaliana HOM05D000922 ORTHO05D007418 1.4e-115 420.2 313 66.5
Thhalv10010097m.g Eutrema salsugineum HOM05D000922 ORTHO05D007418 1.4e-115 420.2 315 65.7
EL10Ac5g10730 Beta vulgaris HOM05D000922 ORTHO05D007418 3.0e-115 419.1 319 63.0
Lsat_1_v5_gn_5_15041 Lactuca sativa HOM05D000922 ORTHO05D007418 2.0e-114 416.4 300 64.0
ATR1091G081 Amborella trichopoda HOM05D000922 ORTHO05D007418 2.8e-113 412.5 317 64.4
AUR62008194 Chenopodium quinoa HOM05D000922 ORTHO05D007418 4.8e-113 411.8 312 63.5
AUR62030946 Chenopodium quinoa HOM05D000922 ORTHO05D007418 6.3e-113 411.4 312 63.1
Migut.O00098 Erythranthe guttata HOM05D000922 ORTHO05D007418 2.4e-112 409.5 319 64.3
Os01g0549500 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D007418 1.7e-110 403.3 311 61.7
Hund02754 Selenicereus undatus HOM05D000922 ORTHO05D007418 2.9e-110 402.5 317 62.1
MSTRG.23139 Avicennia marina HOM05D000922 ORTHO05D007418 1.4e-107 393.7 316 59.5
SGA_v2.0_scaffold90G27900 Striga asiatica HOM05D000922 ORTHO05D007418 6.7e-107 391.3 318 60.1
Ah.02g110580 Amaranthus hybridus HOM05D000922 ORTHO05D007418 2.0e-106 389.8 317 60.9
MELO3C017091.2 Cucumis melo HOM05D000922 ORTHO05D007418 1.3e-105 387.1 330 59.7
THA.LOC104798972 Tarenaya hassleriana HOM05D000922 ORTHO05D007418 1.3e-102 377.1 212 81.6
CDE06G1806 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 2.9e-102 375.9 274 62.0
HPP92_009707 Vanilla planifolia HOM05D000922 ORTHO05D007418 5.0e-102 375.2 239 69.5
unitig_26.g9619 Utricularia gibba HOM05D000922 ORTHO05D007418 3.0e-99 365.9 315 55.6
SalBow5G1735 Salvia bowleyana HOM05D000922 ORTHO05D007418 2.7e-95 352.8 212 74.5
SalBow5G3118 Salvia bowleyana HOM05D000922 ORTHO05D007418 2.7e-95 352.8 212 74.5
Oeu016401.1 Olea europaea HOM05D000922 ORTHO05D007418 3.8e-94 349.0 212 75.5
Dinv20638 Davidia involucrata HOM05D000922 ORTHO05D007418 3.8e-78 295.8 228 68.0
Gohir.A12G275000 Gossypium hirsutum HOM05D000922 ORTHO05D007418 6.1e-76 288.5 153 85.0
Mapoly0023s0026 Marchantia polymorpha HOM05D000922 ORTHO05D007418 6.1e-76 288.5 238 54.6
SMO367G0209 Selaginella moellendorffii HOM05D000922 ORTHO05D007418 9.2e-72 274.6 237 48.9
Zm00001eb162380 Zea mays HOM05D000922 ORTHO05D007418 1.3e-70 270.8 163 73.0
ECA246G4214 Erigeron canadensis HOM05D000922 ORTHO05D007418 8.6e-70 268.1 223 60.5
Pp3c26_1280 Physcomitrium patens HOM05D000922 ORTHO05D007418 4.3e-69 265.8 238 50.0
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.2e-68 264.2 263 56.7
SEGI_24933 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 1.0e-67 261.2 277 45.5
SHI17077 Sapria himalayana HOM05D000922 ORTHO05D007418 1.0e-62 244.6 489 31.7
SEGI_19196 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 3.9e-62 242.7 164 66.5
Dinv38573 Davidia involucrata HOM05D000922 ORTHO05D007418 1.1e-59 234.6 123 84.6
Nitab4.5_0000025g0520 Nicotiana tabacum HOM05D000922 ORTHO05D007418 3.1e-43 179.9 318 35.5
Actinidia33077 Actinidia chinensis HOM05D000922 ORTHO05D007418 8.4e-41 171.8 109 71.6
CsaV3_1G001450 Cucumis sativus L. HOM05D000922 ORTHO05D007418 3.6e-36 156.4 88 75.0
COL.COLO4_30068 Corchorus olitorius HOM05D000922 ORTHO05D007418 2.2e-33 147.1 70 85.7
Psat4g066520 Pisum sativum HOM05D001026 ORTHO05D007418 9.6e-21 105.1 84 60.7
PRCOL_00005721 Prasinoderma coloniale HOM05D000922 ORTHO05D007418 3.4e-18 96.7 186 33.3
Actinidia33076 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.4e-16 91.3 170 38.2
Peaxi162Scf00397g00009 Petunia axillaris HOM05D000922 ORTHO05D015732 2.5e-16 90.5 75 56.0
Peaxi162Scf00470g00024 Petunia axillaris HOM05D000861 ORTHO05D007418 4.2e-16 89.7 101 46.5
Peaxi162Scf00009g02111 Petunia axillaris HOM05D000861 ORTHO05D007418 5.5e-16 89.4 74 56.8
CAN.G1651.1 Capsicum annuum HOM05D003439 ORTHO05D000484 9.3e-16 88.6 68 58.8
Peaxi162Scf01130g00212 Petunia axillaris HOM05D000861 ORTHO05D007418 2.7e-15 87.0 51 72.5
Peaxi162Scf00304g01332 Petunia axillaris HOM05D000922 ORTHO05D007418 7.9e-15 85.5 78 52.6
Actinidia19330 Actinidia chinensis HOM05D000922 ORTHO05D007418 3.8e-09 66.6 68 52.9
CDE07G0520 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 1.6e-07 61.2 41 56.1
Cfa000646 Carpinus fangiana HOM05D000922 ORTHO05D007418 2.7e-07 60.5 34 70.6


User provided reference genes

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