Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc272.6 Carica papaya HOM05D003580 ORTHO05D004441 9.9e-258 892.9 435 100.0
CiPaw.04G180400 Carya illinoinensis HOM05D003580 ORTHO05D004441 2.7e-69 266.9 159 81.8
QL01p005312 Quercus lobata HOM05D003580 ORTHO05D004441 2.7e-69 266.9 159 81.1
Thecc.05G131900 Theobroma cacao HOM05D003580 ORTHO05D004441 1.7e-68 264.2 160 79.4
Duzib140G0001 Durio zibethinus HOM05D003580 ORTHO05D004441 8.6e-68 261.9 160 80.6
Cfa002307 Carpinus fangiana HOM05D003580 ORTHO05D004441 5.6e-67 259.2 159 78.6
TWI53G0960 Tripterygium wilfordii HOM05D003580 ORTHO05D004441 5.6e-67 259.2 160 78.1
Sabra10G0136200 Salix brachista HOM05D003580 ORTHO05D004441 1.2e-66 258.1 160 80.0
GSVIVG01006267001 Vitis vinifera HOM05D003580 ORTHO05D004441 1.2e-66 258.1 159 76.7
THA.LOC104820933 Tarenaya hassleriana HOM05D003580 ORTHO05D004441 2.8e-66 256.9 161 78.9
Potri.010G177200 Populus trichocarpa HOM05D003580 ORTHO05D004441 4.7e-66 256.1 159 78.6
Prupe.1G575000 Prunus persica HOM05D003580 ORTHO05D004441 8.0e-66 255.4 158 77.8
FAN13G3018 Fragaria x ananassa HOM05D003580 ORTHO05D004441 1.4e-65 254.6 160 78.8
Gohir.A04G049300 Gossypium hirsutum HOM05D003580 ORTHO05D004441 5.2e-65 252.7 160 78.1
Actinidia30566 Actinidia chinensis HOM05D003580 ORTHO05D004441 8.9e-65 251.9 160 76.9
FAN04G1111 Fragaria x ananassa HOM05D003580 ORTHO05D004441 8.9e-65 251.9 160 78.1
FAN08G0025 Fragaria x ananassa HOM05D003580 ORTHO05D004441 1.2e-64 251.5 160 77.5
Manes.13G155600 Manihot esculenta HOM05D003580 ORTHO05D004441 1.2e-64 251.5 159 76.1
Peaxi162Scf00076g00824 Petunia axillaris HOM05D003580 ORTHO05D004441 1.2e-64 251.5 159 74.8
Aa31LG11G13320 Aethionema arabicum HOM05D003580 ORTHO05D004441 1.5e-64 251.1 162 75.9
FAN18G2191 Fragaria x ananassa HOM05D003580 ORTHO05D004441 1.5e-64 251.1 159 78.6
CANSAT64G0454 Cannabis sativa HOM05D003580 ORTHO05D004441 2.6e-64 250.4 162 75.3
Actinidia22096 Actinidia chinensis HOM05D003580 ORTHO05D004441 3.4e-64 250.0 160 76.2
Ciclev10014110m.g Citrus clementina HOM05D003580 ORTHO05D004441 4.4e-64 249.6 159 77.4
Gohir.D04G010100 Gossypium hirsutum HOM05D003580 ORTHO05D004441 1.3e-63 248.1 160 75.0
Gorai.012G011900 Gossypium raimondii HOM05D003580 ORTHO05D004441 1.3e-63 248.1 160 75.0
Gohir.A05G405500 Gossypium hirsutum HOM05D003580 ORTHO05D004441 1.7e-63 247.7 160 75.6
Gorai.009G355000 Gossypium raimondii HOM05D003580 ORTHO05D004441 1.7e-63 247.7 160 76.2
COL.COLO4_02821 Corchorus olitorius HOM05D003580 ORTHO05D004441 2.2e-63 247.3 192 66.1
Gohir.D05G331100 Gossypium hirsutum HOM05D003580 ORTHO05D004441 2.2e-63 247.3 160 76.2
Atru.chr10.124 Acer truncatum HOM05D003580 ORTHO05D004441 2.9e-63 246.9 155 78.1
Sp6g27860 Schrenkiella parvula HOM05D003580 ORTHO05D004441 3.7e-63 246.5 160 74.4
Dinv20243 Davidia involucrata HOM05D003580 ORTHO05D004441 4.9e-63 246.1 159 74.2
Thhalv10012518m.g Eutrema salsugineum HOM05D003580 ORTHO05D004441 4.9e-63 246.1 160 74.4
