Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc27.74 Carica papaya HOM05D003782 ORTHO05D004361 4.2e-201 704.5 368 100.0
Thecc.06G191300 Theobroma cacao HOM05D003782 ORTHO05D004361 2.1e-128 463.0 369 68.8
Manes.16G025200 Manihot esculenta HOM05D003782 ORTHO05D004361 1.9e-124 449.9 371 67.1
COL.COLO4_31507 Corchorus olitorius HOM05D003782 ORTHO05D004361 6.0e-123 444.9 369 66.4
Manes.17G043000 Manihot esculenta HOM05D003782 ORTHO05D004361 8.7e-122 441.0 369 66.1
Atru.chr10.1947 Acer truncatum HOM05D003782 ORTHO05D004361 1.8e-119 433.3 383 63.7
Potri.011G049300 Populus trichocarpa HOM05D003782 ORTHO05D004361 1.5e-118 430.3 378 65.6
Duzib160G0524 Durio zibethinus HOM05D003782 ORTHO05D004361 2.2e-117 426.4 369 64.0
Gohir.D06G130600 Gossypium hirsutum HOM05D003782 ORTHO05D004361 1.4e-116 423.7 372 64.0
Gohir.A06G125300 Gossypium hirsutum HOM05D003782 ORTHO05D004361 7.9e-115 417.9 372 62.9
Gorai.010G152400 Gossypium raimondii HOM05D003782 ORTHO05D004361 7.9e-115 417.9 372 63.2
Dinv07533 Davidia involucrata HOM05D003782 ORTHO05D004361 1.5e-113 413.7 376 62.5
Haze_06504 Corylus avellana HOM05D003782 ORTHO05D004361 2.5e-113 412.9 370 65.4
Ciclev10014178m.g Citrus clementina HOM05D003782 ORTHO05D004361 9.7e-113 411.0 374 62.0
Gohir.A06G209800 Gossypium hirsutum HOM05D003782 ORTHO05D004361 2.2e-112 409.8 374 62.8
Cfa000411 Carpinus fangiana HOM05D003782 ORTHO05D004361 6.3e-112 408.3 370 64.6
Sabra11G0033700 Salix brachista HOM05D003782 ORTHO05D004361 1.8e-111 406.8 378 63.0
Gohir.D06G211200 Gossypium hirsutum HOM05D003782 ORTHO05D004361 2.4e-111 406.4 371 62.0
GSVIVG01006449001 Vitis vinifera HOM05D003782 ORTHO05D004361 4.1e-111 405.6 366 61.7
Gorai.010G255000 Gossypium raimondii HOM05D003782 ORTHO05D004361 6.9e-111 404.8 371 62.3
Potri.004G039900 Populus trichocarpa HOM05D003782 ORTHO05D004361 1.9e-108 396.7 370 61.4
QL05p039400 Quercus lobata HOM05D003782 ORTHO05D004361 6.1e-107 391.7 387 61.8
Hma1.2p1_0881F.1_g231940 Hydrangea macrophylla HOM05D003782 ORTHO05D004361 1.1e-105 387.5 384 57.8
CiPaw.09G056900 Carya illinoinensis HOM05D003782 ORTHO05D004361 9.7e-105 384.4 374 63.1
Psat7g113440 Pisum sativum HOM05D003782 ORTHO05D004361 2.8e-104 382.9 368 58.4
Sabra04G0024600 Salix brachista HOM05D003782 ORTHO05D004361 2.8e-104 382.9 370 60.5
TPR.G12054 Trifolium pratense HOM05D003782 ORTHO05D004361 2.4e-103 379.8 365 59.5
TWI38G1173 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 2.4e-103 379.8 367 61.9
Prupe.4G043300 Prunus persica HOM05D003782 ORTHO05D004361 4.1e-103 379.0 378 60.1
AL1G22040 Arabidopsis lyrata HOM05D003782 ORTHO05D004361 9.1e-103 377.9 367 57.5
Carub.0001s1062 Capsella rubella HOM05D003782 ORTHO05D004361 2.6e-102 376.3 367 58.0
Ca_18527_v3 Cicer arietinum L. HOM05D003782 ORTHO05D004361 2.6e-102 376.3 365 59.5
