Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc27.182 Carica papaya HOM05D004525 ORTHO05D005295 1.3e-97 359.8 192 100.0
Thecc.03G220900 Theobroma cacao HOM05D004525 ORTHO05D005295 6.7e-81 304.3 192 85.4
Duzib068G1021 Durio zibethinus HOM05D004525 ORTHO05D005295 5.6e-80 301.2 192 83.9
Gohir.A12G240200 Gossypium hirsutum HOM05D004525 ORTHO05D005295 6.2e-79 297.7 192 83.3
Ciclev10022441m.g Citrus clementina HOM05D004525 ORTHO05D005295 1.1e-78 297.0 183 86.3
Atru.chr9.1879 Acer truncatum HOM05D004525 ORTHO05D005295 2.4e-78 295.8 193 83.4
MD06G1119500 Malus domestica HOM05D004525 ORTHO05D005295 4.0e-78 295.0 192 82.8
Duzib205G1187 Durio zibethinus HOM05D004525 ORTHO05D005295 6.9e-78 294.3 181 86.7
CiPaw.11G112000 Carya illinoinensis HOM05D004525 ORTHO05D005295 1.2e-77 293.5 193 83.4
COL.COLO4_10799 Corchorus olitorius HOM05D004525 ORTHO05D005295 2.6e-77 292.4 190 82.6
MD14G1136300 Malus domestica HOM05D004525 ORTHO05D005295 3.4e-77 292.0 192 81.2
Potri.001G083801 Populus trichocarpa HOM05D004525 ORTHO05D005295 3.4e-77 292.0 192 81.8
Gorai.008G258800 Gossypium raimondii HOM05D004525 ORTHO05D005295 5.8e-77 291.2 192 81.8
QL12p036922 Quercus lobata HOM05D004525 ORTHO05D005295 5.8e-77 291.2 191 81.2
Manes.09G101000 Manihot esculenta HOM05D004525 ORTHO05D005295 7.6e-77 290.8 192 82.8
Gohir.D12G241500 Gossypium hirsutum HOM05D004525 ORTHO05D005295 1.7e-76 289.7 192 81.2
FvH4_4g11450 Fragaria vesca HOM05D004525 ORTHO05D005295 2.2e-76 289.3 192 79.2
QL02p027997 Quercus lobata HOM05D004525 ORTHO05D005295 3.8e-76 288.5 191 80.1
Cfa006748 Carpinus fangiana HOM05D004525 ORTHO05D005295 4.9e-76 288.1 186 82.8
FAN07G0034 Fragaria x ananassa HOM05D004525 ORTHO05D005295 4.9e-76 288.1 192 78.6
RcHm_v2.0_Chr1g0332661 Rosa chinensis HOM05D004525 ORTHO05D005295 4.9e-76 288.1 192 79.7
Cfa011920 Carpinus fangiana HOM05D004525 ORTHO05D005295 1.4e-75 286.6 187 82.4
THA.LOC104809303 Tarenaya hassleriana HOM05D004525 ORTHO05D005295 1.4e-75 286.6 188 81.9
GSVIVG01019654001 Vitis vinifera HOM05D004525 ORTHO05D005295 2.4e-75 285.8 195 79.5
Haze_04010 Corylus avellana HOM05D004525 ORTHO05D005295 4.2e-75 285.0 186 82.3
RcHm_v2.0_Chr6g0273561 Rosa chinensis HOM05D004525 ORTHO05D005295 7.1e-75 284.3 192 78.6
Lsat_1_v5_gn_3_14420 Lactuca sativa HOM05D004525 ORTHO05D005295 9.3e-75 283.9 199 77.9
PGR031G2275 Punica granatum HOM05D004525 ORTHO05D005295 9.3e-75 283.9 192 78.6
Sabra01G0060700 Salix brachista HOM05D004525 ORTHO05D005295 9.3e-75 283.9 190 80.5
TWI56G0194 Tripterygium wilfordii HOM05D004525 ORTHO05D005295 2.1e-74 282.7 192 79.7
Prupe.2G307200 Prunus persica HOM05D004525 ORTHO05D005295 7.9e-74 280.8 190 80.0
CiPaw.12G077100 Carya illinoinensis HOM05D004525 ORTHO05D005295 2.3e-73 279.3 192 78.1
