Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc27.216 Carica papaya HOM05D005075 ORTHO05D007097 0.0e+00 1425.2 716 100.0
QL03p054705 Quercus lobata HOM05D005075 ORTHO05D007097 3.8e-307 1057.7 720 73.6
COL.COLO4_23627 Corchorus olitorius HOM05D005075 ORTHO05D007097 1.5e-298 1029.2 714 70.9
Prupe.1G232900 Prunus persica HOM05D005075 ORTHO05D007097 9.5e-298 1026.5 716 71.6
Haze_12371 Corylus avellana HOM05D005075 ORTHO05D007097 4.0e-296 1021.1 686 73.6
MD13G1113200 Malus domestica HOM05D005075 ORTHO05D007097 5.2e-296 1020.8 714 70.7
Gorai.005G171200 Gossypium raimondii HOM05D005075 ORTHO05D007097 3.4e-295 1018.1 715 70.2
TWI18G0401 Tripterygium wilfordii HOM05D005075 ORTHO05D007097 1.7e-294 1015.8 715 71.5
CANSAT01G2132 Cannabis sativa HOM05D005075 ORTHO05D007097 2.8e-294 1015.0 713 70.1
FvH4_4g24220 Fragaria vesca HOM05D005075 ORTHO05D007097 8.3e-294 1013.4 717 69.7
Gohir.A03G128400 Gossypium hirsutum HOM05D005075 ORTHO05D007097 4.1e-293 1011.1 715 69.7
FAN07G0914 Fragaria x ananassa HOM05D005075 ORTHO05D007097 1.2e-292 1009.6 742 68.1
Thecc.02G274600 Theobroma cacao HOM05D005075 ORTHO05D007097 1.3e-291 1006.1 716 69.6
Ciclev10030830m.g Citrus clementina HOM05D005075 ORTHO05D007097 1.2e-289 999.6 718 70.1
GSVIVG01010340001 Vitis vinifera HOM05D005075 ORTHO05D007097 2.1e-289 998.8 713 69.6
CSS0028948 Camellia sinensis var. sinensis HOM05D005075 ORTHO05D007097 2.8e-289 998.4 721 69.8
Hma1.2p1_0167F.1_g073740 Hydrangea macrophylla HOM05D005075 ORTHO05D007097 9.8e-287 989.9 709 68.7
THA.LOC104799053 Tarenaya hassleriana HOM05D005075 ORTHO05D007097 2.2e-286 988.8 712 68.7
FAN12G0151 Fragaria x ananassa HOM05D005075 ORTHO05D007097 1.9e-285 985.7 780 64.1
Sabra08G0136200 Salix brachista HOM05D005075 ORTHO05D007097 1.9e-285 985.7 757 67.1
RcHm_v2.0_Chr4g0431061 Rosa chinensis HOM05D005075 ORTHO05D007097 1.3e-283 979.5 714 68.9
Lj3A1065G86 Lonicera japonica HOM05D005075 ORTHO05D007097 7.3e-282 973.8 723 67.5
AT1G24340 Arabidopsis thaliana HOM05D005075 ORTHO05D007097 1.6e-281 972.6 713 67.5
Thhalv10006951m.g Eutrema salsugineum HOM05D005075 ORTHO05D007097 2.8e-281 971.8 710 67.5
Carub.0001s2573 Capsella rubella HOM05D005075 ORTHO05D007097 4.0e-280 968.0 712 67.0
Rhsim12G0029800 Rhododendron simsii HOM05D005075 ORTHO05D007097 6.8e-280 967.2 751 65.2
CARHR026760 Cardamine hirsuta HOM05D005075 ORTHO05D007097 2.6e-279 965.3 712 67.6
AL6G39900 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 4.9e-278 961.1 713 66.6
A07p12060 Brassica napus HOM05D005075 ORTHO05D007097 3.2e-277 958.4 712 66.6
Nn4g22400 Nelumbo nucifera HOM05D005075 ORTHO05D007097 3.2e-277 958.4 718 67.0
BraA07t28994Z Brassica rapa HOM05D005075 ORTHO05D007097 2.1e-276 955.7 712 66.3
Dinv14804 Davidia involucrata HOM05D005075 ORTHO05D007097 2.1e-276 955.7 714 66.8
AL1G40580 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 2.7e-276 955.3 713 66.3
BolC7t42310H Brassica oleracea HOM05D005075 ORTHO05D007097 3.5e-276 954.9 712 65.9
C07p18000 Brassica napus HOM05D005075 ORTHO05D007097 6.0e-276 954.1 712 65.7
PGR119G0347 Punica granatum HOM05D005075 ORTHO05D007097 7.8e-276 953.7 717 66.4
BcaC06g35258 Brassica carinata HOM05D005075 ORTHO05D007097 3.9e-275 951.4 712 65.4
