Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc2974.1 Carica papaya HOM05D000922 ORTHO05D007418 0.0e+00 1448.3 725 100.0
FAN18G2587 Fragaria x ananassa HOM05D000922 ORTHO05D007418 9.4e-120 435.3 794 40.3
CiPaw.11G024700 Carya illinoinensis HOM05D000922 ORTHO05D007418 1.8e-118 431.0 836 38.0
FvH4_5g05470 Fragaria vesca HOM05D000922 ORTHO05D007418 3.0e-118 430.3 792 40.2
Manes.14G064400 Manihot esculenta HOM05D000922 ORTHO05D007418 3.0e-118 430.3 765 41.7
FAN18G1332 Fragaria x ananassa HOM05D000922 ORTHO05D007418 3.7e-116 423.3 792 39.8
Atru.chr9.2494 Acer truncatum HOM05D000922 ORTHO05D007418 4.8e-116 422.9 807 40.5
GSVIVG01007724001 Vitis vinifera HOM05D000922 ORTHO05D007418 1.4e-115 421.4 697 43.0
MD06G1172500 Malus domestica HOM05D000922 ORTHO05D007418 3.5e-114 416.8 822 39.7
Thecc.03G014400 Theobroma cacao HOM05D000922 ORTHO05D007418 7.7e-114 415.6 765 40.5
TWI23G1000 Tripterygium wilfordii HOM05D000922 ORTHO05D007418 1.4e-110 404.8 795 40.5
Cfa019149 Carpinus fangiana HOM05D000922 ORTHO05D007418 8.9e-110 402.1 851 37.3
Duzib205G1607 Durio zibethinus HOM05D000922 ORTHO05D007418 2.0e-109 401.0 725 40.1
FAN08G1289 Fragaria x ananassa HOM05D000922 ORTHO05D007418 3.7e-108 396.7 795 38.9
Prupe.5G171800 Prunus persica HOM05D000922 ORTHO05D007418 4.9e-108 396.4 809 37.8
Haze_07516 Corylus avellana HOM05D000922 ORTHO05D007418 6.3e-108 396.0 833 37.2
RcHm_v2.0_Chr7g0193371 Rosa chinensis HOM05D000922 ORTHO05D007418 2.4e-107 394.0 791 38.6
Ciclev10018588m.g Citrus clementina HOM05D000922 ORTHO05D007418 9.2e-107 392.1 816 37.6
Potri.015G078300 Populus trichocarpa HOM05D000922 ORTHO05D007418 9.2e-107 392.1 778 39.5
Hma1.2p1_2469F.1_g322680 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 2.9e-105 387.1 799 37.8
FAN13G2825 Fragaria x ananassa HOM05D000922 ORTHO05D007418 3.9e-105 386.7 802 38.7
Duzib068G1349 Durio zibethinus HOM05D000922 ORTHO05D007418 8.6e-105 385.6 754 38.7
Gohir.D12G275700 Gossypium hirsutum HOM05D000922 ORTHO05D007418 1.9e-104 384.4 731 40.9
Gohir.A12G275000 Gossypium hirsutum HOM05D000922 ORTHO05D007418 1.6e-103 381.3 764 38.7
Potri.012G082500 Populus trichocarpa HOM05D000922 ORTHO05D007418 2.1e-103 380.9 730 41.0
MD14G1178400 Malus domestica HOM05D000922 ORTHO05D007418 3.6e-103 380.2 812 37.2
THA.LOC104798972 Tarenaya hassleriana HOM05D000922 ORTHO05D007418 1.0e-102 378.6 716 39.1
TAR622G0946 Trochodendron aralioides HOM05D000922 ORTHO05D007418 1.0e-102 378.6 805 38.3
Gorai.008G296200 Gossypium raimondii HOM05D000922 ORTHO05D007418 2.3e-102 377.5 733 40.7
Sabra15G0102900 Salix brachista HOM05D000922 ORTHO05D007418 8.9e-102 375.6 775 37.9
Sp5g13830 Schrenkiella parvula HOM05D000922 ORTHO05D007418 2.0e-101 374.4 695 38.8
Sabra12G0059200 Salix brachista HOM05D000922 ORTHO05D007418 3.4e-101 373.6 751 40.2
Thhalv10010097m.g Eutrema salsugineum HOM05D000922 ORTHO05D007418 8.3e-100 369.0 713 40.0
CSS0017974 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D007418 1.4e-99 368.2 822 37.6
BcaB05g22925 Brassica carinata HOM05D000922 ORTHO05D007418 3.2e-99 367.1 693 37.5
ClCG06G017060 Citrullus lanatus HOM05D000922 ORTHO05D007418 5.4e-99 366.3 798 36.6
COL.COLO4_30068 Corchorus olitorius HOM05D000922 ORTHO05D007418 5.4e-99 366.3 731 38.2
Carub.0005s1432 Capsella rubella HOM05D000922 ORTHO05D007418 2.7e-98 364.0 720 39.2
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.0e-97 362.1 810 36.9
QL10p011002 Quercus lobata HOM05D000922 ORTHO05D007418 1.7e-97 361.3 736 38.3
