Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc27.103 Carica papaya HOM05D007756 ORTHO05D009403 1.8e-19 98.6 64 100.0
Thecc.06G196200 Theobroma cacao HOM05D007756 ORTHO05D009403 1.5e-08 62.4 44 72.7
Gohir.A10G019600 Gossypium hirsutum HOM05D007756 ORTHO05D009403 9.5e-08 59.7 44 68.2
Gohir.D10G020250 Gossypium hirsutum HOM05D007756 ORTHO05D009403 9.5e-08 59.7 44 68.2
Ciclev10017421m.g Citrus clementina HOM05D007756 ORTHO05D009403 1.2e-07 59.3 48 66.7
Gohir.D10G020400 Gossypium hirsutum HOM05D007756 ORTHO05D009403 1.2e-07 59.3 44 68.2
RcHm_v2.0_Chr5g0006791 Rosa chinensis HOM05D007756 ORTHO05D009403 1.2e-07 59.3 40 67.5
Gohir.D05G167100 Gossypium hirsutum HOM05D007756 ORTHO05D009403 1.6e-07 58.9 44 65.9
Gohir.A05G164200 Gossypium hirsutum HOM05D007756 ORTHO05D009403 2.1e-07 58.5 44 65.9
Gohir.A10G019400 Gossypium hirsutum HOM05D007756 ORTHO05D009403 2.1e-07 58.5 44 65.9
Gorai.009G172100 Gossypium raimondii HOM05D007756 ORTHO05D009403 2.1e-07 58.5 44 65.9
Hma1.2p1_0144F.1_g064960 Hydrangea macrophylla HOM05D007756 ORTHO05D009403 2.8e-07 58.2 44 70.5
Hma1.2p1_0144F.1_g064980 Hydrangea macrophylla HOM05D007756 ORTHO05D009403 3.6e-07 57.8 43 74.4
Manes.16G038800 Manihot esculenta HOM05D007756 ORTHO05D009403 6.2e-07 57.0 44 72.7
CiPaw.09G159600 Carya illinoinensis HOM05D007756 ORTHO05D009403 1.4e-06 55.8 44 68.2
RcHm_v2.0_Chr5g0006811 Rosa chinensis HOM05D007756 ORTHO05D009403 1.8e-06 55.5 40 62.5
Cfa000371 Carpinus fangiana HOM05D007756 ORTHO05D009403 2.3e-06 55.1 44 63.6
CiPaw.09G159700 Carya illinoinensis HOM05D007756 ORTHO05D009403 2.3e-06 55.1 44 65.9
Gohir.A06G123802 Gossypium hirsutum HOM05D007756 ORTHO05D009403 2.3e-06 55.1 44 63.6
Manes.17G040600 Manihot esculenta HOM05D007756 ORTHO05D009403 2.3e-06 55.1 44 65.9
PGSC0003DMG400022450 Solanum tuberosum HOM05D007756 ORTHO05D009403 2.3e-06 55.1 43 60.5
GSVIVG01005837001 Vitis vinifera HOM05D007756 ORTHO05D009403 2.3e-06 55.1 44 63.6
Gohir.D06G128600 Gossypium hirsutum HOM05D007756 ORTHO05D009403 3.1e-06 54.7 44 63.6
TAR679G0001 Trochodendron aralioides HOM05D007756 ORTHO05D009403 3.1e-06 54.7 43 65.1
ClCG01G022590 Citrullus lanatus HOM05D007756 ORTHO05D009403 4.0e-06 54.3 43 65.1
RcHm_v2.0_Chr5g0006801 Rosa chinensis HOM05D007756 ORTHO05D009403 4.0e-06 54.3 40 60.0
PGSC0003DMG400022449 Solanum tuberosum HOM05D007756 ORTHO05D009403 4.0e-06 54.3 43 60.5
Glyma.07G191400 Glycine max HOM05D007756 ORTHO05D009403 5.2e-06 53.9 41 73.2
BcaB03g13271 Brassica carinata HOM05D015938 ORTHO05D009403 6.8e-06 53.5 45 62.2
BcaB03g13272 Brassica carinata HOM05D015938 ORTHO05D009403 6.8e-06 53.5 45 62.2
CSS0020554 Camellia sinensis var. sinensis HOM05D007756 ORTHO05D009403 6.8e-06 53.5 43 58.1
CSS0041901 Camellia sinensis var. sinensis HOM05D007756 ORTHO05D009403 6.8e-06 53.5 43 58.1
Prupe.4G039100 Prunus persica HOM05D007756 ORTHO05D009403 6.8e-06 53.5 44 63.6
Solyc02g078870.1 Solanum lycopersicum HOM05D007756 ORTHO05D009403 6.8e-06 53.5 43 58.1
PGSC0003DMG400022448 Solanum tuberosum HOM05D007756 ORTHO05D009403 6.8e-06 53.5 40 60.0


User provided reference genes

Program Settings