TAR633G0565 Trochodendron aralioides HOM05D003580 ORTHO05D004441 4.9e-63 246.1 159 74.8
Atru.chr10.106 Acer truncatum HOM05D003580 ORTHO05D004441 8.3e-63 245.4 155 78.1
TAR362G0544 Trochodendron aralioides HOM05D003580 ORTHO05D004441 8.3e-63 245.4 159 74.8
BraA10t44342Z Brassica rapa HOM05D003580 ORTHO05D004441 1.1e-62 245.0 161 73.3
Hund21939 Selenicereus undatus HOM05D003580 ORTHO05D004441 1.1e-62 245.0 160 72.5
EL10Ac4g10045 Beta vulgaris HOM05D003580 ORTHO05D004441 1.4e-62 244.6 160 73.1
BraA03t10094Z Brassica rapa HOM05D003580 ORTHO05D004441 1.4e-62 244.6 160 74.4
A10p22770 Brassica napus HOM05D003580 ORTHO05D004441 2.4e-62 243.8 160 73.8
C03p08900 Brassica napus HOM05D003580 ORTHO05D004441 2.4e-62 243.8 160 74.4
BolC3t13385H Brassica oleracea HOM05D003580 ORTHO05D004441 2.4e-62 243.8 160 74.4
RcHm_v2.0_Chr7g0220971 Rosa chinensis HOM05D003580 ORTHO05D004441 2.4e-62 243.8 151 80.8
CAN.G438.18 Capsicum annuum HOM05D003580 ORTHO05D004441 3.2e-62 243.4 160 72.5
BolC9t58909H Brassica oleracea HOM05D003580 ORTHO05D004441 4.1e-62 243.0 161 72.7
Potri.008G079700 Populus trichocarpa HOM05D003580 ORTHO05D004441 4.1e-62 243.0 159 74.8
Nitab4.5_0000001g0420 Nicotiana tabacum HOM05D003580 ORTHO05D004441 7.0e-62 242.3 158 72.8
Nitab4.5_0000693g0020 Nicotiana tabacum HOM05D003580 ORTHO05D004441 7.0e-62 242.3 159 71.7
Sopen03g039520 Solanum pennellii HOM05D003580 ORTHO05D004441 7.0e-62 242.3 159 72.3
BcaB01g04993 Brassica carinata HOM05D003580 ORTHO05D004441 9.2e-62 241.9 160 73.8
C09p60740 Brassica napus HOM05D003580 ORTHO05D004441 9.2e-62 241.9 160 73.1
A03p07660 Brassica napus HOM05D003580 ORTHO05D004441 1.2e-61 241.5 160 73.1
Oeu055491.1 Olea europaea HOM05D003580 ORTHO05D004441 1.2e-61 241.5 158 73.4
Haze_24513 Corylus avellana HOM05D003580 ORTHO05D004441 3.5e-61 240.0 205 61.5
CARHR197010 Cardamine hirsuta HOM05D003580 ORTHO05D004441 4.6e-61 239.6 162 72.8
Dinv14590 Davidia involucrata HOM05D003580 ORTHO05D004441 6.0e-61 239.2 154 77.3
Lalb_Chr02g0151301 Lupinus albus HOM05D003580 ORTHO05D004441 6.0e-61 239.2 159 74.8
Solyc03g120700.3 Solanum lycopersicum HOM05D003580 ORTHO05D004441 6.0e-61 239.2 159 71.1
Oeu011931.1 Olea europaea HOM05D003580 ORTHO05D004441 7.8e-61 238.8 158 70.9
Sabra08G0059400 Salix brachista HOM05D003580 ORTHO05D004441 1.0e-60 238.4 160 73.1
DCAR_019887 Daucus carota HOM05D003580 ORTHO05D004441 2.3e-60 237.3 160 70.6
MD08G1237500 Malus domestica HOM05D003580 ORTHO05D004441 2.3e-60 237.3 150 76.7
MD15G1429400 Malus domestica HOM05D003580 ORTHO05D004441 2.3e-60 237.3 150 76.7
Phvul.007G105200 Phaseolus vulgaris HOM05D003580 ORTHO05D004441 3.9e-60 236.5 155 75.5
Glyma.20G188500 Glycine max HOM05D003580 ORTHO05D004441 1.1e-59 235.0 155 75.5
VMungo0720G1645 Vigna mungo HOM05D003580 ORTHO05D004441 1.1e-59 235.0 155 74.8
PGSC0003DMG400002624 Solanum tuberosum HOM05D003580 ORTHO05D004441 1.9e-59 234.2 159 69.8
Ca_10488_v3 Cicer arietinum L. HOM05D003580 ORTHO05D004441 2.5e-59 233.8 159 74.2