Sp1g23430 Schrenkiella parvula HOM05D005075 ORTHO05D007097 6.6e-275 950.7 699 67.2
Glyma.11G248400 Glycine max HOM05D005075 ORTHO05D007097 1.5e-274 949.5 717 66.2
Aqoxy3G01457 Aquilegia oxysepala HOM05D005075 ORTHO05D007097 2.5e-274 948.7 672 69.5
Carub.0007s3241 Capsella rubella HOM05D005075 ORTHO05D007097 4.3e-274 948.0 712 65.9
Lj3g0026022 Lotus japonicus HOM05D005075 ORTHO05D007097 7.3e-274 947.2 711 65.7
DCAR_024086 Daucus carota HOM05D005075 ORTHO05D007097 9.5e-274 946.8 673 68.2
Phvul.001G259800 Phaseolus vulgaris HOM05D005075 ORTHO05D007097 1.2e-273 946.4 715 66.6
Eucgr.H04663 Eucalyptus grandis HOM05D005075 ORTHO05D007097 6.2e-273 944.1 666 68.3
Ca_16480_v3 Cicer arietinum L. HOM05D005075 ORTHO05D007097 8.1e-273 943.7 713 65.9
MBI08_g36442_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D007097 1.4e-272 943.0 693 66.7
MELO3C018283.2 Cucumis melo HOM05D005075 ORTHO05D007097 6.8e-272 940.6 713 65.6
arahy.Tifrunner.gnm1.ann1.S726NC Arachis hypogaea HOM05D005075 ORTHO05D007097 4.1e-269 931.4 712 65.3
Lalb_Chr23g0277981 Lupinus albus HOM05D005075 ORTHO05D007097 4.1e-269 931.4 714 65.7
PSO782G5362 Papaver somniferum HOM05D005075 ORTHO05D007097 7.1e-269 930.6 716 64.7
VMungo1383G1024 Vigna mungo HOM05D005075 ORTHO05D007097 2.1e-268 929.1 712 65.6
Psat5g094520 Pisum sativum HOM05D005075 ORTHO05D007097 4.6e-268 927.9 712 64.3
Medtr3g085660 Medicago truncatula HOM05D005075 ORTHO05D007097 2.3e-267 925.6 740 62.8
Aa31LG7G9750 Aethionema arabicum HOM05D005075 ORTHO05D007097 1.1e-266 923.3 678 67.1
ClCG06G008480 Citrullus lanatus HOM05D005075 ORTHO05D007097 4.3e-266 921.4 705 65.0
CsaV3_5G015350 Cucumis sativus L. HOM05D005075 ORTHO05D007097 9.6e-266 920.2 713 64.4
HanXRQChr08g0233581 Helianthus annuus HOM05D005075 ORTHO05D007097 2.1e-265 919.1 715 65.6
Sed0000829 Sechium edule HOM05D005075 ORTHO05D007097 3.6e-265 918.3 712 64.6
vmacro01083 Vaccinium macrocarpon HOM05D005075 ORTHO05D007097 6.2e-265 917.5 772 61.1
Cc11_g16630 Coffea canephora HOM05D005075 ORTHO05D007097 1.8e-264 916.0 711 62.9
Nitab4.5_0002129g0120 Nicotiana tabacum HOM05D005075 ORTHO05D007097 6.8e-264 914.1 713 64.2
TPR.G22444 Trifolium pratense HOM05D005075 ORTHO05D007097 2.2e-262 909.1 714 63.6
PGSC0003DMG400022618 Solanum tuberosum HOM05D005075 ORTHO05D007097 3.8e-262 908.3 713 63.1
Potri.008G178400 Populus trichocarpa HOM05D005075 ORTHO05D007097 4.9e-262 907.9 618 72.2
Solyc05g006810.4 Solanum lycopersicum HOM05D005075 ORTHO05D007097 8.4e-262 907.1 681 65.2
Oeu056679.1 Olea europaea HOM05D005075 ORTHO05D007097 2.4e-261 905.6 710 63.8
arahy.Tifrunner.gnm1.ann1.I0S54J Arachis hypogaea HOM05D005075 ORTHO05D007097 2.1e-260 902.5 712 63.9
ECA233G3670 Erigeron canadensis HOM05D005075 ORTHO05D007097 7.8e-260 900.6 657 67.1
Migut.K00700 Erythranthe guttata HOM05D005075 ORTHO05D007097 3.3e-258 895.2 719 61.2
Nitab4.5_0000537g0120 Nicotiana tabacum HOM05D005075 ORTHO05D007097 3.3e-258 895.2 742 61.5
SalBow1G5463 Salvia bowleyana HOM05D005075 ORTHO05D007097 1.6e-252 876.3 731 60.7
SalBow1G4350 Salvia bowleyana HOM05D005075 ORTHO05D007097 1.0e-251 873.6 731 60.6
Manes.13G016100 Manihot esculenta HOM05D005075 ORTHO05D007097 3.0e-251 872.1 713 63.5
