Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc29.111 Carica papaya HOM05D007051 ORTHO05D008842 5.0e-79 297.7 153 100.0
QL12p014185 Quercus lobata HOM05D007051 ORTHO05D008842 4.3e-38 161.8 118 72.0
CiPaw.12G105800 Carya illinoinensis HOM05D007051 ORTHO05D008842 3.6e-37 158.7 120 72.5
Haze_08593 Corylus avellana HOM05D007051 ORTHO05D008842 3.6e-37 158.7 119 72.3
Ciclev10021945m.g Citrus clementina HOM05D007051 ORTHO05D008842 1.0e-36 157.1 118 70.3
Prupe.5G077000 Prunus persica HOM05D007051 ORTHO05D008842 1.0e-36 157.1 119 72.3
PGR031G0283 Punica granatum HOM05D007051 ORTHO05D008842 2.3e-36 156.0 118 68.6
Glyma.11G030400 Glycine max HOM05D007051 ORTHO05D008842 4.0e-36 155.2 119 68.1
GSVIVG01006029001 Vitis vinifera HOM05D007051 ORTHO05D008842 1.2e-35 153.7 117 69.2
Dinv21586 Davidia involucrata HOM05D007051 ORTHO05D008842 7.5e-35 151.0 118 70.3
Duzib205G0440 Durio zibethinus HOM05D007051 ORTHO05D008842 2.2e-34 149.4 121 71.1
FAN13G2377 Fragaria x ananassa HOM05D007051 ORTHO05D008842 2.9e-34 149.1 119 68.1
TAR629G3399 Trochodendron aralioides HOM05D007051 ORTHO05D008842 2.9e-34 149.1 118 68.6
CSS0034738 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 3.7e-34 148.7 120 65.8
FAN04G1713 Fragaria x ananassa HOM05D007051 ORTHO05D008842 3.7e-34 148.7 119 68.1
CSS0029957 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 6.4e-34 147.9 121 70.2
MSTRG.12072 Avicennia marina HOM05D007051 ORTHO05D008842 8.3e-34 147.5 117 70.1
Manes.01G074700 Manihot esculenta HOM05D007051 ORTHO05D008842 8.3e-34 147.5 119 69.7
Hma1.2p1_1868F.1_g305940 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 1.1e-33 147.1 120 66.7
Hma1.2p1_1868F.1_g305950 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 1.1e-33 147.1 120 66.7
MD04G1081100 Malus domestica HOM05D007051 ORTHO05D008842 1.1e-33 147.1 119 68.9
Ca_06694_v3 Cicer arietinum L. HOM05D007051 ORTHO05D008842 1.8e-33 146.4 129 62.8
AL2G13010 Arabidopsis lyrata HOM05D007051 ORTHO05D008842 2.4e-33 146.0 118 70.3
Gohir.A11G020000 Gossypium hirsutum HOM05D007051 ORTHO05D008842 3.2e-33 145.6 119 68.1
Lj2g0024450 Lotus japonicus HOM05D007051 ORTHO05D008842 3.2e-33 145.6 119 65.5
Oeu024055.1 Olea europaea HOM05D007051 ORTHO05D008842 3.2e-33 145.6 120 68.3
RcHm_v2.0_Chr7g0202061 Rosa chinensis HOM05D007051 ORTHO05D008842 3.2e-33 145.6 119 67.2
Aa31LG2G320 Aethionema arabicum HOM05D007051 ORTHO05D008842 4.1e-33 145.2 118 70.3
MELO3C005568.2 Cucumis melo HOM05D007051 ORTHO05D008842 4.1e-33 145.2 121 66.9
AT1G62780 Arabidopsis thaliana HOM05D007051 ORTHO05D008842 5.4e-33 144.8 118 69.5
Gohir.D11G019700 Gossypium hirsutum HOM05D007051 ORTHO05D008842 5.4e-33 144.8 119 68.1
Gorai.007G021000 Gossypium raimondii HOM05D007051 ORTHO05D008842 5.4e-33 144.8 119 68.1
Lsat_1_v5_gn_3_2541 Lactuca sativa HOM05D007051 ORTHO05D008842 5.4e-33 144.8 129 62.8
THA.LOC104809449 Tarenaya hassleriana HOM05D007051 ORTHO05D008842 5.4e-33 144.8 118 70.3
FAN08G0417 Fragaria x ananassa HOM05D007051 ORTHO05D008842 7.0e-33 144.4 119 66.4
