Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc28.32 Carica papaya HOM05D006080 ORTHO05D007382 2.6e-115 420.2 593 100.0
Cfa002986 Carpinus fangiana HOM05D006080 ORTHO05D007382 2.4e-52 211.1 199 60.3
Haze_26015 Corylus avellana HOM05D006080 ORTHO05D007382 5.3e-52 209.9 199 59.8
QL02p058222 Quercus lobata HOM05D006080 ORTHO05D007382 5.3e-52 209.9 205 57.6
Thecc.09G076600 Theobroma cacao HOM05D006080 ORTHO05D007382 5.3e-52 209.9 204 59.3
QL93p0100_0628 Quercus lobata HOM05D006080 ORTHO05D007382 1.5e-51 208.4 205 57.6
CiPaw.03G206100 Carya illinoinensis HOM05D006080 ORTHO05D007382 2.6e-51 207.6 206 55.8
Duzib187G1039 Durio zibethinus HOM05D006080 ORTHO05D007382 9.9e-51 205.7 205 58.0
MD02G1091700 Malus domestica HOM05D006080 ORTHO05D007382 5.5e-49 199.9 202 56.4
CANSAT56G0731 Cannabis sativa HOM05D006080 ORTHO05D007382 3.5e-48 197.2 205 57.6
Duzib168G1192 Durio zibethinus HOM05D006080 ORTHO05D007382 1.9e-46 191.4 203 54.2
MD15G1217800 Malus domestica HOM05D006080 ORTHO05D007382 1.9e-46 191.4 209 52.6
Gorai.009G035900 Gossypium raimondii HOM05D006080 ORTHO05D007382 1.8e-44 184.9 202 52.0
Prupe.7G198600 Prunus persica HOM05D006080 ORTHO05D007382 3.1e-44 184.1 159 60.4
COL.COLO4_18095 Corchorus olitorius HOM05D006080 ORTHO05D007382 1.7e-42 178.3 203 53.7
Manes.09G158700 Manihot esculenta HOM05D006080 ORTHO05D007382 1.7e-42 178.3 156 59.0
Potri.006G141800 Populus trichocarpa HOM05D006080 ORTHO05D007382 1.7e-42 178.3 158 61.4
ClCG11G001430 Citrullus lanatus HOM05D006080 ORTHO05D007382 3.8e-42 177.2 197 51.8
Ciclev10007804m.g Citrus clementina HOM05D006080 ORTHO05D007382 1.1e-41 175.6 206 52.9
TWI14G1385 Tripterygium wilfordii HOM05D006080 ORTHO05D007382 1.9e-41 174.9 156 58.3
Sabra06G0110900 Salix brachista HOM05D006080 ORTHO05D007382 2.1e-40 171.4 147 60.5
FAN04G2899 Fragaria x ananassa HOM05D006080 ORTHO05D007382 2.7e-40 171.0 189 51.3
FvH4_5g31880 Fragaria vesca HOM05D006080 ORTHO05D007382 4.6e-40 170.2 158 57.6
RcHm_v2.0_Chr7g0227901 Rosa chinensis HOM05D006080 ORTHO05D007382 6.1e-40 169.9 167 53.9
FAN08G1188 Fragaria x ananassa HOM05D006080 ORTHO05D007382 1.0e-39 169.1 184 51.6
Sed0020593 Sechium edule HOM05D006080 ORTHO05D007382 1.3e-39 168.7 201 48.8
TWI59G0376 Tripterygium wilfordii HOM05D006080 ORTHO05D007382 6.7e-39 166.4 152 54.6
Gorai.013G224200 Gossypium raimondii HOM05D006080 ORTHO05D007382 1.1e-38 165.6 163 56.4
FAN18G2998 Fragaria x ananassa HOM05D006080 ORTHO05D007382 4.3e-38 163.7 157 56.1