EL10Ac6g13442 Beta vulgaris HOM05D005075 ORTHO05D007097 1.3e-249 866.7 672 64.3
Nitab4.5_0001802g0060 Nicotiana tabacum HOM05D005075 ORTHO05D007097 2.1e-249 865.9 713 61.7
Hund25442 Selenicereus undatus HOM05D005075 ORTHO05D007097 1.4e-248 863.2 653 65.1
Peaxi162Scf00804g00120 Petunia axillaris HOM05D005075 ORTHO05D007097 5.3e-248 861.3 708 61.2
AUR62005575 Chenopodium quinoa HOM05D005075 ORTHO05D007097 3.7e-241 838.6 716 59.9
ATR0824G188 Amborella trichopoda HOM05D005075 ORTHO05D007097 4.0e-240 835.1 706 59.1
SGA_v2.0_scaffold14G07137 Striga asiatica HOM05D005075 ORTHO05D007097 1.5e-239 833.2 714 57.6
Zm00001eb014870 Zea mays HOM05D005075 ORTHO05D007097 2.3e-235 819.3 677 59.8
Duzib251G0605 Durio zibethinus HOM05D005075 ORTHO05D007097 1.2e-231 807.0 716 59.2
Sc11g0000650 Simmondsia chinensis HOM05D005075 ORTHO05D007097 2.0e-231 806.2 537 73.2
PSO063G5600 Papaver somniferum HOM05D005075 ORTHO05D007097 6.1e-228 794.7 624 63.5
Peaxi162Scf00634g00011 Petunia axillaris HOM05D005075 ORTHO05D007097 5.1e-227 791.6 684 59.1
Cfa009316 Carpinus fangiana HOM05D005075 ORTHO05D007097 7.4e-226 787.7 499 77.6
TAR374G0458 Trochodendron aralioides HOM05D005075 ORTHO05D007097 8.2e-225 784.3 524 73.5
Lsat_1_v5_gn_8_149841 Lactuca sativa HOM05D005075 ORTHO05D007097 2.0e-223 779.6 1007 45.1
AUR62024155 Chenopodium quinoa HOM05D005075 ORTHO05D007097 3.3e-218 762.3 635 60.9
Gohir.D02G152200 Gossypium hirsutum HOM05D005075 ORTHO05D007097 1.8e-216 756.5 521 71.2
Sopen05g002750 Solanum pennellii HOM05D005075 ORTHO05D007097 1.0e-214 750.7 578 63.8
CDE02G1220 Ceratophyllum demersum HOM05D005075 ORTHO05D007097 1.1e-213 747.3 688 55.8
Ah.03g133860 Amaranthus hybridus HOM05D005075 ORTHO05D007097 4.5e-199 698.7 679 54.5
SHI17941 Sapria himalayana HOM05D005075 ORTHO05D007097 2.4e-192 676.4 639 56.2
unitig_747.g21130 Utricularia gibba HOM05D005075 ORTHO05D007097 6.1e-188 661.8 581 57.0
Glyma.18G008800 Glycine max HOM05D005075 ORTHO05D007097 4.4e-178 629.0 432 70.6
Mapoly0042s0063 Marchantia polymorpha HOM05D005075 ORTHO05D007097 1.1e-176 624.4 654 48.6
SMO356G0356 Selaginella moellendorffii HOM05D005075 ORTHO05D007097 1.5e-173 614.0 690 47.8
CiPaw.05G114700 Carya illinoinensis HOM05D005075 ORTHO05D007097 2.8e-156 556.6 366 73.0
SEGI_08672 Sequoiadendron giganteum HOM05D005075 ORTHO05D007097 4.3e-149 532.7 422 60.2
HPP92_001259 Vanilla planifolia HOM05D005075 ORTHO05D007097 4.0e-139 499.6 395 61.0
Pp3c26_6380 Physcomitrium patens HOM05D005075 ORTHO05D007097 2.1e-127 460.7 499 46.7
CAN.G2246.1 Capsicum annuum HOM05D005075 ORTHO05D007097 4.0e-123 446.4 397 57.7
TPR.G9414 Trifolium pratense HOM05D005075 ORTHO05D007097 6.5e-121 439.1 385 58.2
TPR.G492 Trifolium pratense HOM05D005075 ORTHO05D007097 2.8e-116 423.7 329 63.5
AagrBONN_evm.TU.Sc2ySwM_228.4178 Anthoceros agrestis HOM05D005075 ORTHO05D007097 1.0e-110 405.2 444 48.6
HPP92_001244 Vanilla planifolia HOM05D005075 ORTHO05D007097 3.2e-104 383.6 316 59.2
Os01g0901700 Oryza sativa ssp. japonica HOM05D005075 ORTHO05D007097 2.2e-100 370.9 277 65.0
Actinidia08085 Actinidia chinensis HOM05D005075 ORTHO05D007097 2.8e-100 370.5 321 59.8
