Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc29.179 Carica papaya HOM05D006567 ORTHO05D009430 1.0e-218 763.1 375 100.0
Thecc.03G249000 Theobroma cacao HOM05D006567 ORTHO05D009430 1.1e-183 646.7 365 84.9
Duzib084G0744 Durio zibethinus HOM05D006567 ORTHO05D009430 3.1e-183 645.2 365 84.4
COL.COLO4_37145 Corchorus olitorius HOM05D006567 ORTHO05D009430 1.5e-182 642.9 360 85.8
MD04G1062400 Malus domestica HOM05D006567 ORTHO05D009430 1.0e-181 640.2 368 83.7
Gorai.008G234200 Gossypium raimondii HOM05D006567 ORTHO05D009430 1.7e-181 639.4 370 83.5
Gohir.D12G218600 Gossypium hirsutum HOM05D006567 ORTHO05D009430 5.0e-181 637.9 370 83.0
RcHm_v2.0_Chr7g0203711 Rosa chinensis HOM05D006567 ORTHO05D009430 6.5e-181 637.5 367 82.6
QL12p011664 Quercus lobata HOM05D006567 ORTHO05D009430 8.5e-181 637.1 365 84.1
TAR636G1533 Trochodendron aralioides HOM05D006567 ORTHO05D009430 1.4e-180 636.3 365 83.0
TWI81G0123 Tripterygium wilfordii HOM05D006567 ORTHO05D009430 1.9e-180 636.0 366 83.6
Lj4g0021343 Lotus japonicus HOM05D006567 ORTHO05D009430 5.5e-180 634.4 365 83.6
Sabra03G0048700 Salix brachista HOM05D006567 ORTHO05D009430 5.5e-180 634.4 371 81.4
Glyma.05G061300 Glycine max HOM05D006567 ORTHO05D009430 9.4e-180 633.6 363 83.7
Gohir.A12G216000 Gossypium hirsutum HOM05D006567 ORTHO05D009430 9.4e-180 633.6 376 81.9
CSS0024870 Camellia sinensis var. sinensis HOM05D006567 ORTHO05D009430 1.2e-179 633.3 362 83.4
Cfa015824 Carpinus fangiana HOM05D006567 ORTHO05D009430 4.6e-179 631.3 367 82.6
VMungo0251G1330 Vigna mungo HOM05D006567 ORTHO05D009430 4.6e-179 631.3 363 82.4
Actinidia14413 Actinidia chinensis HOM05D006567 ORTHO05D009430 6.1e-179 630.9 363 82.9
Atru.chr9.1289 Acer truncatum HOM05D006567 ORTHO05D009430 1.4e-178 629.8 362 83.4
TPR.G37608 Trifolium pratense HOM05D006567 ORTHO05D009430 1.8e-178 629.4 365 82.5
vmacro00188 Vaccinium macrocarpon HOM05D006567 ORTHO05D009430 3.0e-178 628.6 365 82.7
Psat4g072680 Pisum sativum HOM05D006567 ORTHO05D009430 1.1e-177 626.7 365 83.0
arahy.Tifrunner.gnm1.ann1.69E4XE Arachis hypogaea HOM05D006567 ORTHO05D009430 3.3e-177 625.2 361 82.8
Lalb_Chr05g0221201 Lupinus albus HOM05D006567 ORTHO05D009430 3.3e-177 625.2 362 82.6
Medtr4g100760 Medicago truncatula HOM05D006567 ORTHO05D009430 4.3e-177 624.8 370 81.9
Ca_21975_v3 Cicer arietinum L. HOM05D006567 ORTHO05D009430 5.7e-177 624.4 367 83.1
arahy.Tifrunner.gnm1.ann1.E0WBQ7 Arachis hypogaea HOM05D006567 ORTHO05D009430 7.4e-177 624.0 361 82.5
Hund11604 Selenicereus undatus HOM05D006567 ORTHO05D009430 7.4e-177 624.0 368 80.2
FAN18G0654 Fragaria x ananassa HOM05D006567 ORTHO05D009430 9.7e-177 623.6 363 80.4