FAN18G1307 Fragaria x ananassa HOM05D007051 ORTHO05D008842 7.0e-33 144.4 119 66.4
SalBow6G1069 Salvia bowleyana HOM05D007051 ORTHO05D008842 1.2e-32 143.7 100 75.0
Eucgr.D02017 Eucalyptus grandis HOM05D007051 ORTHO05D008842 2.0e-32 142.9 119 64.7
Thhalv10023664m.g Eutrema salsugineum HOM05D007051 ORTHO05D008842 2.0e-32 142.9 118 68.6
Atru.chr9.1399 Acer truncatum HOM05D007051 ORTHO05D008842 4.6e-32 141.7 117 65.0
Actinidia27438 Actinidia chinensis HOM05D007051 ORTHO05D008842 4.6e-32 141.7 117 67.5
arahy.Tifrunner.gnm1.ann1.2BY1CI Arachis hypogaea HOM05D007051 ORTHO05D008842 5.9e-32 141.4 132 62.1
Sc01g0009270 Simmondsia chinensis HOM05D007051 ORTHO05D008842 5.9e-32 141.4 119 68.1
Thecc.03G259200 Theobroma cacao HOM05D007051 ORTHO05D008842 5.9e-32 141.4 120 69.2
SGA_v2.0_scaffold120G32840 Striga asiatica HOM05D007051 ORTHO05D008842 7.8e-32 141.0 108 68.5
BcaC04g22447 Brassica carinata HOM05D007051 ORTHO05D008842 1.7e-31 139.8 118 67.8
C09p19230 Brassica napus HOM05D007051 ORTHO05D008842 1.7e-31 139.8 118 67.8
CANSAT21G0170 Cannabis sativa HOM05D007051 ORTHO05D008842 1.7e-31 139.8 119 65.5
ClCG01G003730 Citrullus lanatus HOM05D007051 ORTHO05D008842 1.7e-31 139.8 123 63.4
BcaB07g31359 Brassica carinata HOM05D007051 ORTHO05D008842 3.0e-31 139.0 118 67.8
A09p15970 Brassica napus HOM05D007051 ORTHO05D008842 3.0e-31 139.0 118 67.8
BraA09t37232Z Brassica rapa HOM05D007051 ORTHO05D008842 3.0e-31 139.0 118 67.8
CsaV3_5G003870 Cucumis sativus L. HOM05D007051 ORTHO05D008842 3.0e-31 139.0 121 64.5
Potri.001G119100 Populus trichocarpa HOM05D007051 ORTHO05D008842 3.9e-31 138.7 119 64.7
arahy.Tifrunner.gnm1.ann1.BK8PZK Arachis hypogaea HOM05D007051 ORTHO05D008842 5.0e-31 138.3 132 61.4
Sp2g01860 Schrenkiella parvula HOM05D007051 ORTHO05D008842 5.0e-31 138.3 118 66.1
TWI60G1677 Tripterygium wilfordii HOM05D007051 ORTHO05D008842 5.0e-31 138.3 118 65.3
ATR0665G189 Amborella trichopoda HOM05D007051 ORTHO05D008842 8.6e-31 137.5 107 64.5
Psat2g179120 Pisum sativum HOM05D007051 ORTHO05D008842 8.6e-31 137.5 119 61.3
EL10Ac5g12994 Beta vulgaris HOM05D007051 ORTHO05D008842 1.1e-30 137.1 120 64.2
BolC9t54830H Brassica oleracea HOM05D007051 ORTHO05D008842 1.9e-30 136.3 120 65.0
CARHR049060 Cardamine hirsuta HOM05D007051 ORTHO05D008842 1.9e-30 136.3 118 65.3
unitig_699.g19761 Utricularia gibba HOM05D001703 ORTHO05D007194 1.9e-30 136.3 89 77.5
Carub.0002s0220 Capsella rubella HOM05D007051 ORTHO05D008842 2.5e-30 136.0 109 70.6
Cc08_g13070 Coffea canephora HOM05D007051 ORTHO05D008842 2.5e-30 136.0 97 69.1
Migut.A00866 Erythranthe guttata HOM05D007051 ORTHO05D008842 3.3e-30 135.6 115 61.7
Sed0010491 Sechium edule HOM05D007051 ORTHO05D008842 4.3e-30 135.2 118 61.0
VMungo1215G1548 Vigna mungo HOM05D007051 ORTHO05D008842 7.3e-30 134.4 119 62.2
CDE02G0603 Ceratophyllum demersum HOM05D007051 ORTHO05D008842 1.6e-29 133.3 118 65.3
Sabra01G0092000 Salix brachista HOM05D007051 ORTHO05D008842 2.1e-29 132.9 119 63.0