MELO3C004654.2 Cucumis melo HOM05D006080 ORTHO05D007382 5.7e-38 163.3 198 49.5
Atru.chr7.1705 Acer truncatum HOM05D006080 ORTHO05D007382 9.7e-38 162.5 145 58.6
TAR383G0956 Trochodendron aralioides HOM05D006080 ORTHO05D007382 9.7e-38 162.5 192 49.0
Gohir.A13G190700 Gossypium hirsutum HOM05D006080 ORTHO05D007382 1.6e-37 161.8 161 55.9
CsaV3_2G001150 Cucumis sativus L. HOM05D006080 ORTHO05D007382 4.8e-37 160.2 157 54.1
Lj4g0003679 Lotus japonicus HOM05D006080 ORTHO05D007382 8.2e-37 159.5 169 51.5
Lalb_Chr07g0181201 Lupinus albus HOM05D006080 ORTHO05D007382 4.1e-36 157.1 146 52.7
Lalb_Chr23g0276361 Lupinus albus HOM05D006080 ORTHO05D007382 1.7e-34 151.8 115 58.3
Nn7g36733 Nelumbo nucifera HOM05D006080 ORTHO05D007382 2.9e-34 151.0 165 49.7
Thhalv10002477m.g Eutrema salsugineum HOM05D006080 ORTHO05D007382 3.2e-33 147.5 146 52.1
AT2G06000 Arabidopsis thaliana HOM05D006080 ORTHO05D007382 7.2e-33 146.4 143 53.1
Carub.0003s2711 Capsella rubella HOM05D006080 ORTHO05D007382 2.1e-32 144.8 144 51.4
AL3G43560 Arabidopsis lyrata HOM05D006080 ORTHO05D007382 2.7e-32 144.4 143 51.7
arahy.Tifrunner.gnm1.ann1.YW7MJY Arachis hypogaea HOM05D006080 ORTHO05D007382 3.6e-32 144.1 155 49.0
Glyma.17G049100 Glycine max HOM05D006080 ORTHO05D007382 4.6e-32 143.7 164 48.8
BcaC06g35949 Brassica carinata HOM05D006080 ORTHO05D007382 7.9e-32 142.9 146 49.3
CARHR103620 Cardamine hirsuta HOM05D006080 ORTHO05D007382 1.4e-31 142.1 148 51.4
Sp3g24500 Schrenkiella parvula HOM05D006080 ORTHO05D007382 2.3e-31 141.4 146 50.7
THA.LOC104808885 Tarenaya hassleriana HOM05D006080 ORTHO05D007382 3.9e-31 140.6 150 52.0
Aa31sc481G20 Aethionema arabicum HOM05D006080 ORTHO05D007382 5.1e-31 140.2 146 48.6
Sc14g0000540 Simmondsia chinensis HOM05D006080 ORTHO05D007382 8.8e-31 139.4 160 50.0
Atru.BG.18.p Acer truncatum HOM05D006080 ORTHO05D007382 2.0e-30 138.3 100 67.0
VMungo1215G0155 Vigna mungo HOM05D006080 ORTHO05D007382 2.0e-30 138.3 111 58.6
C07p09380 Brassica napus HOM05D006080 ORTHO05D007382 2.5e-30 137.9 146 48.6
BolC7t41361H Brassica oleracea HOM05D006080 ORTHO05D007382 2.5e-30 137.9 146 48.6
Phvul.009G021500 Phaseolus vulgaris HOM05D006080 ORTHO05D007382 3.3e-30 137.5 115 52.2
A07p06330 Brassica napus HOM05D006080 ORTHO05D007382 5.7e-30 136.7 146 47.9
THA.LOC104815335 Tarenaya hassleriana HOM05D006080 ORTHO05D007382 5.7e-30 136.7 142 47.9
BraA07t28425Z Brassica rapa HOM05D006080 ORTHO05D007382 1.3e-29 135.6 146 47.3
