Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc29.103 Carica papaya HOM05D005835 ORTHO05D007187 2.5e-98 362.1 181 100.0
Duzib068G0435 Durio zibethinus HOM05D005835 ORTHO05D007187 5.5e-61 238.0 181 65.2
Haze_08597 Corylus avellana HOM05D005835 ORTHO05D007187 4.7e-60 235.0 182 64.8
Prupe.4G260700 Prunus persica HOM05D005835 ORTHO05D007187 4.4e-58 228.4 181 61.3
Duzib205G1381 Durio zibethinus HOM05D005835 ORTHO05D007187 1.3e-57 226.9 179 61.5
Hma1.2p1_2131F.1_g314730 Hydrangea macrophylla HOM05D005835 ORTHO05D007187 4.8e-57 224.9 180 63.3
Cfa012808 Carpinus fangiana HOM05D005835 ORTHO05D007187 3.1e-56 222.2 180 64.4
Atru.chr9.1404 Acer truncatum HOM05D005835 ORTHO05D007187 2.7e-55 219.2 179 62.0
CiPaw.12G105500 Carya illinoinensis HOM05D005835 ORTHO05D007187 2.7e-55 219.2 181 62.4
Dinv21579 Davidia involucrata HOM05D005835 ORTHO05D007187 2.7e-55 219.2 175 62.3
Dinv39089 Davidia involucrata HOM05D005835 ORTHO05D007187 2.7e-55 219.2 172 62.8
Nn1g01126 Nelumbo nucifera HOM05D005835 ORTHO05D007187 1.3e-54 216.9 176 61.4
Thecc.03G259800 Theobroma cacao HOM05D005835 ORTHO05D007187 1.7e-54 216.5 181 60.2
Duzib084G0572 Durio zibethinus HOM05D005835 ORTHO05D007187 5.0e-54 214.9 179 60.9
Nn1g01130 Nelumbo nucifera HOM05D005835 ORTHO05D007187 5.0e-54 214.9 176 60.8
MELO3C013977.2 Cucumis melo HOM05D005835 ORTHO05D007187 1.1e-53 213.8 182 59.3
ClCG10G003070 Citrullus lanatus HOM05D005835 ORTHO05D007187 1.9e-53 213.0 182 59.9
Eucgr.E01477 Eucalyptus grandis HOM05D005835 ORTHO05D007187 1.9e-53 213.0 180 60.6
CsaV3_3G003110 Cucumis sativus L. HOM05D005835 ORTHO05D007187 2.5e-53 212.6 182 58.2
Sabra03G0079300 Salix brachista HOM05D005835 ORTHO05D007187 1.6e-52 209.9 181 58.0
TWI81G0081 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 4.7e-52 208.4 180 56.1
TAR374G0447 Trochodendron aralioides HOM05D005835 ORTHO05D007187 4.7e-52 208.4 177 58.8
Gohir.D12G222800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 1.4e-51 206.8 182 57.7
Gorai.008G238900 Gossypium raimondii HOM05D005835 ORTHO05D007187 1.4e-51 206.8 182 57.7
Manes.01G074300 Manihot esculenta HOM05D005835 ORTHO05D007187 1.4e-51 206.8 173 61.3
Potri.001G118700 Populus trichocarpa HOM05D005835 ORTHO05D007187 1.4e-51 206.8 181 58.0
COL.COLO4_23892 Corchorus olitorius HOM05D005835 ORTHO05D007187 2.3e-51 206.1 181 59.1
Oeu040228.1 Olea europaea HOM05D005835 ORTHO05D007187 3.0e-51 205.7 180 58.9
Gohir.D03G159700 Gossypium hirsutum HOM05D005835 ORTHO05D007187 4.0e-51 205.3 181 59.1
MD04G1080500 Malus domestica HOM05D005835 ORTHO05D007187 4.0e-51 205.3 181 58.0
Nitab4.5_0005535g0030 Nicotiana tabacum HOM05D005835 ORTHO05D007187 5.2e-51 204.9 180 56.7
CiPaw.11G149200 Carya illinoinensis HOM05D005835 ORTHO05D007187 8.8e-51 204.1 179 57.5
Sed0018910 Sechium edule HOM05D005835 ORTHO05D007187 1.2e-50 203.8 182 57.7