CARHR011250 Cardamine hirsuta HOM05D003782 ORTHO05D004361 1.3e-101 374.0 367 57.8
AT1G11060 Arabidopsis thaliana HOM05D003782 ORTHO05D004361 5.0e-101 372.1 367 56.9
Medtr4g089015 Medicago truncatula HOM05D003782 ORTHO05D004361 6.5e-101 371.7 364 57.1
Sed0005800 Sechium edule HOM05D003782 ORTHO05D004361 1.9e-100 370.2 369 57.2
Glyma.13G181800 Glycine max HOM05D003782 ORTHO05D004361 4.2e-100 369.0 370 58.1
VMungo0251G3691 Vigna mungo HOM05D003782 ORTHO05D004361 7.2e-100 368.2 372 57.8
Aa31LG1G3850 Aethionema arabicum HOM05D003782 ORTHO05D004361 9.4e-100 367.9 367 55.9
CSS0005863 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 4.7e-99 365.5 367 56.9
CSS0007425 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 4.7e-99 365.5 367 56.9
FvH4_3g04800 Fragaria vesca HOM05D003782 ORTHO05D004361 4.7e-99 365.5 379 58.0
Sp1g09750 Schrenkiella parvula HOM05D003782 ORTHO05D004361 6.1e-99 365.2 368 56.0
Phvul.002G226800 Phaseolus vulgaris HOM05D003782 ORTHO05D004361 8.0e-99 364.8 369 57.7
CsaV3_1G012120 Cucumis sativus L. HOM05D003782 ORTHO05D004361 1.0e-98 364.4 369 56.6
Thhalv10006765m.g Eutrema salsugineum HOM05D003782 ORTHO05D004361 1.0e-98 364.4 368 55.2
FAN21G1192 Fragaria x ananassa HOM05D003782 ORTHO05D004361 1.0e-98 364.4 379 57.8
FAN16G0824 Fragaria x ananassa HOM05D003782 ORTHO05D004361 1.4e-98 364.0 380 58.2
MD10G1297100 Malus domestica HOM05D003782 ORTHO05D004361 1.4e-98 364.0 382 60.5
ClCG03G005890 Citrullus lanatus HOM05D003782 ORTHO05D004361 2.3e-98 363.2 388 55.7
FAN25G2149 Fragaria x ananassa HOM05D003782 ORTHO05D004361 2.3e-98 363.2 380 58.4
vmacro03847 Vaccinium macrocarpon HOM05D003782 ORTHO05D004361 2.3e-98 363.2 382 55.5
CANSAT35G1194 Cannabis sativa HOM05D003782 ORTHO05D004361 3.0e-98 362.8 381 58.3
PGR042G3934 Punica granatum HOM05D003782 ORTHO05D004361 3.0e-98 362.8 370 57.6
Actinidia05612 Actinidia chinensis HOM05D003782 ORTHO05D004361 8.8e-98 361.3 370 55.9
arahy.Tifrunner.gnm1.ann1.1A97AW Arachis hypogaea HOM05D003782 ORTHO05D004361 2.0e-97 360.1 368 57.3
Lalb_Chr05g0218361 Lupinus albus HOM05D003782 ORTHO05D004361 2.0e-97 360.1 377 56.5
arahy.Tifrunner.gnm1.ann1.2GZF7Z Arachis hypogaea HOM05D003782 ORTHO05D004361 2.6e-97 359.8 368 57.3
FAN11G2511 Fragaria x ananassa HOM05D003782 ORTHO05D004361 2.6e-97 359.8 381 57.2
Lj4g0027811 Lotus japonicus HOM05D003782 ORTHO05D004361 2.6e-97 359.8 377 55.7
MD05G1316600 Malus domestica HOM05D003782 ORTHO05D004361 2.6e-97 359.8 375 57.9
Glyma.07G194500 Glycine max HOM05D003782 ORTHO05D004361 2.2e-96 356.7 370 57.3
Lj1C1208G1 Lonicera japonica HOM05D003782 ORTHO05D004361 2.4e-95 353.2 386 55.7
RcHm_v2.0_Chr5g0007891 Rosa chinensis HOM05D003782 ORTHO05D004361 3.5e-94 349.4 381 57.2