Aa31LG4G16800 Aethionema arabicum HOM05D000922 ORTHO05D007418 1.9e-96 357.8 699 38.8
PGR083G1532 Punica granatum HOM05D000922 ORTHO05D007418 4.3e-96 356.7 756 38.6
Eucgr.B00297 Eucalyptus grandis HOM05D000922 ORTHO05D007418 5.6e-96 356.3 741 36.8
AL5G27540 Arabidopsis lyrata HOM05D000922 ORTHO05D007418 9.5e-96 355.5 730 38.9
CARHR156940 Cardamine hirsuta HOM05D000922 ORTHO05D007418 4.4e-93 346.7 713 38.3
FAN04G3074 Fragaria x ananassa HOM05D000922 ORTHO05D007418 4.4e-93 346.7 636 39.5
Actinidia19330 Actinidia chinensis HOM05D000922 ORTHO05D007418 7.5e-93 345.9 790 37.1
CANSAT80G2096 Cannabis sativa HOM05D000922 ORTHO05D007418 7.5e-93 345.9 814 34.5
MELO3C017091.2 Cucumis melo HOM05D000922 ORTHO05D007418 1.7e-92 344.7 781 36.6
Dinv38573 Davidia involucrata HOM05D000922 ORTHO05D007418 2.2e-92 344.4 575 39.1
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 4.9e-92 343.2 792 36.7
Lj9A446G57 Lonicera japonica HOM05D000922 ORTHO05D007418 1.4e-91 341.7 706 37.7
CsaV3_1G001450 Cucumis sativus L. HOM05D000922 ORTHO05D007418 5.4e-91 339.7 769 36.5
AT3G48195 Arabidopsis thaliana HOM05D000922 ORTHO05D007418 9.2e-91 339.0 677 38.6
Sed0021678 Sechium edule HOM05D000922 ORTHO05D007418 1.0e-89 335.5 756 36.6
Hma1.2p1_2165F.1_g315780 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 1.1e-88 332.0 524 41.8
PSO017G6576 Papaver somniferum HOM05D000922 ORTHO05D007418 6.2e-87 326.2 753 35.6
C01p31950 Brassica napus HOM05D000922 ORTHO05D007418 1.8e-86 324.7 684 36.7
BolC1t03155H Brassica oleracea HOM05D000922 ORTHO05D007418 3.1e-86 323.9 685 36.8
PSO478G1387 Papaver somniferum HOM05D000922 ORTHO05D007418 1.2e-85 322.0 743 36.6
DCAR_016480 Daucus carota HOM05D000922 ORTHO05D007418 1.5e-85 321.6 764 35.5
BcaC09g49852 Brassica carinata HOM05D000922 ORTHO05D007418 9.9e-85 318.9 690 36.5
Hund02754 Selenicereus undatus HOM05D000922 ORTHO05D007418 1.7e-84 318.2 734 34.2
Sc04g0001750 Simmondsia chinensis HOM05D000922 ORTHO05D007418 8.3e-84 315.8 727 34.8
Cc04_g12110 Coffea canephora HOM05D000922 ORTHO05D007418 1.2e-82 312.0 688 36.0
arahy.Tifrunner.gnm1.ann1.9TFG5W Arachis hypogaea HOM05D000922 ORTHO05D007418 2.1e-82 311.2 787 34.6
Ca_16166_v3 Cicer arietinum L. HOM05D000922 ORTHO05D007418 1.0e-81 308.9 734 36.2
Nn4g22714 Nelumbo nucifera HOM05D000922 ORTHO05D007418 2.3e-81 307.8 807 32.7
Aqoxy3G02884 Aquilegia oxysepala HOM05D000922 ORTHO05D007418 3.9e-81 307.0 778 34.1
BraA01t02462Z Brassica rapa HOM05D000922 ORTHO05D007418 1.5e-80 305.1 672 36.6
arahy.Tifrunner.gnm1.ann1.F0ZNJX Arachis hypogaea HOM05D000922 ORTHO05D007418 5.6e-80 303.1 775 34.7
Lsat_1_v5_gn_5_15041 Lactuca sativa HOM05D000922 ORTHO05D007418 1.4e-78 298.5 688 35.2
AUR62008194 Chenopodium quinoa HOM05D000922 ORTHO05D007418 2.4e-78 297.7 729 34.6
MSTRG.23139 Avicennia marina HOM05D000922 ORTHO05D007418 2.0e-77 294.7 740 35.4
Oeu016401.1 Olea europaea HOM05D000922 ORTHO05D007418 6.4e-76 289.7 748 34.8
Psat0ss3962g0400 Pisum sativum HOM05D000922 ORTHO05D007418 4.2e-75 287.0 732 33.7
SalBow5G3118 Salvia bowleyana HOM05D000922 ORTHO05D007418 1.6e-74 285.0 709 33.1
A01p25510 Brassica napus HOM05D000922 ORTHO05D007418 4.6e-74 283.5 667 34.9
Peaxi162Scf00255g01019 Petunia axillaris HOM05D000922 ORTHO05D007418 1.0e-73 282.3 797 34.1
VMungo1309G1607 Vigna mungo HOM05D000922 ORTHO05D007418 1.3e-73 282.0 715 33.1
Migut.O00098 Erythranthe guttata HOM05D000922 ORTHO05D007418 3.9e-73 280.4 727 33.4