Potri.003G114200 Populus trichocarpa HOM05D005835 ORTHO05D007187 2.6e-50 202.6 181 56.9
Gohir.A12G220500 Gossypium hirsutum HOM05D005835 ORTHO05D007187 3.4e-50 202.2 182 56.6
QL03p017823 Quercus lobata HOM05D005835 ORTHO05D007187 5.7e-50 201.4 181 59.1
MBI04_g35668_MAGBIO Magnolia biondii HOM05D005835 ORTHO05D007187 7.5e-50 201.1 176 58.0
FvH4_5g00490 Fragaria vesca HOM05D005835 ORTHO05D007187 1.7e-49 199.9 182 54.4
FAN18G1180 Fragaria x ananassa HOM05D005835 ORTHO05D007187 1.7e-49 199.9 182 54.4
Nitab4.5_0005230g0060 Nicotiana tabacum HOM05D005835 ORTHO05D007187 1.7e-49 199.9 180 54.4
QL93p2009_0035 Quercus lobata HOM05D005835 ORTHO05D007187 2.2e-49 199.5 181 58.6
FAN08G1980 Fragaria x ananassa HOM05D005835 ORTHO05D007187 2.8e-49 199.1 182 53.3
FAN13G2021 Fragaria x ananassa HOM05D005835 ORTHO05D007187 3.7e-49 198.7 182 53.8
Gorai.003G168000 Gossypium raimondii HOM05D005835 ORTHO05D007187 6.3e-49 198.0 181 57.5
TAR375G0176 Trochodendron aralioides HOM05D005835 ORTHO05D007187 8.3e-49 197.6 172 61.0
PGSC0003DMG400029987 Solanum tuberosum HOM05D005835 ORTHO05D007187 1.4e-48 196.8 180 55.6
arahy.Tifrunner.gnm1.ann1.7G3HX4 Arachis hypogaea HOM05D005835 ORTHO05D007187 1.8e-48 196.4 174 55.2
CAN.G1528.1 Capsicum annuum HOM05D005835 ORTHO05D007187 1.8e-48 196.4 180 53.9
SalBow6G1585 Salvia bowleyana HOM05D005835 ORTHO05D007187 2.4e-48 196.1 177 58.8
FAN04G1493 Fragaria x ananassa HOM05D005835 ORTHO05D007187 3.1e-48 195.7 182 53.8
Manes.02G034200 Manihot esculenta HOM05D005835 ORTHO05D007187 3.1e-48 195.7 179 56.4
Solyc11g065270.2 Solanum lycopersicum HOM05D005835 ORTHO05D007187 5.4e-48 194.9 180 54.4
Sopen11g025020 Solanum pennellii HOM05D005835 ORTHO05D007187 5.4e-48 194.9 180 54.4
Gohir.A03G013800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 1.6e-47 193.4 181 55.8
Rhsim07G0102800 Rhododendron simsii HOM05D005835 ORTHO05D007187 2.0e-47 193.0 170 55.9
CANSAT21G1576 Cannabis sativa HOM05D005835 ORTHO05D007187 3.5e-47 192.2 179 57.5
arahy.Tifrunner.gnm1.ann1.4SJ6CH Arachis hypogaea HOM05D005835 ORTHO05D007187 5.9e-47 191.4 169 54.4
Sabra01G0091600 Salix brachista HOM05D005835 ORTHO05D007187 5.9e-47 191.4 181 54.7
PGR031G1343 Punica granatum HOM05D005835 ORTHO05D007187 1.3e-46 190.3 181 55.8
DCAR_000844 Daucus carota HOM05D004805 ORTHO05D007187 1.7e-46 189.9 181 53.6
Cc08_g13120 Coffea canephora HOM05D005835 ORTHO05D007187 2.9e-46 189.1 179 54.2
Ciclev10022502m.g Citrus clementina HOM05D005835 ORTHO05D007187 1.1e-45 187.2 181 56.4
Migut.A00824 Erythranthe guttata HOM05D005835 ORTHO05D007187 1.5e-45 186.8 180 52.8
Lalb_Chr16g0389651 Lupinus albus HOM05D005835 ORTHO05D007187 1.9e-45 186.4 170 54.7
Sc02g0009280 Simmondsia chinensis HOM05D005835 ORTHO05D007187 4.2e-45 185.3 176 52.3
Migut.A00868 Erythranthe guttata HOM05D005835 ORTHO05D007187 5.5e-45 184.9 180 52.2