Lalb_Chr09g0327561 Lupinus albus HOM05D003782 ORTHO05D004361 4.5e-94 349.0 378 55.0
A06p07760 Brassica napus HOM05D003782 ORTHO05D004361 7.7e-94 348.2 368 54.1
BraA06t23977Z Brassica rapa HOM05D003782 ORTHO05D004361 7.7e-94 348.2 368 54.1
BolC5t29675H Brassica oleracea HOM05D003782 ORTHO05D004361 8.5e-93 344.7 368 53.5
C08p48360 Brassica napus HOM05D003782 ORTHO05D004361 1.5e-92 344.0 368 53.3
BolC8t52375H Brassica oleracea HOM05D003782 ORTHO05D004361 1.5e-92 344.0 368 53.3
Lsat_1_v5_gn_7_19080 Lactuca sativa HOM05D003782 ORTHO05D004361 1.9e-92 343.6 379 54.4
Nitab4.5_0011233g0010 Nicotiana tabacum HOM05D003782 ORTHO05D004361 1.9e-92 343.6 405 50.9
Eucgr.E03352 Eucalyptus grandis HOM05D003782 ORTHO05D004361 2.5e-92 343.2 378 53.2
C05p09350 Brassica napus HOM05D003782 ORTHO05D004361 3.2e-92 342.8 368 53.3
Dinv40534 Davidia involucrata HOM05D003782 ORTHO05D004361 7.2e-92 341.7 244 68.9
CAN.G1627.12 Capsicum annuum HOM05D003782 ORTHO05D004361 1.2e-91 340.9 419 51.1
RhsimUnG0044200 Rhododendron simsii HOM05D003782 ORTHO05D004361 3.6e-91 339.3 411 50.6
MBI17_g03751_MAGBIO Magnolia biondii HOM05D003782 ORTHO05D004361 1.4e-90 337.4 366 54.1
TAR624G0538 Trochodendron aralioides HOM05D003782 ORTHO05D003724 1.4e-90 337.4 264 66.3
Sc05g0007840 Simmondsia chinensis HOM05D003782 ORTHO05D004361 1.8e-90 337.0 368 56.5
Sp2g03490 Schrenkiella parvula HOM05D003782 ORTHO05D004361 2.3e-90 336.7 365 53.4
Sopen02g023410 Solanum pennellii HOM05D003782 ORTHO05D004361 8.8e-90 334.7 424 48.6
Nitab4.5_0003668g0120 Nicotiana tabacum HOM05D003782 ORTHO05D004361 1.2e-89 334.3 397 51.4
Cc02_g13030 Coffea canephora HOM05D003782 ORTHO05D004361 1.5e-89 334.0 366 54.1
Hund23698 Selenicereus undatus HOM05D003782 ORTHO05D004361 2.0e-89 333.6 361 55.4
Migut.H01508 Erythranthe guttata HOM05D003782 ORTHO05D004361 9.7e-89 331.3 314 57.6
CiPaw.10G046700 Carya illinoinensis HOM05D003782 ORTHO05D004361 8.2e-88 328.2 240 70.8
Solyc02g078560.4 Solanum lycopersicum HOM05D003782 ORTHO05D004361 2.4e-87 326.6 244 66.8
PSO210G1870 Papaver somniferum HOM05D003782 ORTHO05D004361 3.1e-87 326.2 374 52.7
Aqoxy4G01073 Aquilegia oxysepala HOM05D003782 ORTHO05D004361 4.1e-87 325.9 370 52.4
BcaC05g24980 Brassica carinata HOM05D003782 ORTHO05D004361 4.1e-87 325.9 244 66.0
HanXRQChr08g0209481 Helianthus annuus HOM05D003782 ORTHO05D004361 1.2e-86 324.3 368 50.8
Oeu014694.1 Olea europaea HOM05D003782 ORTHO05D004361 7.7e-86 321.6 285 58.6
Peaxi162Scf00379g00065 Petunia axillaris HOM05D003782 ORTHO05D004361 1.0e-85 321.2 373 51.5
AL2G15410 Arabidopsis lyrata HOM05D003782 ORTHO05D004361 1.7e-85 320.5 369 52.6
BraA09t41812Z Brassica rapa HOM05D003782 ORTHO05D004361 2.9e-85 319.7 434 46.3
CDE02G2556 Ceratophyllum demersum HOM05D003782 ORTHO05D004361 6.5e-85 318.5 370 51.4