Nitab4.5_0004482g0060 Nicotiana tabacum HOM05D007051 ORTHO05D008842 3.6e-29 132.1 121 64.5
PSO675G3044 Papaver somniferum HOM05D007051 ORTHO05D008842 6.2e-29 131.3 110 63.6
DCAR_006807 Daucus carota HOM05D007051 ORTHO05D008842 8.0e-29 131.0 118 58.5
Os04g0105700 Oryza sativa ssp. japonica HOM05D007051 ORTHO05D008842 8.0e-29 131.0 101 68.3
PSO717G0094 Papaver somniferum HOM05D007051 ORTHO05D008842 1.0e-28 130.6 110 63.6
Medtr5g011990 Medicago truncatula HOM05D007051 ORTHO05D008842 1.4e-28 130.2 128 60.2
Solyc08g079240.4 Solanum lycopersicum HOM05D007051 ORTHO05D008842 1.4e-28 130.2 123 61.8
Zm00001eb300480 Zea mays HOM05D007051 ORTHO05D008842 1.8e-28 129.8 104 68.3
Sopen08g027680 Solanum pennellii HOM05D007051 ORTHO05D008842 3.1e-28 129.0 123 61.0
Phvul.002G060700 Phaseolus vulgaris HOM05D007051 ORTHO05D008842 4.0e-28 128.6 119 60.5
vmacro14055 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 4.0e-28 128.6 84 76.2
Hund11573 Selenicereus undatus HOM05D007051 ORTHO05D008842 6.8e-28 127.9 129 59.7
Nitab4.5_0010733g0020 Nicotiana tabacum HOM05D007051 ORTHO05D008842 8.9e-28 127.5 117 64.1
Nn6g34078 Nelumbo nucifera HOM05D007051 ORTHO05D008842 1.2e-27 127.1 91 72.5
PGSC0003DMG400004734 Solanum tuberosum HOM05D007051 ORTHO05D008842 1.2e-27 127.1 100 69.0
CAN.G1337.17 Capsicum annuum HOM05D007051 ORTHO05D008842 1.5e-27 126.7 125 63.2
AUR62007459 Chenopodium quinoa HOM05D007051 ORTHO05D008842 1.5e-27 126.7 132 54.5
Peaxi162Scf00002g00416 Petunia axillaris HOM05D007051 ORTHO05D008842 1.5e-27 126.7 91 73.6
AUR62039918 Chenopodium quinoa HOM05D007051 ORTHO05D008842 3.4e-27 125.6 119 59.7
Lalb_Chr09g0324461 Lupinus albus HOM05D007051 ORTHO05D008842 6.4e-26 121.3 134 53.0
MBI04_g42034_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 1.4e-25 120.2 118 59.3
FvH4_5g00440 Fragaria vesca HOM05D007051 ORTHO05D008842 4.6e-24 115.2 80 75.0
MBI04_g32270_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 1.0e-23 114.0 84 70.2
HanXRQChr17g0549011 Helianthus annuus HOM05D007051 ORTHO05D008842 8.6e-23 110.9 119 55.5
HPP92_015062 Vanilla planifolia HOM05D007051 ORTHO05D008842 6.2e-21 104.8 109 51.4
Aqoxy7G00687 Aquilegia oxysepala HOM05D007051 ORTHO05D008842 1.1e-20 104.0 118 54.2
ECA246G0398 Erigeron canadensis HOM05D007051 ORTHO05D008842 1.1e-20 104.0 112 52.7
Pp3c10_11840 Physcomitrium patens HOM05D007051 ORTHO05D008842 9.8e-19 97.4 110 49.1
AagrBONN_evm.TU.Sc2ySwM_362.1892 Anthoceros agrestis HOM05D007051 ORTHO05D008842 3.7e-18 95.5 98 53.1
SEGI_34604 Sequoiadendron giganteum HOM05D007051 ORTHO05D008842 4.6e-16 88.6 125 45.6
SMO367G0716 Selaginella moellendorffii HOM05D007051 ORTHO05D008842 3.6e-13 79.0 98 41.8
TPR.G820 Trifolium pratense HOM05D007051 ORTHO05D008842 5.4e-09 65.1 135 45.9
Mapoly0062s0102 Marchantia polymorpha HOM05D007051 ORTHO05D008842 7.8e-08 61.2 115 35.7
Cre13.g579550 Chlamydomonas reinhardtii HOM05D007051 ORTHO05D008842 2.5e-06 56.2 140 30.0


User provided reference genes

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