AUR62000253 Chenopodium quinoa HOM05D003580 ORTHO05D004441 4.3e-59 233.0 160 71.2
ECA248G2481 Erigeron canadensis HOM05D003580 ORTHO05D004441 4.3e-59 233.0 160 69.4
Glyma.10G201900 Glycine max HOM05D003580 ORTHO05D004441 5.6e-59 232.6 155 74.2
HanXRQChr12g0356901 Helianthus annuus HOM05D003580 ORTHO05D004441 5.6e-59 232.6 160 67.5
ClCG11G011150 Citrullus lanatus HOM05D003580 ORTHO05D004441 1.6e-58 231.1 159 69.8
Psat6g176280 Pisum sativum HOM05D003580 ORTHO05D004441 1.6e-58 231.1 158 74.1
Lalb_Chr21g0313231 Lupinus albus HOM05D003580 ORTHO05D004441 2.1e-58 230.7 155 74.2
TPR.G2546 Trifolium pratense HOM05D003580 ORTHO05D004441 2.1e-58 230.7 159 73.6
Nn5g28173 Nelumbo nucifera HOM05D003580 ORTHO05D004441 2.8e-58 230.3 156 71.2
arahy.Tifrunner.gnm1.ann1.U0AKQE Arachis hypogaea HOM05D003580 ORTHO05D004441 4.7e-58 229.6 159 72.3
Lj5g0021899 Lotus japonicus HOM05D003580 ORTHO05D004441 4.7e-58 229.6 159 72.3
MBI18_g04901_MAGBIO Magnolia biondii HOM05D003580 ORTHO05D004441 4.7e-58 229.6 159 70.4
CsaV3_2G009280 Cucumis sativus L. HOM05D003580 ORTHO05D004441 8.1e-58 228.8 159 69.2
Migut.J00662 Erythranthe guttata HOM05D003580 ORTHO05D004441 8.1e-58 228.8 159 67.9
PGR042G2902 Punica granatum HOM05D003580 ORTHO05D004441 1.1e-57 228.4 159 69.8
AUR62006600 Chenopodium quinoa HOM05D003580 ORTHO05D004441 1.8e-57 227.6 160 69.4
Cc06_g21420 Coffea canephora HOM05D003580 ORTHO05D004441 1.8e-57 227.6 159 70.4
MELO3C008782.2 Cucumis melo HOM05D003580 ORTHO05D004441 1.8e-57 227.6 159 68.6
HanXRQChr01g0024861 Helianthus annuus HOM05D003580 ORTHO05D004441 1.8e-57 227.6 160 66.9
Eucgr.G00871 Eucalyptus grandis HOM05D003580 ORTHO05D004441 2.3e-57 227.3 159 71.7
arahy.Tifrunner.gnm1.ann1.TPGZ8P Arachis hypogaea HOM05D003580 ORTHO05D004441 4.0e-57 226.5 159 71.7
Ah.04g159420 Amaranthus hybridus HOM05D003580 ORTHO05D004441 5.2e-57 226.1 159 69.8
Sed0022441 Sechium edule HOM05D003580 ORTHO05D004441 1.5e-56 224.6 159 69.2
AL6G27200 Arabidopsis lyrata HOM05D003580 ORTHO05D004441 5.8e-56 222.6 160 68.8
Aqoxy6G00271 Aquilegia oxysepala HOM05D003580 ORTHO05D004441 7.5e-56 222.2 160 66.9
Carub.0006s1449 Capsella rubella HOM05D003580 ORTHO05D004441 1.7e-55 221.1 160 68.1
MSTRG.19281 Avicennia marina HOM05D003580 ORTHO05D004441 4.9e-55 219.5 160 65.6
Nn1g09424 Nelumbo nucifera HOM05D003580 ORTHO05D004441 4.9e-55 219.5 159 69.8
Sed0017385 Sechium edule HOM05D003580 ORTHO05D004441 1.1e-54 218.4 158 67.1
PSO675G0774 Papaver somniferum HOM05D003580 ORTHO05D004441 2.4e-54 217.2 150 70.0
AT5G16300 Arabidopsis thaliana HOM05D003580 ORTHO05D004441 3.2e-54 216.9 160 66.9
PSO732G0238 Papaver somniferum HOM05D003580 ORTHO05D004441 1.6e-53 214.5 150 69.3
QL01p051611 Quercus lobata HOM05D003580 ORTHO05D004441 7.8e-53 212.2 119 84.0
unitig_749.g14304 Utricularia gibba HOM05D003580 ORTHO05D004441 3.9e-52 209.9 160 63.8
PSO063G3475 Papaver somniferum HOM05D003580 ORTHO05D004441 2.5e-51 207.2 150 66.7
vmacro09152 Vaccinium macrocarpon HOM05D003580 ORTHO05D004441 2.3e-49 200.7 282 42.9