VMungo1309G1452 Vigna mungo HOM05D006080 ORTHO05D007382 4.8e-29 133.7 115 51.3
Glyma.04G019000 Glycine max HOM05D006080 ORTHO05D007382 8.2e-29 132.9 115 52.2
Sc08g0008900 Simmondsia chinensis HOM05D006080 ORTHO05D007382 1.1e-28 132.5 202 40.1
BcaB06g26878 Brassica carinata HOM05D006080 ORTHO05D007382 1.4e-28 132.1 146 45.9
Phvul.009G114250 Phaseolus vulgaris HOM05D006080 ORTHO05D007382 2.4e-28 131.3 111 54.1
Phvul.011G177400 Phaseolus vulgaris HOM05D006080 ORTHO05D007382 3.1e-28 131.0 111 54.1
CSS0013189 Camellia sinensis var. sinensis HOM05D006080 ORTHO05D007382 9.1e-28 129.4 147 52.4
CSS0013911 Camellia sinensis var. sinensis HOM05D006080 ORTHO05D007382 9.1e-28 129.4 147 52.4
SHI30075 Sapria himalayana HOM05D006080 ORTHO05D007382 1.2e-27 129.0 166 42.2
TPR.G27762 Trifolium pratense HOM05D006080 ORTHO05D007382 2.6e-27 127.9 120 48.3
AUR62044025 Chenopodium quinoa HOM05D006080 ORTHO05D007382 3.4e-27 127.5 158 48.1
AUR62003304 Chenopodium quinoa HOM05D006080 ORTHO05D007382 1.3e-26 125.6 158 46.8
Lj6g0017816 Lotus japonicus HOM05D006080 ORTHO05D007382 1.7e-26 125.2 133 48.1
Psat1g133120 Pisum sativum HOM05D006080 ORTHO05D007382 6.5e-26 123.2 117 47.9
Rhsim12G0001600 Rhododendron simsii HOM05D006080 ORTHO05D007382 1.4e-25 122.1 128 51.6
Lj9C313T10 Lonicera japonica HOM05D006080 ORTHO05D007382 2.5e-25 121.3 161 45.3
TPR.G30187 Trifolium pratense HOM05D006080 ORTHO05D007382 4.2e-25 120.6 112 50.9
Rhsim04G0100300 Rhododendron simsii HOM05D006080 ORTHO05D007382 5.5e-25 120.2 117 54.7
Dinv24252 Davidia involucrata HOM05D006080 ORTHO05D007382 7.2e-25 119.8 153 49.0
vmacro00920 Vaccinium macrocarpon HOM05D006080 ORTHO05D007382 7.2e-25 119.8 151 47.0
Hund19654 Selenicereus undatus HOM05D006080 ORTHO05D007382 1.6e-24 118.6 161 44.7
PGR142G0728 Punica granatum HOM05D006080 ORTHO05D007382 2.7e-24 117.9 160 43.1
Medtr2g041700 Medicago truncatula HOM05D006080 ORTHO05D007382 3.0e-23 114.4 116 45.7
Glyma.06G019300 Glycine max HOM05D006080 ORTHO05D007382 1.1e-22 112.5 116 45.7
Medtr4g040410 Medicago truncatula HOM05D006080 ORTHO05D007382 1.1e-22 112.5 109 50.5
Ah.07g204920 Amaranthus hybridus HOM05D002607 ORTHO05D008816 4.4e-22 110.5 133 48.1
Aqoxy5G04299 Aquilegia oxysepala HOM05D006080 ORTHO05D007382 6.3e-21 106.7 163 42.9
arahy.Tifrunner.gnm1.ann1.3R1N4J Arachis hypogaea HOM05D006080 ORTHO05D007382 6.3e-21 106.7 86 57.0
Migut.B00654 Erythranthe guttata HOM05D006080 ORTHO05D007382 1.1e-20 105.9 153 42.5
