Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc27.158 Carica papaya HOM05D005121 ORTHO05D006115 1.2e-82 309.7 150 100.0
GSVIVG01003678001 Vitis vinifera HOM05D005121 ORTHO05D006115 1.8e-73 279.3 143 93.0
Cc06_g18220 Coffea canephora HOM05D005121 ORTHO05D006115 2.6e-72 275.4 143 91.6
Gohir.D10G019900 Gossypium hirsutum HOM05D005121 ORTHO05D006115 5.8e-72 274.2 143 91.6
ClCG09G021600 Citrullus lanatus HOM05D005121 ORTHO05D006115 2.9e-71 271.9 143 90.9
Sed0024430 Sechium edule HOM05D005121 ORTHO05D006115 6.4e-71 270.8 143 90.2
Potri.011G040000 Populus trichocarpa HOM05D005121 ORTHO05D006115 1.1e-70 270.0 143 90.9
CAN.G424.38 Capsicum annuum HOM05D005121 ORTHO05D006115 1.9e-70 269.2 143 88.8
CsaV3_6G007300 Cucumis sativus L. HOM05D005121 ORTHO05D006115 3.2e-70 268.5 143 90.2
Nitab4.5_0000649g0190 Nicotiana tabacum HOM05D005121 ORTHO05D006115 3.2e-70 268.5 143 88.8
MELO3C022396.2 Cucumis melo HOM05D005121 ORTHO05D006115 4.1e-70 268.1 143 89.5
Potri.004G026800 Populus trichocarpa HOM05D005121 ORTHO05D006115 4.1e-70 268.1 143 90.2
MELO3C013201.2 Cucumis melo HOM05D005121 ORTHO05D006115 5.4e-70 267.7 143 89.5
Thecc.06G202500 Theobroma cacao HOM05D005121 ORTHO05D006115 5.4e-70 267.7 143 89.5
ClCG06G001360 Citrullus lanatus HOM05D005121 ORTHO05D006115 7.0e-70 267.3 143 89.5
Actinidia24048 Actinidia chinensis HOM05D005121 ORTHO05D006115 9.2e-70 266.9 143 88.8
CiPaw.10G115700 Carya illinoinensis HOM05D005121 ORTHO05D006115 1.2e-69 266.5 143 88.8
Sabra11G0027500 Salix brachista HOM05D005121 ORTHO05D006115 1.6e-69 266.2 143 89.5
TWI63G0506 Tripterygium wilfordii HOM05D005121 ORTHO05D006115 1.6e-69 266.2 143 88.8
CsaV3_7G021490 Cucumis sativus L. HOM05D005121 ORTHO05D006115 2.7e-69 265.4 143 88.8
CANSAT56G0975 Cannabis sativa HOM05D005121 ORTHO05D006115 1.0e-68 263.5 143 88.8
MD05G1329000 Malus domestica HOM05D005121 ORTHO05D006115 1.0e-68 263.5 143 86.0
Peaxi162Scf01152g00110 Petunia axillaris HOM05D005121 ORTHO05D006115 1.3e-68 263.1 143 87.4
HanXRQChr12g0359441 Helianthus annuus HOM05D005121 ORTHO05D006115 3.9e-68 261.5 143 87.4
Lsat_1_v5_gn_5_78441 Lactuca sativa HOM05D005121 ORTHO05D006115 5.0e-68 261.2 143 87.4
DCAR_004161 Daucus carota HOM05D005121 ORTHO05D006115 8.6e-68 260.4 144 86.1
PSO210G2069 Papaver somniferum HOM05D005121 ORTHO05D006115 1.1e-67 260.0 143 86.7
ECA234G4718 Erigeron canadensis HOM05D005121 ORTHO05D006115 1.5e-67 259.6 143 86.7
Lj6g0004146 Lotus japonicus HOM05D005121 ORTHO05D006115 1.9e-67 259.2 143 84.6
MD10G1305900 Malus domestica HOM05D005121 ORTHO05D006115 2.5e-67 258.8 143 84.6
Ciclev10016069m.g Citrus clementina HOM05D005121 ORTHO05D006115 3.3e-67 258.5 143 86.0
Eucgr.D00772 Eucalyptus grandis HOM05D005121 ORTHO05D006115 3.3e-67 258.5 143 86.0
TPR.G19604 Trifolium pratense HOM05D005121 ORTHO05D006115 3.3e-67 258.5 143 86.7
Duzib235G0052 Durio zibethinus HOM05D005121 ORTHO05D006115 7.3e-67 257.3 143 86.7
Nitab4.5_0005620g0020 Nicotiana tabacum HOM05D005121 ORTHO05D006115 9.5e-67 256.9 143 86.0
RcHm_v2.0_Chr5g0005701 Rosa chinensis HOM05D005121 ORTHO05D006115 9.5e-67 256.9 143 84.6