FAN08G1209 Fragaria x ananassa HOM05D006567 ORTHO05D009430 1.3e-176 623.2 365 80.3
Aqoxy7G00822 Aquilegia oxysepala HOM05D006567 ORTHO05D009430 2.8e-176 622.1 363 81.5
FAN04G2727 Fragaria x ananassa HOM05D006567 ORTHO05D009430 2.8e-176 622.1 365 80.5
Potri.003G078500 Populus trichocarpa HOM05D006567 ORTHO05D009430 2.8e-176 622.1 373 79.4
PGR031G0713 Punica granatum HOM05D006567 ORTHO05D009430 4.8e-176 621.3 365 82.5
Phvul.003G221900 Phaseolus vulgaris HOM05D006567 ORTHO05D009430 1.1e-175 620.2 363 81.3
CANSAT21G0369 Cannabis sativa HOM05D006567 ORTHO05D009430 1.4e-175 619.8 367 80.4
Peaxi162Scf00209g00122 Petunia axillaris HOM05D006567 ORTHO05D009430 1.8e-175 619.4 365 81.4
Cc08_g12240 Coffea canephora HOM05D006567 ORTHO05D009430 3.1e-175 618.6 364 80.8
Ciclev10020637m.g Citrus clementina HOM05D006567 ORTHO05D009430 5.3e-175 617.8 370 80.3
HanXRQChr13g0417851 Helianthus annuus HOM05D006567 ORTHO05D009430 3.8e-173 611.7 361 79.2
Eucgr.D02095 Eucalyptus grandis HOM05D006567 ORTHO05D009430 5.0e-173 611.3 360 81.7
MELO3C005521.2 Cucumis melo HOM05D006567 ORTHO05D009430 6.5e-173 610.9 363 80.4
MSTRG.12113 Avicennia marina HOM05D006567 ORTHO05D009430 1.1e-172 610.1 361 80.3
CsaV3_5G004320 Cucumis sativus L. HOM05D006567 ORTHO05D009430 1.1e-172 610.1 365 80.0
MBI04_g09522_MAGBIO Magnolia biondii HOM05D006567 ORTHO05D009430 1.1e-172 610.1 366 78.1
PGSC0003DMG400004822 Solanum tuberosum HOM05D006567 ORTHO05D009430 1.1e-172 610.1 365 80.3
SalBow6G6157 Salvia bowleyana HOM05D006567 ORTHO05D009430 1.4e-172 609.8 360 79.2
CAN.G1178.26 Capsicum annuum HOM05D006567 ORTHO05D009430 1.9e-172 609.4 366 79.5
DCAR_004966 Daucus carota HOM05D006567 ORTHO05D009430 9.4e-172 607.1 366 79.8
Nn1g00949 Nelumbo nucifera HOM05D006567 ORTHO05D009430 1.2e-171 606.7 361 80.1
Solyc08g078460.3 Solanum lycopersicum HOM05D006567 ORTHO05D009430 2.1e-171 605.9 365 79.7
Sopen08g026950 Solanum pennellii HOM05D006567 ORTHO05D009430 2.1e-171 605.9 365 79.7
ECA240G4587 Erigeron canadensis HOM05D006567 ORTHO05D009430 3.6e-171 605.1 368 76.6
CARHR223980 Cardamine hirsuta HOM05D006567 ORTHO05D009430 7.9e-171 604.0 362 79.0
Migut.A01121 Erythranthe guttata HOM05D006567 ORTHO05D009430 7.9e-171 604.0 361 79.8
AT4G17370 Arabidopsis thaliana HOM05D006567 ORTHO05D009430 2.0e-169 599.4 362 79.0
Lsat_1_v5_gn_6_92541 Lactuca sativa HOM05D006567 ORTHO05D009430 2.6e-169 599.0 361 78.1
Thhalv10025513m.g Eutrema salsugineum HOM05D006567 ORTHO05D009430 4.4e-169 598.2 362 78.2
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 5.7e-169 597.8 363 78.5
BcaNung03466 Brassica carinata HOM05D006567 ORTHO05D009430 9.7e-169 597.0 365 78.1