CiPaw.05G114800 Carya illinoinensis HOM05D005075 ORTHO05D007097 1.4e-99 368.2 286 67.1
MCO06G130 Micromonas commoda HOM05D005075 ORTHO05D007097 7.7e-98 362.5 748 34.6
SEGI_28928 Sequoiadendron giganteum HOM05D005075 ORTHO05D007097 2.7e-87 327.4 360 50.0
PGSC0003DMG400021087 Solanum tuberosum HOM05D005075 ORTHO05D007097 4.5e-82 310.1 239 61.1
Haze_02705 Corylus avellana HOM05D005075 ORTHO05D007097 2.1e-79 301.2 233 63.1
CBR_g21048 Chara braunii HOM05D000019 ORTHO05D000002 5.0e-73 280.0 385 40.5
HPP92_001258 Vanilla planifolia HOM05D005075 ORTHO05D007097 8.8e-70 269.2 285 51.2
Cre14.g630895 Chlamydomonas reinhardtii HOM05D005075 ORTHO05D007097 9.8e-69 265.8 656 32.2
Atru.chr11.2265 Acer truncatum HOM05D005075 ORTHO05D007097 7.0e-67 259.6 432 39.1
PRCOL_00001291 Prasinoderma coloniale HOM05D005075 ORTHO05D007097 5.4e-59 233.4 588 30.1
Atru.chr12.1465 Acer truncatum HOM05D005075 ORTHO05D007097 3.4e-45 187.6 356 38.5
Atru.chr11.2253 Acer truncatum HOM05D005075 ORTHO05D007097 2.4e-43 181.4 285 39.6
CAN.G27.28 Capsicum annuum HOM05D005075 ORTHO05D007097 5.6e-40 170.2 110 72.7
MBI07_g43659_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D007097 6.2e-39 166.8 137 57.7
Actinidia30671 Actinidia chinensis HOM05D005075 ORTHO05D007097 2.2e-36 158.3 111 74.8
MBI05_g16127_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D007097 2.1e-34 151.8 215 40.5
MD16G1112300 Malus domestica HOM05D005075 ORTHO05D007097 2.1e-34 151.8 103 74.8
MBI18_g19470_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D007097 2.3e-33 148.3 223 38.6
MBI18_g03939_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 1.6e-31 142.1 220 38.6
Actinidia30670 Actinidia chinensis HOM05D005075 ORTHO05D007097 2.1e-26 125.2 125 52.0
Atru.chr11.2251 Acer truncatum HOM05D005075 ORTHO05D007097 1.4e-22 112.5 87 63.2
AagrBONN_evm.TU.Sc2ySwM_228.4177 Anthoceros agrestis HOM05D005075 ORTHO05D007097 5.3e-22 110.5 83 63.9
Cfa026038 Carpinus fangiana HOM05D005075 ORTHO05D007097 1.9e-16 92.0 135 37.8
COL.COLO4_15613 Corchorus olitorius HOM05D005075 ORTHO05D162910 1.9e-16 92.0 432 24.1
MD16G1112400 Malus domestica HOM05D005075 ORTHO05D007097 9.6e-16 89.7 151 41.1
MBI16_g25874_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 1.8e-14 85.5 64 59.4
MBI13_g10206_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 9.0e-14 83.2 46 73.9
MBI18_g33166_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 2.0e-13 82.0 53 62.3
MBI18_g47010_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 3.4e-13 81.3 46 71.7
MBI18_g06981_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 3.8e-12 77.8 46 69.6
HPP92_001243 Vanilla planifolia HOM05D005075 ORTHO05D007097 8.4e-12 76.6 92 41.3
MBI18_g03943_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 1.4e-11 75.9 101 42.6
MD16G1112100 Malus domestica HOM05D005075 ORTHO05D037935 1.4e-11 75.9 60 65.0
Cfa026189 Carpinus fangiana HOM05D002287 ORTHO05D123242 3.2e-11 74.7 58 56.9
Cfa025560 Carpinus fangiana HOM05D005075 ORTHO05D122628 1.1e-08 66.2 68 47.1
Sabra10G0048500 Salix brachista HOM05D005075 ORTHO05D007097 1.1e-08 66.2 39 76.9
Atru.chr11.2270 Acer truncatum HOM05D005075 ORTHO05D037935 6.2e-07 60.5 53 56.6


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