CDE02G1411 Ceratophyllum demersum HOM05D005121 ORTHO05D006115 2.8e-66 255.4 143 85.3
CDE05G3522 Ceratophyllum demersum HOM05D005121 ORTHO05D006115 2.8e-66 255.4 143 86.0
Duzib160G0488 Durio zibethinus HOM05D005121 ORTHO05D006115 2.8e-66 255.4 143 85.3
Lj1A1216T23 Lonicera japonica HOM05D005121 ORTHO05D006115 2.8e-66 255.4 145 84.8
Nn1g06832 Nelumbo nucifera HOM05D005121 ORTHO05D006115 2.8e-66 255.4 143 86.0
Rhsim02G0118100 Rhododendron simsii HOM05D005121 ORTHO05D006115 2.8e-66 255.4 143 85.3
CSS0003935 Camellia sinensis var. sinensis HOM05D005121 ORTHO05D006115 3.6e-66 255.0 143 85.3
CSS0043949 Camellia sinensis var. sinensis HOM05D005121 ORTHO05D006115 3.6e-66 255.0 143 85.3
AUR62012514 Chenopodium quinoa HOM05D005121 ORTHO05D006115 3.6e-66 255.0 143 85.3
AUR62014685 Chenopodium quinoa HOM05D005121 ORTHO05D006115 3.6e-66 255.0 143 85.3
Gorai.011G021100 Gossypium raimondii HOM05D005121 ORTHO05D006115 3.6e-66 255.0 143 86.0
Aa31LG2G9240 Aethionema arabicum HOM05D005121 ORTHO05D006115 4.7e-66 254.6 143 83.9
Os03g0279900 Oryza sativa ssp. japonica HOM05D005121 ORTHO05D006115 4.7e-66 254.6 143 85.3
Dinv18977 Davidia involucrata HOM05D005121 ORTHO05D006115 6.2e-66 254.2 143 85.3
EL10Ac6g14131 Beta vulgaris HOM05D005121 ORTHO05D006115 8.1e-66 253.8 143 85.3
Thhalv10023604m.g Eutrema salsugineum HOM05D005121 ORTHO05D006115 8.1e-66 253.8 143 81.8
PGSC0003DMG400022347 Solanum tuberosum HOM05D005121 ORTHO05D006115 1.1e-65 253.4 143 85.3
Atru.chr10.2037 Acer truncatum HOM05D005121 ORTHO05D006115 1.4e-65 253.1 143 85.3
Aqoxy7G03433 Aquilegia oxysepala HOM05D005121 ORTHO05D006115 1.4e-65 253.1 143 84.6
arahy.Tifrunner.gnm1.ann1.ANU5MI Arachis hypogaea HOM05D005121 ORTHO05D006115 1.4e-65 253.1 143 86.0
arahy.Tifrunner.gnm1.ann1.XU4W4S Arachis hypogaea HOM05D005121 ORTHO05D006115 1.4e-65 253.1 143 86.0
THA.LOC104809541 Tarenaya hassleriana HOM05D005121 ORTHO05D006115 1.4e-65 253.1 143 86.0
CARHR050750 Cardamine hirsuta HOM05D005121 ORTHO05D006115 1.8e-65 252.7 143 81.8
Gohir.A10G019000 Gossypium hirsutum HOM05D005121 ORTHO05D006115 1.8e-65 252.7 143 85.3
Solyc02g079400.3 Solanum lycopersicum HOM05D005121 ORTHO05D006115 2.3e-65 252.3 143 84.6
Sopen02g024200 Solanum pennellii HOM05D005121 ORTHO05D006115 2.3e-65 252.3 143 84.6
FvH4_3g03660 Fragaria vesca HOM05D005121 ORTHO05D006115 3.1e-65 251.9 143 82.5
FAN21G3866 Fragaria x ananassa HOM05D005121 ORTHO05D006115 3.1e-65 251.9 143 82.5
FAN25G2418 Fragaria x ananassa HOM05D005121 ORTHO05D006115 3.1e-65 251.9 143 82.5
QL05p080508 Quercus lobata HOM05D005121 ORTHO05D006115 3.1e-65 251.9 143 85.3
arahy.Tifrunner.gnm1.ann1.FY8LHX Arachis hypogaea HOM05D005121 ORTHO05D006115 4.0e-65 251.5 143 85.3
BcaB04g20348 Brassica carinata HOM05D005121 ORTHO05D006115 4.0e-65 251.5 143 81.1
BcaC06g31855 Brassica carinata HOM05D005121 ORTHO05D006115 4.0e-65 251.5 143 81.8
A01p30380 Brassica napus HOM05D005121 ORTHO05D006115 4.0e-65 251.5 143 81.1
C01p38590 Brassica napus HOM05D005121 ORTHO05D006115 4.0e-65 251.5 143 81.1