MELO3C002586.2 Cucumis melo HOM05D003782 ORTHO05D004361 6.5e-85 318.5 420 48.6
A09p64830 Brassica napus HOM05D003782 ORTHO05D004361 2.5e-84 316.6 434 46.1
MSTRG.14684 Avicennia marina HOM05D003782 ORTHO05D004361 5.5e-84 315.5 335 52.5
HanXRQChr04g0124181 Helianthus annuus HOM05D003782 ORTHO05D004361 1.6e-83 313.9 376 50.3
AT1G61030 Arabidopsis thaliana HOM05D003782 ORTHO05D004361 2.7e-83 313.2 368 52.2
PSO832G0898 Papaver somniferum HOM05D003782 ORTHO05D004361 4.7e-83 312.4 372 50.5
BcaC07g41789 Brassica carinata HOM05D003782 ORTHO05D004361 6.8e-82 308.5 366 50.8
Aa31LG2G9560 Aethionema arabicum HOM05D003782 ORTHO05D004361 2.6e-81 306.6 367 50.7
AUR62014785 Chenopodium quinoa HOM05D003782 ORTHO05D004361 2.6e-81 306.6 276 57.6
AUR62016973 Chenopodium quinoa HOM05D003782 ORTHO05D004361 4.4e-81 305.8 249 61.8
DCAR_008048 Daucus carota HOM05D003782 ORTHO05D004361 9.8e-81 304.7 425 45.6
CARHR052160 Cardamine hirsuta HOM05D003782 ORTHO05D004361 1.3e-80 304.3 366 48.9
Carub.0002s0417 Capsella rubella HOM05D003782 ORTHO05D004361 2.0e-78 297.0 354 50.0
ATR0680G033 Amborella trichopoda HOM05D003782 ORTHO05D004361 2.7e-78 296.6 382 46.6
SalBow7G0271 Salvia bowleyana HOM05D003782 ORTHO05D004361 7.7e-78 295.0 255 59.6
SalBow7G0940 Salvia bowleyana HOM05D003782 ORTHO05D004361 7.7e-78 295.0 255 59.6
SGA_v2.0_scaffold49G18282 Striga asiatica HOM05D003782 ORTHO05D004361 1.1e-76 291.2 364 49.7
Ah.14g089260 Amaranthus hybridus HOM05D003782 ORTHO05D004361 5.5e-76 288.9 381 47.8
Sed0026382 Sechium edule HOM05D003782 ORTHO05D004361 1.6e-75 287.3 356 50.3
unitig_26.g9369 Utricularia gibba HOM05D003782 ORTHO05D004361 6.1e-75 285.4 446 43.5
arahy.Tifrunner.gnm1.ann1.HPML60 Arachis hypogaea HOM05D003782 ORTHO05D004361 4.0e-74 282.7 308 52.9
EL10Ac8g20337 Beta vulgaris HOM05D003782 ORTHO05D004361 1.2e-73 281.2 389 47.0
FAN07G0886 Fragaria x ananassa HOM05D003782 ORTHO05D004361 4.4e-73 279.3 242 61.2
HPP92_014533 Vanilla planifolia HOM05D003782 ORTHO05D004361 2.2e-72 276.9 377 47.5
arahy.Tifrunner.gnm1.ann1.AS4EHM Arachis hypogaea HOM05D003782 ORTHO05D004361 4.9e-72 275.8 309 52.1
SHI01818 Sapria himalayana HOM05D003782 ORTHO05D004361 3.1e-71 273.1 482 41.1
Lj6g0013812 Lotus japonicus HOM05D003782 ORTHO05D004361 9.2e-71 271.6 240 58.3
SalBow8G2382 Salvia bowleyana HOM05D003782 ORTHO05D004361 7.3e-68 261.9 310 51.0
Ah.09g235740 Amaranthus hybridus HOM05D003782 ORTHO05D004361 2.8e-67 260.0 382 45.5
Lalb_Chr20g0122011 Lupinus albus HOM05D003782 ORTHO05D004361 4.4e-65 252.7 228 60.1
Os10g0497000 Oryza sativa ssp. japonica HOM05D003782 ORTHO05D004361 3.7e-64 249.6 243 51.4
Zm00001eb220930 Zea mays HOM05D003782 ORTHO05D004361 4.1e-63 246.1 244 51.2
Duzib192G0241 Durio zibethinus HOM05D003782 ORTHO05D004361 3.3e-60 236.5 228 60.5