Nitab4.5_0000025g0520 Nicotiana tabacum HOM05D000922 ORTHO05D007418 1.5e-72 278.5 778 33.4
Sopen03g031910 Solanum pennellii HOM05D000922 ORTHO05D007418 3.3e-72 277.3 562 35.9
Nitab4.5_0001514g0050 Nicotiana tabacum HOM05D000922 ORTHO05D007418 5.6e-72 276.6 783 33.5
Phvul.009G177300 Phaseolus vulgaris HOM05D000922 ORTHO05D007418 9.6e-72 275.8 729 32.1
SalBow5G1735 Salvia bowleyana HOM05D000922 ORTHO05D007418 9.6e-72 275.8 734 32.8
AUR62030946 Chenopodium quinoa HOM05D000922 ORTHO05D007418 1.3e-71 275.4 731 33.0
CAN.G1166.3 Capsicum annuum HOM05D000922 ORTHO05D007418 1.1e-70 272.3 586 35.8
Glyma.04G184600 Glycine max HOM05D000922 ORTHO05D007418 1.8e-70 271.6 748 33.7
TPR.G20687 Trifolium pratense HOM05D000922 ORTHO05D007418 4.0e-70 270.4 757 32.6
HanXRQChr05g0155771 Helianthus annuus HOM05D000922 ORTHO05D007418 9.0e-70 269.2 680 34.0
Lj1g0015886 Lotus japonicus HOM05D000922 ORTHO05D007418 9.0e-70 269.2 747 33.9
Glyma.06G181100 Glycine max HOM05D000922 ORTHO05D007418 1.2e-69 268.9 727 34.4
Ah.02g110580 Amaranthus hybridus HOM05D000922 ORTHO05D007418 1.5e-69 268.5 778 31.6
ECA246G0682 Erigeron canadensis HOM05D000922 ORTHO05D007418 1.5e-69 268.5 650 34.6
SGA_v2.0_scaffold90G27900 Striga asiatica HOM05D000922 ORTHO05D007418 1.5e-69 268.5 686 33.7
EL10Ac5g10730 Beta vulgaris HOM05D000922 ORTHO05D007418 3.4e-69 267.3 764 33.1
Actinidia33077 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.3e-68 265.4 213 64.3
vmacro19399 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 2.2e-68 264.6 210 63.3
Medtr3g077620 Medicago truncatula HOM05D000922 ORTHO05D007418 1.2e-66 258.8 741 33.3
unitig_26.g9619 Utricularia gibba HOM05D000922 ORTHO05D007418 1.7e-65 255.0 707 32.7
Peaxi162Scf00089g01840 Petunia axillaris HOM05D000922 ORTHO05D007418 2.3e-65 254.6 503 36.8
ATR1091G081 Amborella trichopoda HOM05D000922 ORTHO05D007418 1.1e-64 252.3 750 32.9
HPP92_009707 Vanilla planifolia HOM05D000922 ORTHO05D007418 2.8e-63 247.7 719 33.9
Lalb_Chr23g0273281 Lupinus albus HOM05D000922 ORTHO05D007418 4.6e-58 230.3 232 54.3
CDE06G1806 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 5.8e-53 213.4 760 31.4
Solyc03g112830.4 Solanum lycopersicum HOM05D000922 ORTHO05D007418 7.1e-51 206.5 564 31.7
SHI17077 Sapria himalayana HOM05D000922 ORTHO05D007418 2.2e-44 184.9 188 50.5
Os01g0549500 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D007418 1.9e-43 181.8 192 49.0
Zm00001eb162380 Zea mays HOM05D000922 ORTHO05D007418 3.5e-42 177.6 181 50.8
SEGI_24933 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 3.1e-38 164.5 186 51.6
SEGI_19196 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 2.6e-37 161.4 177 50.3
SMO367G0209 Selaginella moellendorffii HOM05D000922 ORTHO05D007418 5.7e-32 143.7 218 39.9
Mapoly0023s0026 Marchantia polymorpha HOM05D000922 ORTHO05D007418 1.7e-31 142.1 183 46.4
Pp3c26_1280 Physcomitrium patens HOM05D000922 ORTHO05D007418 2.0e-29 135.2 184 45.1
vmacro19400 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 6.5e-20 103.6 451 29.3
CDE07G0520 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 1.2e-18 99.4 114 50.9
Lalb_Chr23g0273291 Lupinus albus HOM05D000922 ORTHO05D007418 6.7e-17 93.6 585 26.7
Dinv20638 Davidia involucrata HOM05D000922 ORTHO05D007418 2.2e-12 78.6 150 32.7
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 2.2e-12 78.6 102 53.9
FAN04G1664 Fragaria x ananassa HOM05D000922 ORTHO05D007418 5.4e-06 57.4 161 36.6


User provided reference genes

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