HanXRQChr17g0534221 Helianthus annuus HOM05D004525 ORTHO05D005295 3.0e-73 278.9 196 76.5
Potri.003G146900 Populus trichocarpa HOM05D004525 ORTHO05D005295 3.0e-73 278.9 190 80.5
Dinv38179 Davidia involucrata HOM05D004525 ORTHO05D005295 3.9e-73 278.5 176 84.7
Sabra03G0106900 Salix brachista HOM05D004525 ORTHO05D005295 3.9e-73 278.5 190 79.5
Prupe.5G130000 Prunus persica HOM05D004525 ORTHO05D005295 4.3e-72 275.0 190 76.8
FAN22G0758 Fragaria x ananassa HOM05D004525 ORTHO05D005295 5.6e-72 274.6 191 77.0
AL1G39060 Arabidopsis lyrata HOM05D004525 ORTHO05D005295 1.3e-71 273.5 192 77.1
CSS0029651 Camellia sinensis var. sinensis HOM05D004525 ORTHO05D005295 6.2e-71 271.2 193 75.1
CSS0036474 Camellia sinensis var. sinensis HOM05D004525 ORTHO05D005295 1.1e-70 270.4 193 75.1
Thhalv10008848m.g Eutrema salsugineum HOM05D004525 ORTHO05D005295 1.1e-70 270.4 194 76.8
AT1G26665 Arabidopsis thaliana HOM05D004525 ORTHO05D005295 1.4e-70 270.0 192 74.5
SGA_v2.0_scaffold14G07039 Striga asiatica HOM05D004525 ORTHO05D005295 2.4e-70 269.2 199 70.9
SGA_v2.0_scaffold36G14274 Striga asiatica HOM05D004525 ORTHO05D005295 2.4e-70 269.2 199 70.9
Actinidia22207 Actinidia chinensis HOM05D004525 ORTHO05D005295 3.1e-70 268.9 195 74.4
CSS0049671 Camellia sinensis var. sinensis HOM05D004525 ORTHO05D005295 3.1e-70 268.9 193 74.6
Aa31LG9G260 Aethionema arabicum HOM05D004525 ORTHO05D005295 6.9e-70 267.7 210 70.5
BcaC06g35131 Brassica carinata HOM05D004525 ORTHO05D005295 6.9e-70 267.7 193 76.7
A07p13030 Brassica napus HOM05D001252 ORTHO05D005295 6.9e-70 267.7 187 77.5
TWI36G0523 Tripterygium wilfordii HOM05D004525 ORTHO05D005295 1.5e-69 266.5 175 80.0
C07p19480 Brassica napus HOM05D001252 ORTHO05D005295 2.0e-69 266.2 193 76.2
Hma1.2p1_0456F.1_g156630 Hydrangea macrophylla HOM05D004525 ORTHO05D005295 2.0e-69 266.2 155 87.1
ECA246G3328 Erigeron canadensis HOM05D004525 ORTHO05D005295 2.6e-69 265.8 158 85.4
Sp1g22150 Schrenkiella parvula HOM05D004525 ORTHO05D005295 2.6e-69 265.8 196 72.4
MBI04_g25309_MAGBIO Magnolia biondii HOM05D004525 ORTHO05D005295 5.8e-69 264.6 191 74.9
Nn3g18812 Nelumbo nucifera HOM05D004525 ORTHO05D005295 5.8e-69 264.6 190 75.3
TAR629G2664 Trochodendron aralioides HOM05D004525 ORTHO05D005295 5.8e-69 264.6 190 77.4
Nitab4.5_0001367g0040 Nicotiana tabacum HOM05D004525 ORTHO05D005295 7.6e-69 264.2 202 71.3
Eucgr.C04229 Eucalyptus grandis HOM05D004525 ORTHO05D005295 1.7e-68 263.1 190 72.6
Sed0024458 Sechium edule HOM05D004525 ORTHO05D005295 1.7e-68 263.1 192 74.0
VMungo0251G0643 Vigna mungo HOM05D004525 ORTHO05D005295 1.7e-68 263.1 192 74.0
Ca_02991_v3 Cicer arietinum L. HOM05D004525 ORTHO05D005295 2.2e-68 262.7 190 72.6
Cc08_g16770 Coffea canephora HOM05D004525 ORTHO05D005295 2.9e-68 262.3 158 83.5