HanXRQChr05g0146121 Helianthus annuus HOM05D006080 ORTHO05D007382 7.0e-20 103.2 114 45.6
Solyc01g104630.3 Solanum lycopersicum HOM05D006080 ORTHO05D007382 9.1e-20 102.8 153 44.4
Oeu000645.1 Olea europaea HOM05D006080 ORTHO05D007382 1.2e-19 102.4 113 46.9
CSS0008787 Camellia sinensis var. sinensis HOM05D006080 ORTHO05D007382 1.5e-19 102.1 118 52.5
Sopen01g047140 Solanum pennellii HOM05D006080 ORTHO05D007382 1.5e-19 102.1 152 43.4
CDE02G4345 Ceratophyllum demersum HOM05D006080 ORTHO05D007382 4.5e-19 100.5 135 39.3
Nitab4.5_0000249g0340 Nicotiana tabacum HOM05D006080 ORTHO05D007382 4.5e-19 100.5 152 44.7
PGSC0003DMG401029758 Solanum tuberosum HOM05D006080 ORTHO05D007382 4.5e-19 100.5 153 43.8
SGA_v2.0_scaffold332G48925 Striga asiatica HOM05D006080 ORTHO05D007382 2.2e-18 98.2 154 40.3
DCAR_029235 Daucus carota HOM05D006080 ORTHO05D007382 2.9e-18 97.8 114 49.1
Lsat_1_v5_gn_2_12120 Lactuca sativa HOM05D006080 ORTHO05D007382 2.9e-18 97.8 114 45.6
MBI19_g16224_MAGBIO Magnolia biondii HOM05D006080 ORTHO05D007382 2.9e-18 97.8 110 44.5
MSTRG.16549 Avicennia marina HOM05D006080 ORTHO05D007382 5.0e-18 97.1 114 44.7
HanXRQChr10g0292001 Helianthus annuus HOM05D006080 ORTHO05D007382 1.5e-17 95.5 114 45.6
Nitab4.5_0009570g0010 Nicotiana tabacum HOM05D006080 ORTHO05D007382 1.5e-17 95.5 152 44.1
ATR0598G196 Amborella trichopoda HOM05D006080 ORTHO05D007382 3.2e-17 94.4 127 40.2
SalBow5G2015 Salvia bowleyana HOM05D006080 ORTHO05D007382 4.7e-16 90.5 153 37.9
SalBow5G4726 Salvia bowleyana HOM05D006080 ORTHO05D007382 4.7e-16 90.5 153 37.9
CAN.G1702.1 Capsicum annuum HOM05D006080 ORTHO05D007382 2.3e-15 88.2 153 37.3
AUR62016281 Chenopodium quinoa HOM05D006080 ORTHO05D007382 2.3e-15 88.2 90 47.8
Ca_02204_v3 Cicer arietinum L. HOM05D006080 ORTHO05D007382 3.9e-15 87.4 79 50.6
SalBow6G3562 Salvia bowleyana HOM05D006080 ORTHO05D007382 1.1e-14 85.9 114 43.9
SalBow6G5833 Salvia bowleyana HOM05D006080 ORTHO05D007382 1.1e-14 85.9 114 43.9
Actinidia00227 Actinidia chinensis HOM05D006080 ORTHO05D007382 9.7e-14 82.8 68 55.9
Cc02_g22120 Coffea canephora HOM05D006080 ORTHO05D007382 4.1e-12 77.4 91 42.9
CDE06G1744 Ceratophyllum demersum HOM05D000591 ORTHO05D000579 5.3e-12 77.0 121 38.0
ECA238G3807 Erigeron canadensis HOM05D006080 ORTHO05D007382 9.4e-09 66.2 86 43.0
Eucgr.C00814 Eucalyptus grandis HOM05D006080 ORTHO05D007382 9.7e-06 56.2 42 61.9


User provided reference genes

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