Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 4.0e-176 621.3 312 100.0
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 1.5e-143 513.1 304 85.5
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 1.5e-143 513.1 316 82.6
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 2.9e-142 508.8 304 82.9
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 6.4e-142 507.7 302 83.4
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 1.4e-141 506.5 304 83.6
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 7.1e-141 504.2 302 83.1
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 9.3e-141 503.8 302 81.8
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 1.6e-140 503.1 306 82.4
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 2.7e-140 502.3 302 82.8
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 1.8e-139 499.6 302 82.8
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 2.3e-139 499.2 302 81.5
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 2.3e-139 499.2 302 83.1
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 8.7e-139 497.3 302 82.1
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 1.1e-138 496.9 304 82.6
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 3.3e-138 495.4 302 81.8
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 5.6e-138 494.6 302 82.1
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 1.6e-137 493.0 304 81.6
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 2.1e-137 492.7 304 81.2
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 2.8e-137 492.3 304 79.9
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 1.1e-136 490.3 304 81.2
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 1.4e-136 490.0 307 80.5
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 3.1e-136 488.8 302 80.5
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 1.5e-135 486.5 304 79.3
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 2.0e-135 486.1 304 78.3
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 2.6e-135 485.7 304 78.9
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 3.4e-135 485.3 299 81.3
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 5.8e-135 484.6 299 81.3
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 1.3e-134 483.4 304 78.6
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 2.9e-134 482.3 306 80.1
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 3.8e-134 481.9 301 78.7
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 3.8e-134 481.9 304 78.6
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 4.9e-134 481.5 304 78.9
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 4.9e-134 481.5 304 78.6
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 4.9e-134 481.5 304 79.3
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 4.9e-134 481.5 304 79.3
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 6.5e-134 481.1 304 80.3
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 6.5e-134 481.1 304 79.6
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 8.4e-134 480.7 297 80.5
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.1e-133 480.3 302 80.5
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 2.5e-133 479.2 299 79.3
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 2.5e-133 479.2 299 79.3
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 2.5e-133 479.2 299 79.6
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 2.5e-133 479.2 299 80.3
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 3.2e-133 478.8 299 79.3
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 5.5e-133 478.0 299 80.3
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 1.2e-132 476.9 304 78.6
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 1.6e-132 476.5 315 74.9
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 1.6e-132 476.5 299 79.3
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 2.1e-132 476.1 284 83.8
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 7.9e-132 474.2 304 77.6
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 1.0e-131 473.8 299 79.3
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 1.3e-131 473.4 299 77.3
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 2.3e-131 472.6 298 77.9
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 3.0e-131 472.2 304 77.3
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 3.0e-131 472.2 304 77.3
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 5.1e-131 471.5 301 77.7
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 5.1e-131 471.5 304 77.0
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 6.7e-131 471.1 306 76.8
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 6.7e-131 471.1 306 76.8
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 1.5e-130 469.9 306 76.5
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 1.5e-130 469.9 298 78.5
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 1.9e-130 469.5 304 77.0
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 2.5e-130 469.2 304 78.0
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 3.3e-130 468.8 306 76.5
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 4.3e-130 468.4 306 76.5
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 4.3e-130 468.4 306 76.1
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 5.7e-130 468.0 305 76.7
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 1.6e-129 466.5 302 77.5
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 2.1e-129 466.1 302 76.5
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 3.1e-128 462.2 298 77.2
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 3.1e-128 462.2 307 77.2
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 4.1e-128 461.8 304 77.0
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 5.3e-128 461.5 305 76.7
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 9.0e-128 460.7 298 77.5
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 3.4e-127 458.8 302 76.8
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 3.4e-127 458.8 302 76.8
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 2.9e-126 455.7 307 74.9
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 7.2e-125 451.1 304 74.7
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 7.2e-125 451.1 299 76.6
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 1.8e-123 446.4 304 73.4
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 1.6e-121 439.9 283 79.5
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 6.1e-116 421.4 294 70.7
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 3.9e-115 418.7 302 68.5
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 8.8e-115 417.5 304 70.7
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 2.0e-114 416.4 299 70.2
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 1.4e-112 410.2 262 80.2
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 5.9e-111 404.8 304 67.8
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 8.5e-110 401.0 300 67.7
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 1.6e-108 396.7 273 72.2
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 6.1e-108 394.8 247 82.2
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 4.5e-103 378.6 266 72.6
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 2.8e-97 359.4 306 60.1
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 3.1e-96 355.9 242 72.3
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 4.4e-90 335.5 230 73.0
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 7.5e-90 334.7 295 62.4
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 8.3e-89 331.3 291 59.1
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 1.4e-88 330.5 220 75.0
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 4.1e-88 328.9 264 64.4
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 4.5e-87 325.5 255 66.3
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 2.9e-86 322.8 299 55.5
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 2.5e-85 319.7 298 55.0
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.0e-83 312.8 196 79.6
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 4.9e-81 305.4 302 57.0
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 3.3e-77 292.7 297 52.5
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 3.7e-73 279.3 195 70.3
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 1.0e-67 261.2 314 44.9
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 2.0e-66 256.9 215 63.7
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 8.9e-59 231.5 303 48.5
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.4e-56 223.4 143 77.6
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.2e-55 221.1 144 78.5
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.5e-53 213.4 144 75.0
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 6.4e-49 198.7 144 72.9
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 8.4e-49 198.4 317 38.8
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 4.0e-43 179.5 166 51.8
Thhalv10022385m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 8.4e-41 171.8 123 69.9
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 1.0e-38 164.9 357 32.2
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 2.3e-38 163.7 268 44.0
CSS0020508 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 4.3e-37 159.5 91 81.3
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 2.6e-34 150.2 305 33.4
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 7.9e-31 138.7 339 29.8
MBI05_g43359_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 4.5e-26 122.9 80 76.2
MBI05_g43358_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 8.7e-14 82.0 43 86.0


User provided reference genes

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