Lalb_Chr05g0225471 Lupinus albus HOM05D005835 ORTHO05D007187 5.5e-45 184.9 170 53.5
MSTRG.12070 Avicennia marina HOM05D005835 ORTHO05D007187 2.8e-44 182.6 177 52.0
CDE02G0720 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 2.8e-44 182.6 179 53.1
SGA_v2.0_scaffold146G36171 Striga asiatica HOM05D005835 ORTHO05D007187 3.6e-44 182.2 178 51.7
QL12p014300 Quercus lobata HOM05D005835 ORTHO05D007187 8.0e-44 181.0 172 54.7
Peaxi162Scf00004g03718 Petunia axillaris HOM05D005835 ORTHO05D007187 1.0e-43 180.6 174 52.9
RcHm_v2.0_Chr7g0202021 Rosa chinensis HOM05D005835 ORTHO05D007187 3.0e-43 179.1 182 51.6
SGA_v2.0_scaffold120G32837 Striga asiatica HOM05D005835 ORTHO05D007187 6.8e-43 177.9 181 52.5
AL6G47200 Arabidopsis lyrata HOM05D005835 ORTHO05D007187 1.2e-42 177.2 181 51.9
Aa31LG9G10270 Aethionema arabicum HOM05D005835 ORTHO05D007187 1.5e-42 176.8 183 52.5
AT4G12340 Arabidopsis thaliana HOM05D005835 ORTHO05D007187 3.4e-42 175.6 181 51.4
Sp6g05250 Schrenkiella parvula HOM05D005835 ORTHO05D007187 7.5e-42 174.5 179 50.3
Glyma.05G051800 Glycine max HOM05D005835 ORTHO05D007187 1.3e-41 173.7 174 53.4
Aqoxy7G00679 Aquilegia oxysepala HOM05D005835 ORTHO05D007187 2.2e-41 172.9 173 53.8
ECA233G2089 Erigeron canadensis HOM05D005835 ORTHO05D007187 3.7e-41 172.2 182 52.2
THA.LOC104806344 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 2.4e-40 169.5 183 51.9
Phvul.003G214325 Phaseolus vulgaris HOM05D005835 ORTHO05D007187 3.1e-40 169.1 174 50.0
CARHR253910 Cardamine hirsuta HOM05D005835 ORTHO05D007187 5.4e-40 168.3 176 51.1
Sc16g0006190 Simmondsia chinensis HOM05D005835 ORTHO05D007187 9.2e-40 167.5 172 49.4
VMungo1215G0693 Vigna mungo HOM05D005835 ORTHO05D007187 9.2e-40 167.5 174 50.0
Ca_12275_v3 Cicer arietinum L. HOM05D005835 ORTHO05D007187 5.9e-39 164.9 176 48.3
CDE04G3390 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 7.8e-39 164.5 179 49.7
THA.LOC104813805 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 1.3e-38 163.7 179 49.7
Ah.01g013950 Amaranthus hybridus HOM05D005835 ORTHO05D007187 2.9e-38 162.5 173 48.0
C02p40850 Brassica napus HOM05D005835 ORTHO05D007187 2.9e-38 162.5 179 46.9
BcaC03g16290 Brassica carinata HOM05D005835 ORTHO05D007187 5.0e-38 161.8 179 46.9
BolC2t10102H Brassica oleracea HOM05D005835 ORTHO05D007187 5.0e-38 161.8 179 46.9
EL10Ac4g07900 Beta vulgaris HOM05D005835 ORTHO05D007187 6.6e-38 161.4 173 49.1
AUR62029858 Chenopodium quinoa HOM05D005835 ORTHO05D007187 1.1e-37 160.6 170 49.4
AUR62025857 Chenopodium quinoa HOM05D005835 ORTHO05D007187 1.5e-37 160.2 170 50.0
Psat0s1988g0040 Pisum sativum HOM05D005835 ORTHO05D007187 2.5e-37 159.5 174 47.7
TPR.G37587 Trifolium pratense HOM05D005835 ORTHO05D007187 2.5e-37 159.5 174 47.7
HanXRQChr02g0049681 Helianthus annuus HOM05D005835 ORTHO05D007187 3.3e-37 159.1 181 48.1