Lj2A356T45 Lonicera japonica HOM05D003580 ORTHO05D004441 4.0e-49 199.9 122 76.2
Lsat_1_v5_gn_1_58860 Lactuca sativa HOM05D003580 ORTHO05D004441 3.4e-48 196.8 162 62.3
SGA_v2.0_scaffold31G12889 Striga asiatica HOM05D003580 ORTHO05D004441 7.6e-48 195.7 165 59.4
ATR0743G251 Amborella trichopoda HOM05D003580 ORTHO05D004441 4.9e-47 193.0 153 60.1
SGA_v2.0_scaffold1489G53965 Striga asiatica HOM05D003580 ORTHO05D004441 6.4e-47 192.6 138 64.5
CDE04G2219 Ceratophyllum demersum HOM05D003580 ORTHO05D004441 3.2e-46 190.3 159 61.0
CDE02G3888 Ceratophyllum demersum HOM05D003580 ORTHO05D004441 5.4e-46 189.5 159 61.0
Os01g0777000 Oryza sativa ssp. japonica HOM05D003580 ORTHO05D004441 1.6e-45 188.0 171 59.6
HPP92_017521 Vanilla planifolia HOM05D003580 ORTHO05D004441 6.0e-45 186.0 148 61.5
Rhsim04G0086300 Rhododendron simsii HOM05D003580 ORTHO05D004441 1.9e-43 181.0 158 59.5
Zm00001eb151630 Zea mays HOM05D003580 ORTHO05D004441 2.5e-43 180.6 161 57.8
SEGI_02361 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.6e-42 177.9 143 62.2
Zm00001eb369950 Zea mays HOM05D003580 ORTHO05D004441 3.6e-42 176.8 161 56.5
CSS0030366 Camellia sinensis var. sinensis HOM05D003580 ORTHO05D004441 2.2e-39 167.5 105 76.2
FvH4_5g28760 Fragaria vesca HOM05D003580 ORTHO05D004441 2.2e-39 167.5 99 79.8
SHI02481 Sapria himalayana HOM05D003580 ORTHO05D004441 1.0e-36 158.7 150 56.7
Medtr1g492710 Medicago truncatula HOM05D003580 ORTHO05D004441 1.3e-36 158.3 98 77.6
BcaNung02234 Brassica carinata HOM05D003580 ORTHO05D004441 8.7e-36 155.6 160 53.1
BcaB04g17891 Brassica carinata HOM05D003580 ORTHO05D004441 4.4e-32 143.3 148 52.7
arahy.Tifrunner.gnm1.ann1.0G6L2R Arachis hypogaea HOM05D003580 ORTHO05D004441 3.2e-30 137.1 91 71.4
arahy.Tifrunner.gnm1.ann1.G7UC7Z Arachis hypogaea HOM05D003580 ORTHO05D004441 3.2e-30 137.1 91 71.4
SGA_v2.0_scaffold31G12887 Striga asiatica HOM05D003580 ORTHO05D004441 1.1e-27 128.6 143 49.7
SEGI_21118 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 4.5e-24 116.7 83 67.5
Mapoly0006s0304 Marchantia polymorpha HOM05D003580 ORTHO05D004441 1.7e-23 114.8 161 42.2
AagrBONN_evm.TU.Sc2ySwM_228.612 Anthoceros agrestis HOM05D003580 ORTHO05D004441 2.7e-21 107.5 136 42.6
CBR_g38824 Chara braunii HOM05D003580 ORTHO05D000002 1.1e-17 95.5 152 40.8
Pp3c21_18130 Physcomitrium patens HOM05D003580 ORTHO05D004441 1.5e-16 91.7 85 51.8
SMO116G0219 Selaginella moellendorffii HOM05D003580 ORTHO05D004441 1.5e-16 91.7 90 51.1
Pp3c18_6580 Physcomitrium patens HOM05D003580 ORTHO05D004441 1.3e-15 88.6 79 54.4
Pp3c22_14630 Physcomitrium patens HOM05D003580 ORTHO05D004441 3.2e-14 84.0 100 48.0
Medtr1g492720 Medicago truncatula HOM05D003580 ORTHO05D004441 1.3e-12 78.6 60 68.3
MCO16G457 Micromonas commoda HOM05D003580 ORTHO05D004441 1.1e-09 68.9 83 42.2
Cre14.g628050 Chlamydomonas reinhardtii HOM05D003580 ORTHO05D004441 5.0e-07 60.1 97 36.1


User provided reference genes

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