CsaV3_3G000870 Cucumis sativus L. HOM05D004525 ORTHO05D005295 6.5e-68 261.2 163 82.8
Migut.E00628 Erythranthe guttata HOM05D004525 ORTHO05D005295 6.5e-68 261.2 205 69.8
Glyma.08G296500 Glycine max HOM05D004525 ORTHO05D005295 6.5e-68 261.2 191 72.3
EL10Ac5g12425 Beta vulgaris HOM05D004525 ORTHO05D005295 8.4e-68 260.8 201 72.6
BcaB03g14082 Brassica carinata HOM05D004525 ORTHO05D005295 8.4e-68 260.8 195 75.4
Ca_17957_v3 Cicer arietinum L. HOM05D004525 ORTHO05D005295 1.1e-67 260.4 190 71.6
Nitab4.5_0012632g0010 Nicotiana tabacum HOM05D004525 ORTHO05D005295 1.4e-67 260.0 202 70.8
Phvul.003G069600 Phaseolus vulgaris HOM05D004525 ORTHO05D005295 1.4e-67 260.0 191 72.3
SalBow6G4763 Salvia bowleyana HOM05D004525 ORTHO05D005295 2.5e-67 259.2 167 79.0
BraA07t29074Z Brassica rapa HOM05D001252 ORTHO05D005295 5.5e-67 258.1 187 75.9
Haze_09177 Corylus avellana HOM05D004525 ORTHO05D005295 1.2e-66 256.9 174 79.3
MSTRG.24865 Avicennia marina HOM05D004525 ORTHO05D005295 1.6e-66 256.5 202 69.3
Solyc08g065160.3 Solanum lycopersicum HOM05D004525 ORTHO05D005295 2.7e-66 255.8 203 69.0
Sopen08g018760 Solanum pennellii HOM05D004525 ORTHO05D005295 2.7e-66 255.8 203 69.0
PGSC0003DMG400029951 Solanum tuberosum HOM05D004525 ORTHO05D005295 2.7e-66 255.8 203 69.0
ClCG10G000810 Citrullus lanatus HOM05D004525 ORTHO05D005295 3.5e-66 255.4 190 74.7
CARHR212640 Cardamine hirsuta HOM05D004525 ORTHO05D005295 3.9e-65 251.9 192 70.3
Rhsim07G0078000 Rhododendron simsii HOM05D004525 ORTHO05D005295 3.9e-65 251.9 197 72.6
CARHR025300 Cardamine hirsuta HOM05D004525 ORTHO05D005295 6.7e-65 251.1 194 72.2
PSO017G1681 Papaver somniferum HOM05D004525 ORTHO05D005295 8.7e-65 250.8 192 69.8
Sc01g0010720 Simmondsia chinensis HOM05D004525 ORTHO05D005295 1.1e-64 250.4 201 68.7
Glyma.18G125700 Glycine max HOM05D004525 ORTHO05D005295 1.9e-64 249.6 191 70.2
unitig_744.g24303 Utricularia gibba HOM05D004525 ORTHO05D005295 1.9e-64 249.6 197 69.0
Lalb_Chr13g0294931 Lupinus albus HOM05D004525 ORTHO05D005295 3.3e-64 248.8 190 68.4
DCAR_006547 Daucus carota HOM05D004525 ORTHO05D005295 4.3e-64 248.4 162 77.2
MSTRG.12201 Avicennia marina HOM05D004525 ORTHO05D005295 5.7e-64 248.1 199 68.8
Lalb_Chr12g0205381 Lupinus albus HOM05D004525 ORTHO05D005295 5.7e-64 248.1 190 67.9
PSO478G2085 Papaver somniferum HOM05D004525 ORTHO05D005295 5.7e-64 248.1 192 69.3
vmacro11499 Vaccinium macrocarpon HOM05D004525 ORTHO05D005295 5.7e-64 248.1 171 76.6
Aqoxy5G04330 Aquilegia oxysepala HOM05D004525 ORTHO05D005295 9.7e-64 247.3 190 71.1
DCAR_011870 Daucus carota HOM05D004525 ORTHO05D005295 1.3e-63 246.9 192 69.3
CANSAT56G2042 Cannabis sativa HOM05D004525 ORTHO05D005295 1.6e-63 246.5 210 68.1
Aqoxy3G00526 Aquilegia oxysepala HOM05D004525 ORTHO05D005295 2.2e-63 246.1 190 70.5