Carub.0007s2404 Capsella rubella HOM05D006567 ORTHO05D009430 9.7e-169 597.0 362 78.5
Haze_00669 Corylus avellana HOM05D006567 ORTHO05D009430 3.7e-168 595.1 398 74.9
BolC7t45378H Brassica oleracea HOM05D006567 ORTHO05D009430 3.1e-167 592.0 365 77.5
AL7G37340 Arabidopsis lyrata HOM05D006567 ORTHO05D009430 7.0e-167 590.9 377 75.6
A03p50390 Brassica napus HOM05D006567 ORTHO05D009430 7.0e-167 590.9 363 77.4
Sp7g16810 Schrenkiella parvula HOM05D006567 ORTHO05D009430 7.0e-167 590.9 362 77.6
ClCG01G004160 Citrullus lanatus HOM05D006567 ORTHO05D009430 3.5e-166 588.6 374 75.9
Nitab4.5_0001381g0120 Nicotiana tabacum HOM05D006567 ORTHO05D009430 4.5e-166 588.2 364 79.1
EL10Ac5g12369 Beta vulgaris HOM05D006567 ORTHO05D009430 5.9e-166 587.8 360 78.6
EL10Ac5g12374 Beta vulgaris HOM05D006567 ORTHO05D009430 7.7e-166 587.4 360 78.6
BraA03t14129Z Brassica rapa HOM05D006567 ORTHO05D009430 3.8e-165 585.1 363 76.9
AUR62019967 Chenopodium quinoa HOM05D006567 ORTHO05D009430 4.2e-164 581.6 354 78.2
HPP92_025881 Vanilla planifolia HOM05D006567 ORTHO05D009430 7.2e-164 580.9 368 76.1
THA.LOC104806666 Tarenaya hassleriana HOM05D006567 ORTHO05D009430 9.4e-164 580.5 365 76.7
Aa31LG1G23140 Aethionema arabicum HOM05D006567 ORTHO05D009430 1.8e-162 576.2 359 76.6
PSO170G1323 Papaver somniferum HOM05D006567 ORTHO05D009430 3.0e-162 575.5 380 72.9
Nitab4.5_0002289g0070 Nicotiana tabacum HOM05D006567 ORTHO05D009430 1.3e-160 570.1 363 77.4
PSO017G4082 Papaver somniferum HOM05D006567 ORTHO05D009430 1.3e-160 570.1 378 72.5
SGA_v2.0_scaffold26G11306 Striga asiatica HOM05D006567 ORTHO05D009430 2.4e-159 565.8 375 72.0
ATR0057G105 Amborella trichopoda HOM05D006567 ORTHO05D009430 4.1e-159 565.1 361 73.7
AUR62007104 Chenopodium quinoa HOM05D006567 ORTHO05D009430 2.4e-151 539.3 357 73.1
unitig_899.g15594 Utricularia gibba HOM05D006567 ORTHO05D009430 2.7e-150 535.8 360 71.7
SEGI_34288 Sequoiadendron giganteum HOM05D006567 ORTHO05D009430 1.8e-146 523.1 361 69.8
CiPaw.11G081200 Carya illinoinensis HOM05D006567 ORTHO05D009430 9.1e-143 510.8 298 82.9
Os08g0148267 Oryza sativa ssp. japonica HOM05D006567 ORTHO05D009430 1.0e-141 507.3 305 80.0
Prupe.5G066000 Prunus persica HOM05D006567 ORTHO05D009430 1.1e-140 503.8 272 86.0
Manes.01G082300 Manihot esculenta HOM05D006567 ORTHO05D009430 2.8e-139 499.2 282 85.8
AagrBONN_evm.TU.Sc2ySwM_228.3639 Anthoceros agrestis HOM05D006567 ORTHO05D009430 1.7e-136 490.0 367 64.0
Dinv39160 Davidia involucrata HOM05D006567 ORTHO05D009430 1.1e-135 487.3 287 81.9
SMO228G0171 Selaginella moellendorffii HOM05D006567 ORTHO05D009430 2.4e-135 486.1 363 65.3
