Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc2719.1 Carica papaya HOM05D000963 ORTHO05D011117 1.6e-49 199.1 99 100.0
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 4.0e-45 184.5 96 95.8
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 4.0e-45 184.5 96 95.8
Sopen06g015040 Solanum pennellii HOM05D000963 ORTHO05D011117 8.8e-45 183.3 96 94.8
TAR633G1337 Trochodendron aralioides HOM05D001070 ORTHO05D002096 8.8e-45 183.3 96 94.8
unitig_8.g4107 Utricularia gibba HOM05D000963 ORTHO05D011117 4.4e-44 181.0 96 93.8
BcaC04g20703 Brassica carinata HOM05D000963 ORTHO05D011117 7.5e-44 180.3 97 92.8
BcaC04g20780 Brassica carinata HOM05D000963 ORTHO05D011117 7.5e-44 180.3 97 92.8
BcaNung07084 Brassica carinata HOM05D000963 ORTHO05D011117 7.5e-44 180.3 97 92.8
C04p22530 Brassica napus HOM05D000963 ORTHO05D011117 7.5e-44 180.3 97 92.8
C09p24690 Brassica napus HOM05D000963 ORTHO05D011117 7.5e-44 180.3 97 92.8
C09p39370 Brassica napus HOM05D000963 ORTHO05D011117 7.5e-44 180.3 97 92.8
BolSC47t61068H Brassica oleracea HOM05D000963 ORTHO05D011117 7.5e-44 180.3 97 92.8
MELO3C033790.2 Cucumis melo HOM05D000963 ORTHO05D011117 2.2e-43 178.7 95 94.7
arahy.Tifrunner.gnm1.ann1.URY1CV Arachis hypogaea HOM05D000533 ORTHO05D011117 3.7e-43 177.9 97 92.8
MELO3C027127.2 Cucumis melo HOM05D000963 ORTHO05D011117 5.4e-42 174.1 95 92.6
CSS0012622 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D011117 1.7e-40 169.1 97 88.7
Oeu038562.1 Olea europaea HOM05D000963 ORTHO05D011117 5.5e-39 164.1 96 87.5
arahy.Tifrunner.gnm1.ann1.UXAL1K Arachis hypogaea HOM05D000963 ORTHO05D011117 1.4e-37 159.5 88 90.9
PGSC0003DMG400039021 Solanum tuberosum HOM05D000963 ORTHO05D010201 6.8e-37 157.1 95 83.2
arahy.Tifrunner.gnm1.ann1.MJQ8WH Arachis hypogaea HOM05D000963 ORTHO05D011117 2.2e-35 152.1 88 87.5
unitig_91.g26528 Utricularia gibba HOM05D000963 ORTHO05D005131 6.6e-32 140.6 72 95.8
MELO3C028157.2 Cucumis melo HOM05D000963 ORTHO05D011117 8.6e-32 140.2 71 97.2
Sopen01g027140 Solanum pennellii HOM05D000963 ORTHO05D011117 4.0e-29 131.3 71 91.5
BcaB02g11354 Brassica carinata HOM05D000963 ORTHO05D011117 2.2e-27 125.6 67 92.5
EL10As6g23662 Beta vulgaris HOM05D001325 ORTHO05D001540 1.8e-26 122.5 61 98.4
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 1.8e-26 122.5 61 98.4
MELO3C028252.2 Cucumis melo HOM05D000963 ORTHO05D011117 1.6e-25 119.4 62 95.2
BcaNung01517 Brassica carinata HOM05D000963 ORTHO05D005131 1.3e-24 116.3 61 91.8
Migut.D01399 Erythranthe guttata HOM05D000963 ORTHO05D011117 1.1e-18 96.7 50 94.0
DCAR_001525 Daucus carota HOM05D000963 ORTHO05D005131 1.4e-18 96.3 51 92.2
arahy.Tifrunner.gnm1.ann1.H1VL0A Arachis hypogaea HOM05D000963 ORTHO05D011117 1.2e-17 93.2 66 72.7
TAR629G1823 Trochodendron aralioides HOM05D001041 ORTHO05D000846 3.5e-17 91.7 56 85.7
VMungo1024G0004 Vigna mungo HOM05D000963 ORTHO05D011117 7.8e-17 90.5 70 64.3
BraSC143t45648Z Brassica rapa HOM05D000963 ORTHO05D011117 4.3e-15 84.7 44 88.6
MELO3C030559.2 Cucumis melo HOM05D000963 ORTHO05D011117 7.3e-15 84.0 41 92.7
BcaC04g22599 Brassica carinata HOM05D000963 ORTHO05D011117 2.8e-14 82.0 41 92.7
EL10Ac6g15367 Beta vulgaris HOM05D000963 ORTHO05D011117 4.7e-14 81.3 79 63.3
PGSC0003DMG400036067 Solanum tuberosum HOM05D000963 ORTHO05D001540 1.1e-13 80.1 43 88.4
Gohir.D12G186150 Gossypium hirsutum HOM05D000963 ORTHO05D011117 3.1e-13 78.6 47 80.9
BraSC58t46452Z Brassica rapa HOM05D000963 ORTHO05D011117 5.2e-13 77.8 44 86.4
Hma1.2p1_0016F.1_g010990 Hydrangea macrophylla HOM05D000963 ORTHO05D011117 4.4e-12 74.7 43 83.7
Oeu012784.1 Olea europaea HOM05D000963 ORTHO05D005131 9.9e-12 73.6 43 81.4
BraSC138t45525Z Brassica rapa HOM05D000963 ORTHO05D011117 8.3e-11 70.5 41 85.4
Sc22g0004610 Simmondsia chinensis HOM05D000963 ORTHO05D011117 3.2e-10 68.6 42 81.0
arahy.Tifrunner.gnm1.ann1.NK9AGX Arachis hypogaea HOM05D000089 ORTHO05D011117 5.4e-10 67.8 38 89.5
Ca_03776_v3 Cicer arietinum L. HOM05D000963 ORTHO05D005131 4.6e-09 64.7 33 97.0
Ca_03777_v3 Cicer arietinum L. HOM05D000963 ORTHO05D005131 4.6e-09 64.7 33 97.0
Nitab4.5_0004841g0030 Nicotiana tabacum HOM05D000963 ORTHO05D005131 7.8e-09 63.9 44 65.9
SHI36891 Sapria himalayana HOM05D000963 ORTHO05D011117 3.3e-07 58.5 32 90.6
arahy.Tifrunner.gnm1.ann1.BMCQ1I Arachis hypogaea HOM05D000963 ORTHO05D005131 1.2e-06 56.6 33 84.8
Cfa023002 Carpinus fangiana HOM05D000963 ORTHO05D011117 1.6e-06 56.2 29 86.2


User provided reference genes

Program Settings