Duzib235G1248 Durio zibethinus HOM05D003782 ORTHO05D004361 6.8e-58 228.8 259 56.0
Mapoly0014s0099 Marchantia polymorpha HOM05D003782 ORTHO05D004361 6.0e-54 215.7 439 39.9
Migut.M01185 Erythranthe guttata HOM05D003782 ORTHO05D004361 5.1e-53 212.6 230 52.2
Lj6g0027699 Lotus japonicus HOM05D003782 ORTHO05D004361 3.3e-52 209.9 185 57.3
Pp3c9_20340 Physcomitrium patens HOM05D003782 ORTHO05D004361 2.9e-48 196.8 403 37.7
Pp3c9_20349 Physcomitrium patens HOM05D003782 ORTHO05D004361 2.9e-48 196.8 403 37.7
SMO169G0190 Selaginella moellendorffii HOM05D003782 ORTHO05D004361 4.7e-43 179.5 362 36.5
CBR_g19729 Chara braunii HOM05D003782 ORTHO05D004361 3.8e-40 169.9 260 38.5
BcaC05g24978 Brassica carinata HOM05D003782 ORTHO05D004361 7.3e-36 155.6 217 50.7
ECA236G3594 Erigeron canadensis HOM05D003782 ORTHO05D004361 6.2e-35 152.5 241 46.5
FAN28G2813 Fragaria x ananassa HOM05D003782 ORTHO05D004361 2.6e-33 147.1 143 61.5
Zm00001eb006190 Zea mays HOM05D003782 ORTHO05D004361 3.0e-29 133.7 157 43.9
Zm00001eb044640 Zea mays HOM05D003782 ORTHO05D004361 8.4e-24 115.5 104 51.0
VMungo0331G2027 Vigna mungo HOM05D003782 ORTHO05D004361 9.6e-20 102.1 72 73.6
VMungo0251G1485 Vigna mungo HOM05D003782 ORTHO05D004361 2.1e-19 100.9 63 81.0
Zm00001eb432110 Zea mays HOM05D003782 ORTHO05D004361 3.7e-19 100.1 89 57.3
QL05p013418 Quercus lobata HOM05D003782 ORTHO05D004361 2.4e-18 97.4 57 87.7
Zm00001eb335960 Zea mays HOM05D003782 ORTHO05D004361 3.1e-18 97.1 118 44.1
MD09G1213100 Malus domestica HOM05D003782 ORTHO05D004361 9.0e-18 95.5 113 45.1
SEGI_13110 Sequoiadendron giganteum HOM05D003782 ORTHO05D004361 9.0e-18 95.5 99 46.5
Zm00001eb179180 Zea mays HOM05D003782 ORTHO05D004361 1.5e-17 94.7 89 55.1
CARHR034020 Cardamine hirsuta HOM05D003782 ORTHO05D004361 2.0e-17 94.4 92 57.6
Glyma.04G160500 Glycine max HOM05D003782 ORTHO05D004361 4.9e-16 89.7 113 48.7
TAR626G0244 Trochodendron aralioides HOM05D003782 ORTHO05D004361 8.4e-16 89.0 69 60.9
arahy.Tifrunner.gnm1.ann1.04J95Q Arachis hypogaea HOM05D003782 ORTHO05D004361 9.3e-15 85.5 59 67.8
arahy.Tifrunner.gnm1.ann1.R5EEB5 Arachis hypogaea HOM05D003782 ORTHO05D004361 1.6e-14 84.7 59 67.8
Zm00001eb174580 Zea mays HOM05D003782 ORTHO05D004361 3.1e-10 70.5 66 50.0
Zm00001eb208870 Zea mays HOM05D000229 ORTHO05D004361 4.0e-10 70.1 126 37.3
QL11p045598 Quercus lobata HOM05D005703 ORTHO05D006643 3.4e-09 67.0 44 79.5
CSS0046083 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 2.2e-08 64.3 150 38.0
Zm00001eb032810 Zea mays HOM05D003782 ORTHO05D004361 2.5e-07 60.8 60 50.0
Zm00001eb274810 Zea mays HOM05D003782 ORTHO05D004361 2.5e-07 60.8 55 56.4
TAR624G1003 Trochodendron aralioides HOM05D003782 ORTHO05D004361 4.6e-06 56.6 100 47.0


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