Lj8A200T57 Lonicera japonica HOM05D004525 ORTHO05D005295 2.2e-63 246.1 153 82.4
Hund11348 Selenicereus undatus HOM05D004525 ORTHO05D005295 2.8e-63 245.7 157 79.0
Zm00001eb103320 Zea mays HOM05D004525 ORTHO05D005295 2.8e-63 245.7 156 81.4
HPP92_025871 Vanilla planifolia HOM05D004525 ORTHO05D005295 3.7e-63 245.4 191 69.6
Carub.0001s2436 Capsella rubella HOM05D004525 ORTHO05D005295 8.2e-63 244.2 194 67.5
Medtr8g085570 Medicago truncatula HOM05D004525 ORTHO05D005295 1.1e-62 243.8 190 66.3
AUR62007057 Chenopodium quinoa HOM05D004525 ORTHO05D005295 2.4e-62 242.7 179 72.1
Psat7g073160 Pisum sativum HOM05D004525 ORTHO05D005295 3.1e-62 242.3 190 67.4
TPR.G15828 Trifolium pratense HOM05D004525 ORTHO05D005295 6.9e-62 241.1 190 67.9
Zm00001eb319380 Zea mays HOM05D004525 ORTHO05D005295 3.4e-61 238.8 177 74.0
AL7G47302 Arabidopsis lyrata HOM05D004525 ORTHO05D005295 4.5e-61 238.4 193 69.9
FAN17G2704 Fragaria x ananassa HOM05D004525 ORTHO05D005295 4.5e-61 238.4 194 70.6
Ah.12g053230 Amaranthus hybridus HOM05D004525 ORTHO05D005295 5.9e-61 238.0 161 74.5
AT5G41910 Arabidopsis thaliana HOM05D004525 ORTHO05D005295 1.3e-60 236.9 193 69.9
Atru.chr3.1913 Acer truncatum HOM05D004525 ORTHO05D005295 1.7e-60 236.5 170 75.9
Os09g0528300 Oryza sativa ssp. japonica HOM05D004525 ORTHO05D005295 1.7e-60 236.5 158 78.5
BolC7t42467H Brassica oleracea HOM05D001252 ORTHO05D001661 1.1e-59 233.8 171 76.0
ATR0620G086 Amborella trichopoda HOM05D004525 ORTHO05D005295 1.4e-59 233.4 170 69.4
unitig_21.g20890 Utricularia gibba HOM05D004525 ORTHO05D005295 7.2e-59 231.1 198 66.2
vmacro13851 Vaccinium macrocarpon HOM05D004525 ORTHO05D005295 9.4e-59 230.7 194 66.0
Lj4g0018067 Lotus japonicus HOM05D004525 ORTHO05D005295 4.6e-58 228.4 193 64.8
Psat7g073280 Pisum sativum HOM05D004525 ORTHO05D005295 1.8e-57 226.5 168 70.2
TPR.G11962 Trifolium pratense HOM05D004525 ORTHO05D005295 1.1e-56 223.8 190 64.7
CDE07G1557 Ceratophyllum demersum HOM05D004525 ORTHO05D005295 2.5e-56 222.6 172 67.4
Lj4g0019040 Lotus japonicus HOM05D004525 ORTHO05D005295 2.8e-55 219.2 169 69.8
Oeu022035.1 Olea europaea HOM05D004525 ORTHO05D005295 2.8e-55 219.2 259 53.3
BraA09t39504Z Brassica rapa HOM05D004525 ORTHO05D005295 3.7e-55 218.8 189 64.6
Peaxi162Scf01444g00013 Petunia axillaris HOM05D004525 ORTHO05D005295 1.0e-52 210.7 180 66.7
arahy.Tifrunner.gnm1.ann1.0LH6ZS Arachis hypogaea HOM05D004525 ORTHO05D005295 2.5e-51 206.1 191 61.3
FAN08G2166 Fragaria x ananassa HOM05D000319 ORTHO05D035382 3.2e-51 205.7 150 72.0
arahy.Tifrunner.gnm1.ann1.DJD4V2 Arachis hypogaea HOM05D004525 ORTHO05D005295 7.2e-51 204.5 191 60.7
Cfa007058 Carpinus fangiana HOM05D004525 ORTHO05D005295 1.5e-48 196.8 139 78.4
C05p24330 Brassica napus HOM05D004525 ORTHO05D005295 1.7e-47 193.4 150 71.3