PSO782G1790 Papaver somniferum HOM05D005835 ORTHO05D007187 3.3e-37 159.1 187 49.7
TWI15G0429 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 3.3e-37 159.1 117 65.0
A02p25690 Brassica napus HOM05D005835 ORTHO05D007187 5.6e-37 158.3 179 45.3
Hund02098 Selenicereus undatus HOM05D005835 ORTHO05D007187 1.2e-36 157.1 171 49.7
Thhalv10029018m.g Eutrema salsugineum HOM05D005835 ORTHO05D007187 1.6e-36 156.8 177 47.5
Carub.0006s3148 Capsella rubella HOM05D005835 ORTHO05D007187 2.8e-36 156.0 181 48.1
BraA02t07561Z Brassica rapa HOM05D005835 ORTHO05D007187 4.7e-36 155.2 179 45.3
HanXRQChr13g0394681 Helianthus annuus HOM05D005835 ORTHO05D007187 4.7e-36 155.2 181 49.2
A09p26960 Brassica napus HOM05D005835 ORTHO05D007187 3.1e-35 152.5 181 47.0
C09p34190 Brassica napus HOM05D005835 ORTHO05D007187 3.1e-35 152.5 181 46.4
BolC9t56264H Brassica oleracea HOM05D005835 ORTHO05D007187 3.1e-35 152.5 181 46.4
BraA09t38266Z Brassica rapa HOM05D005835 ORTHO05D007187 3.1e-35 152.5 181 47.0
BcaB05g23754 Brassica carinata HOM05D005835 ORTHO05D007187 5.2e-35 151.8 179 45.3
PSO478G0096 Papaver somniferum HOM05D005835 ORTHO05D007187 8.9e-35 151.0 188 48.9
BcaB01g01732 Brassica carinata HOM05D005835 ORTHO05D007187 1.5e-34 150.2 180 44.4
Medtr4g102330 Medicago truncatula HOM05D005835 ORTHO05D007187 5.8e-34 148.3 175 44.6
GSVIVG01004287001 Vitis vinifera HOM05D005835 ORTHO05D007187 9.8e-34 147.5 175 48.6
BcaC04g21221 Brassica carinata HOM05D005835 ORTHO05D007187 1.3e-33 147.1 173 46.2
GSVIVG01007420001 Vitis vinifera HOM05D005835 ORTHO05D007187 1.1e-32 144.1 172 48.3
CSS0045584 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 2.4e-32 142.9 150 49.3
HPP92_005292 Vanilla planifolia HOM05D005835 ORTHO05D007187 2.4e-32 142.9 173 46.8
CARHR253930 Cardamine hirsuta HOM05D005835 ORTHO05D007187 3.2e-32 142.5 111 62.2
CSS0008349 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 5.4e-32 141.7 169 46.2
Os05g0103500 Oryza sativa ssp. japonica HOM05D005835 ORTHO05D007187 6.6e-30 134.8 182 41.8
Lsat_1_v5_gn_6_4381 Lactuca sativa HOM05D005835 ORTHO05D007187 9.5e-29 131.0 174 44.3
ATR0115G012 Amborella trichopoda HOM05D005835 ORTHO05D007187 1.5e-26 123.6 178 46.6
SHI20590 Sapria himalayana HOM05D005835 ORTHO05D007187 2.6e-26 122.9 180 42.8
Zm00001eb356210 Zea mays HOM05D005835 ORTHO05D007187 3.7e-25 119.0 182 41.2
Actinidia05173 Actinidia chinensis HOM05D005835 ORTHO05D000538 4.9e-25 118.6 112 54.5
SEGI_03973 Sequoiadendron giganteum HOM05D005835 ORTHO05D007187 2.3e-19 99.8 182 36.8
Mapoly0001s0295 Marchantia polymorpha HOM05D005835 ORTHO05D007187 3.5e-15 85.9 185 32.4
Pp3c15_5650 Physcomitrium patens HOM05D005835 ORTHO05D007187 2.2e-09 66.6 181 27.6
Pp3c8_11610 Physcomitrium patens HOM05D005835 ORTHO05D007187 1.1e-08 64.3 183 26.8


User provided reference genes

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