Pp3c4_15440 Physcomitrium patens HOM05D006567 ORTHO05D009430 4.3e-132 475.3 376 62.5
Sed0022818 Sechium edule HOM05D006567 ORTHO05D009430 9.5e-132 474.2 274 81.4
Mapoly0040s0044 Marchantia polymorpha HOM05D006567 ORTHO05D009430 2.8e-131 472.6 363 63.6
Zm00001eb416490 Zea mays HOM05D006567 ORTHO05D009430 7.5e-121 438.0 305 70.8
Rhsim09G0000200 Rhododendron simsii HOM05D006567 ORTHO05D009430 1.9e-111 406.8 410 53.2
Lj2C221T14 Lonicera japonica HOM05D006567 ORTHO05D009430 2.4e-111 406.4 241 81.3
FvH4_5g19170 Fragaria vesca HOM05D006567 ORTHO05D009430 5.4e-111 405.2 222 82.9
Sc07g0009260 Simmondsia chinensis HOM05D006567 ORTHO05D009430 7.3e-108 394.8 223 81.6
GSVIVG01004725001 Vitis vinifera HOM05D006567 ORTHO05D009430 6.2e-107 391.7 227 82.8
Glyma.17G143100 Glycine max HOM05D006567 ORTHO05D009430 3.7e-83 312.8 184 79.3
BcaC06g33541 Brassica carinata HOM05D006567 ORTHO05D009430 1.9e-68 263.8 209 65.1
QL08p052096 Quercus lobata HOM05D006567 ORTHO05D015939 1.1e-50 204.9 117 79.5
QL08p055973 Quercus lobata HOM05D006567 ORTHO05D015939 7.0e-50 202.2 127 74.0
FvH4_5g07380 Fragaria vesca HOM05D006567 ORTHO05D015939 3.5e-49 199.9 118 77.1
FvH4_3g36620 Fragaria vesca HOM05D006567 ORTHO05D015939 5.5e-47 192.6 115 79.1
FAN04G0922 Fragaria x ananassa HOM05D006567 ORTHO05D015939 1.6e-46 191.0 120 75.0
FAN09G0929 Fragaria x ananassa HOM05D006567 ORTHO05D015939 4.7e-46 189.5 119 74.8
FAN22G0783 Fragaria x ananassa HOM05D006567 ORTHO05D015939 4.7e-46 189.5 119 74.8
FAN27G0484 Fragaria x ananassa HOM05D006567 ORTHO05D015939 5.7e-44 182.6 120 73.3
BcaC06g33542 Brassica carinata HOM05D006567 ORTHO05D015939 1.7e-35 154.5 96 72.9
Rhsim09G0000100 Rhododendron simsii HOM05D006567 ORTHO05D009430 1.6e-30 137.9 95 74.7
FAN28G1973 Fragaria x ananassa HOM05D006567 ORTHO05D015939 3.5e-17 93.6 57 71.9
TPR.G24425 Trifolium pratense HOM05D006567 ORTHO05D411483 3.4e-12 77.0 54 70.4
TPR.G40300 Trifolium pratense HOM05D006567 ORTHO05D412752 5.8e-12 76.3 54 68.5
TPR.G2696 Trifolium pratense HOM05D006567 ORTHO05D411767 1.3e-11 75.1 54 68.5
TPR.G2679 Trifolium pratense HOM05D006567 ORTHO05D412848 3.2e-10 70.5 54 64.8
Pp3s34_460 Physcomitrium patens HOM05D001684 ORTHO05D018939 7.0e-10 69.3 281 26.3
Pp3s96_60 Physcomitrium patens HOM05D016182 ORTHO05D028865 7.0e-10 69.3 215 28.4
AL7G37260 Arabidopsis lyrata HOM05D006567 ORTHO05D015939 3.5e-09 67.0 43 69.8
EL10Ac4g09527 Beta vulgaris HOM05D006567 ORTHO05D010541 1.5e-07 61.6 63 52.4
Ca_29050_v3 Cicer arietinum L. HOM05D006567 ORTHO05D018939 6.2e-06 56.2 211 26.1


User provided reference genes

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