Psat7g074000 Pisum sativum HOM05D004525 ORTHO05D005295 8.2e-47 191.0 179 62.0
Psat7g072880 Pisum sativum HOM05D004525 ORTHO05D005295 1.5e-45 186.8 147 65.3
MELO3C013773.2 Cucumis melo HOM05D004525 ORTHO05D005295 4.5e-45 185.3 207 54.6
FvH4_5g19692 Fragaria vesca HOM05D004525 ORTHO05D005295 2.9e-44 182.6 165 63.0
Peaxi162Scf00640g00032 Petunia axillaris HOM05D004525 ORTHO05D005295 1.4e-43 180.3 131 69.5
AUR62019920 Chenopodium quinoa HOM05D004525 ORTHO05D005295 2.5e-43 179.5 111 78.4
Actinidia27285 Actinidia chinensis HOM05D004525 ORTHO05D005295 5.2e-41 171.8 192 55.7
TAR375G0036 Trochodendron aralioides HOM05D004525 ORTHO05D005295 8.8e-41 171.0 104 79.8
Nitab4.5_0017193g0030 Nicotiana tabacum HOM05D004525 ORTHO05D005295 1.3e-39 167.2 190 55.3
Mapoly0151s0039 Marchantia polymorpha HOM05D004525 ORTHO05D005295 1.7e-39 166.8 156 53.8
Pp3c11_16910 Physcomitrium patens HOM05D004525 ORTHO05D005295 6.5e-36 154.8 144 52.1
PGSC0003DMG400039131 Solanum tuberosum HOM05D004525 ORTHO05D005295 1.9e-35 153.3 129 61.2
PGSC0003DMG400040735 Solanum tuberosum HOM05D004525 ORTHO05D005295 7.2e-35 151.4 132 63.6
PGSC0003DMG400043501 Solanum tuberosum HOM05D004525 ORTHO05D005295 1.2e-34 150.6 130 63.1
PGSC0003DMG400008601 Solanum tuberosum HOM05D004525 ORTHO05D005295 2.7e-34 149.4 130 63.1
BcaC05g26400 Brassica carinata HOM05D004525 ORTHO05D005295 2.3e-33 146.4 93 76.3
PGSC0003DMG400017120 Solanum tuberosum HOM05D004525 ORTHO05D005295 2.3e-33 146.4 130 63.8
SMO301G0053 Selaginella moellendorffii HOM05D004525 ORTHO05D005295 8.8e-33 144.4 154 50.0
AagrBONN_evm.TU.Sc2ySwM_117.1849 Anthoceros agrestis HOM05D004525 ORTHO05D005295 2.6e-32 142.9 144 48.6
A09p40080 Brassica napus HOM05D004525 ORTHO05D005295 5.7e-32 141.7 121 62.8
CAN.G6.3 Capsicum annuum HOM05D004525 ORTHO05D005295 5.7e-32 141.7 82 82.9
AagrBONN_evm.TU.Sc2ySwM_368.381 Anthoceros agrestis HOM05D004525 ORTHO05D005295 1.3e-31 140.6 172 43.0
SEGI_32557 Sequoiadendron giganteum HOM05D004525 ORTHO05D005295 4.8e-31 138.7 170 47.6
Nitab4.5_0002724g0080 Nicotiana tabacum HOM05D004525 ORTHO05D005295 5.7e-24 115.2 125 56.8
RcHm_v2.0_Chr7g0187021 Rosa chinensis HOM05D004525 ORTHO05D005295 9.8e-24 114.4 183 44.8
CAN.G1631.10 Capsicum annuum HOM05D004525 ORTHO05D005295 9.5e-19 97.8 86 65.1
RcHm_v2.0_Chr5g0055281 Rosa chinensis HOM05D004525 ORTHO05D005295 2.2e-15 86.7 59 69.5
SGA_v2.0_scaffold104G30259 Striga asiatica HOM05D004525 ORTHO05D005295 1.3e-12 77.4 180 38.9
BcaB05g21931 Brassica carinata HOM05D004525 ORTHO05D005295 2.3e-12 76.6 80 65.0
TAR374G0495 Trochodendron aralioides HOM05D004525 ORTHO05D005295 4.0e-09 65.9 103 46.6
Cre12.g556450 Chlamydomonas reinhardtii HOM05D004525 ORTHO05D005295 1.4e-06 57.4 159 27.7


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