BraA01t03171Z Brassica rapa HOM05D005121 ORTHO05D006115 4.0e-65 251.5 143 81.1
Sp2g02960 Schrenkiella parvula HOM05D005121 ORTHO05D006115 4.0e-65 251.5 143 81.1
PGR031G1397 Punica granatum HOM05D005121 ORTHO05D006115 5.2e-65 251.1 143 84.6
COL.COLO4_31636 Corchorus olitorius HOM05D005121 ORTHO05D006115 8.9e-65 250.4 143 84.6
DCAR_008096 Daucus carota HOM05D005121 ORTHO05D006115 8.9e-65 250.4 143 82.5
unitig_26.g9381 Utricularia gibba HOM05D005121 ORTHO05D006115 8.9e-65 250.4 143 83.9
AL2G14620 Arabidopsis lyrata HOM05D005121 ORTHO05D006115 1.2e-64 250.0 143 81.1
Oeu027963.1 Olea europaea HOM05D005121 ORTHO05D006115 1.5e-64 249.6 143 85.3
Manes.17G032800 Manihot esculenta HOM05D005121 ORTHO05D006115 2.6e-64 248.8 143 84.6
SGA_v2.0_scaffold114G31993 Striga asiatica HOM05D005121 ORTHO05D006115 2.6e-64 248.8 144 84.7
TWI38G0490 Tripterygium wilfordii HOM05D005121 ORTHO05D006115 3.4e-64 248.4 143 84.6
HanXRQChr10g0310231 Helianthus annuus HOM05D005121 ORTHO05D006115 4.4e-64 248.1 143 84.6
ATR1132G047 Amborella trichopoda HOM05D005121 ORTHO05D006115 5.8e-64 247.7 143 83.2
TAR627G0857 Trochodendron aralioides HOM05D005121 ORTHO05D006115 7.5e-64 247.3 143 83.2
Cfa000313 Carpinus fangiana HOM05D005121 ORTHO05D006115 9.9e-64 246.9 143 83.2
Ca_00225_v3 Cicer arietinum L. HOM05D005121 ORTHO05D006115 9.9e-64 246.9 143 83.2
FAN16G2329 Fragaria x ananassa HOM05D005121 ORTHO05D006115 3.7e-63 245.0 140 82.1
Sc24g0000680 Simmondsia chinensis HOM05D005121 ORTHO05D006115 3.7e-63 245.0 143 82.5
Glyma.13G247800 Glycine max HOM05D005121 ORTHO05D006115 4.9e-63 244.6 143 83.2
Psat1g209560 Pisum sativum HOM05D005121 ORTHO05D006115 6.4e-63 244.2 143 83.2
VMungo0540G0293 Vigna mungo HOM05D005121 ORTHO05D006115 6.4e-63 244.2 143 82.5
AT1G61620 Arabidopsis thaliana HOM05D005121 ORTHO05D006115 8.3e-63 243.8 143 79.7
Medtr2g011480 Medicago truncatula HOM05D005121 ORTHO05D006115 1.1e-62 243.4 143 83.2
MSTRG.7276 Avicennia marina HOM05D005121 ORTHO05D006115 1.4e-62 243.0 143 81.1
Carub.0002s0357 Capsella rubella HOM05D005121 ORTHO05D006115 1.4e-62 243.0 143 79.7
Phvul.006G193700 Phaseolus vulgaris HOM05D005121 ORTHO05D006115 1.4e-62 243.0 143 81.8
CARHR011610 Cardamine hirsuta HOM05D005121 ORTHO05D006115 1.9e-62 242.7 143 81.8
Prupe.4G033800 Prunus persica HOM05D005121 ORTHO05D006115 1.9e-62 242.7 143 81.8
Manes.16G019177 Manihot esculenta HOM05D005121 ORTHO05D006115 5.4e-62 241.1 143 81.1
Zm00001eb012710 Zea mays HOM05D005121 ORTHO05D006115 1.2e-61 240.0 143 81.1
Glyma.15G066000 Glycine max HOM05D005121 ORTHO05D006115 2.7e-61 238.8 143 81.1
Lalb_Chr18g0060031 Lupinus albus HOM05D005121 ORTHO05D006115 2.7e-61 238.8 143 79.7
FAN11G1262 Fragaria x ananassa HOM05D005121 ORTHO05D006115 4.6e-61 238.0 168 70.2
Zm00001eb397470 Zea mays HOM05D005121 ORTHO05D006115 6.0e-61 237.7 143 79.7
Oeu030047.2 Olea europaea HOM05D005121 ORTHO05D006115 2.3e-60 235.7 164 73.2
Hund21294 Selenicereus undatus HOM05D005121 ORTHO05D006115 2.3e-60 235.7 143 79.7
Zm00001eb397440 Zea mays HOM05D005121 ORTHO05D006115 3.0e-60 235.3 143 79.7
Migut.M01229 Erythranthe guttata HOM05D005121 ORTHO05D006115 8.6e-60 233.8 143 80.4
Sabra04G0015300 Salix brachista HOM05D005121 ORTHO05D006115 1.5e-59 233.0 210 60.0
Zm00001eb397450 Zea mays HOM05D005121 ORTHO05D006115 1.9e-59 232.6 143 78.3
Zm00001eb397460 Zea mays HOM05D005121 ORTHO05D006115 1.9e-59 232.6 143 78.3
Zm00001eb397480 Zea mays HOM05D005121 ORTHO05D006115 1.9e-59 232.6 143 78.3
Mapoly0029s0083 Marchantia polymorpha HOM05D005121 ORTHO05D006115 6.8e-57 224.2 145 74.5
Pp3c9_6940 Physcomitrium patens HOM05D005121 ORTHO05D006115 3.5e-53 211.8 143 69.9
Haze_06613 Corylus avellana HOM05D005121 ORTHO05D006115 6.6e-52 207.6 231 51.1
Pp3c15_12040 Physcomitrium patens HOM05D005121 ORTHO05D006115 6.6e-52 207.6 143 69.2
SMO147G0402 Selaginella moellendorffii HOM05D005121 ORTHO05D006115 4.3e-51 204.9 145 71.0
Migut.H01530 Erythranthe guttata HOM05D005121 ORTHO05D006115 1.2e-50 203.4 120 79.2
CBR_g4035 Chara braunii HOM05D005121 ORTHO05D006115 2.2e-47 192.6 148 66.2
AagrBONN_evm.TU.Sc2ySwM_344.3296 Anthoceros agrestis HOM05D005121 ORTHO05D006115 2.8e-42 175.6 143 60.8
Peaxi162Scf00047g00079 Petunia axillaris HOM05D005121 ORTHO05D006115 1.2e-40 170.2 83 91.6
ATR1132G008 Amborella trichopoda HOM05D005121 ORTHO05D006115 5.8e-40 167.9 89 86.5
Ah.09g236480 Amaranthus hybridus HOM05D005121 ORTHO05D006115 6.4e-39 164.5 79 93.7
vmacro15853 Vaccinium macrocarpon HOM05D005121 ORTHO05D006115 2.4e-38 162.5 98 80.6
BolC1t03821H Brassica oleracea HOM05D005121 ORTHO05D006115 5.4e-38 161.4 80 88.8
unitig_749.g13632 Utricularia gibba HOM05D005121 ORTHO05D006115 5.6e-35 151.4 143 61.5
Sed0008986 Sechium edule HOM05D005121 ORTHO05D006115 3.8e-31 138.7 150 55.3
TAR628G0944 Trochodendron aralioides HOM05D004330 ORTHO05D005182 3.2e-30 135.6 102 68.6
Actinidia11821 Actinidia chinensis HOM05D005121 ORTHO05D006115 6.0e-29 131.3 99 70.7
Hma1.2p1_0155F.1_g068340 Hydrangea macrophylla HOM05D005121 ORTHO05D006115 5.6e-27 124.8 82 70.7
Lj6g0012970 Lotus japonicus HOM05D003951 ORTHO05D006115 5.8e-24 114.8 58 87.9
SGA_v2.0_scaffold7G03907 Striga asiatica HOM05D005121 ORTHO05D006115 9.3e-22 107.5 64 78.1
Peaxi162Scf00047g00710 Petunia axillaris HOM05D001486 ORTHO05D004921 4.6e-21 105.1 64 81.2
vmacro15854 Vaccinium macrocarpon HOM05D005121 ORTHO05D006115 1.8e-17 93.2 63 74.6
Cre02.g142086 Chlamydomonas reinhardtii HOM05D005121 ORTHO05D006115 9.0e-17 90.9 116 46.6
MCO09G390 Micromonas commoda HOM05D005121 ORTHO05D006115 4.5e-16 88.6 122 41.0
TAR626G1242 Trochodendron aralioides HOM05D005121 ORTHO05D006115 4.5e-16 88.6 73 65.8
Ah.09g236300 Amaranthus hybridus HOM05D005121 ORTHO05D006115 3.9e-12 75.5 66 62.1
HPP92_010075 Vanilla planifolia HOM05D005121 ORTHO05D006115 1.9e-11 73.2 46 69.6
PRCOL_00001084 Prasinoderma coloniale HOM05D005121 ORTHO05D006115 2.5e-11 72.8 88 44.3
Cfa022197 Carpinus fangiana HOM05D005121 ORTHO05D006115 4.8e-10 68.6 140 32.9
Ah.14g088780 Amaranthus hybridus HOM05D005121 ORTHO05D006115 1.4e-09 67.0 42 69.0


User provided reference genes

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