Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc2655.1 Carica papaya HOM05D005484 ORTHO05D006761 1.4e-78 296.2 153 100.0
Manes.04G011000 Manihot esculenta HOM05D005484 ORTHO05D006761 4.7e-29 131.7 143 57.3
Manes.11G155200 Manihot esculenta HOM05D005484 ORTHO05D006761 4.0e-28 128.6 142 57.0
Duzib170G0418 Durio zibethinus HOM05D005484 ORTHO05D006761 7.5e-27 124.4 148 56.1
Thecc.09G294600 Theobroma cacao HOM05D005484 ORTHO05D006761 5.4e-25 118.2 152 55.3
COL.COLO4_19256 Corchorus olitorius HOM05D005484 ORTHO05D006761 4.6e-24 115.2 153 53.6
CSS0041747 Camellia sinensis var. sinensis HOM05D005484 ORTHO05D006761 2.3e-23 112.8 147 50.3
Atru.chr3.3424 Acer truncatum HOM05D005484 ORTHO05D006761 5.0e-23 111.7 140 55.7
Rhsim13G0103500 Rhododendron simsii HOM05D005484 ORTHO05D006761 1.5e-22 110.2 155 52.9
vmacro03234 Vaccinium macrocarpon HOM05D005484 ORTHO05D006761 2.1e-21 106.3 167 50.9
Ciclev10028468m.g Citrus clementina HOM05D005484 ORTHO05D006761 8.1e-21 104.4 140 54.3
Potri.009G151400 Populus trichocarpa HOM05D005484 ORTHO05D006761 8.1e-21 104.4 138 54.3
PGR119G0112 Punica granatum HOM05D005484 ORTHO05D006761 1.1e-20 104.0 149 50.3
QL01p014158 Quercus lobata HOM05D005484 ORTHO05D006761 1.4e-20 103.6 157 49.0
Duzib150G1233 Durio zibethinus HOM05D005484 ORTHO05D006761 2.3e-20 102.8 162 51.2
TWI31G0675 Tripterygium wilfordii HOM05D005484 ORTHO05D006761 3.1e-20 102.4 144 51.4
Gohir.A09G086400 Gossypium hirsutum HOM05D005484 ORTHO05D006761 6.8e-20 101.3 149 51.0
Gohir.A13G223600 Gossypium hirsutum HOM05D005484 ORTHO05D006761 6.8e-20 101.3 154 50.0
Actinidia24166 Actinidia chinensis HOM05D005484 ORTHO05D006761 1.5e-19 100.1 165 44.2
Actinidia07200 Actinidia chinensis HOM05D005484 ORTHO05D006761 2.0e-19 99.8 164 45.7
Gohir.D13G228400 Gossypium hirsutum HOM05D005484 ORTHO05D006761 2.0e-19 99.8 154 49.4
Gorai.013G259100 Gossypium raimondii HOM05D005484 ORTHO05D006761 5.8e-19 98.2 154 48.7
Gohir.D09G086420 Gossypium hirsutum HOM05D005484 ORTHO05D006761 9.8e-19 97.4 148 50.7
Gorai.006G102800 Gossypium raimondii HOM05D005484 ORTHO05D006761 9.8e-19 97.4 148 50.7
Eucgr.J00410 Eucalyptus grandis HOM05D005484 ORTHO05D006761 1.3e-18 97.1 149 45.6
CsaV3_1G014320 Cucumis sativus L. HOM05D005484 ORTHO05D006761 1.7e-18 96.7 141 48.2
CsaV3_4G022020 Cucumis sativus L. HOM05D005484 ORTHO05D006761 1.1e-17 94.0 134 50.0
Sabra09G0119900 Salix brachista HOM05D005484 ORTHO05D006761 1.1e-17 94.0 144 48.6
CANSAT64G0117 Cannabis sativa HOM05D005484 ORTHO05D006761 1.4e-17 93.6 140 48.6
Cfa010112 Carpinus fangiana HOM05D005484 ORTHO05D006761 1.4e-17 93.6 156 46.8
ClCG01G013990 Citrullus lanatus HOM05D005484 ORTHO05D006761 2.4e-17 92.8 141 46.8
MELO3C004840.2 Cucumis melo HOM05D005484 ORTHO05D006761 2.4e-17 92.8 152 46.1
Sed0014392 Sechium edule HOM05D005484 ORTHO05D006761 4.1e-17 92.0 149 47.0
CANSAT64G0716 Cannabis sativa HOM05D005484 ORTHO05D006761 1.2e-16 90.5 140 47.9
CiPaw.14G105100 Carya illinoinensis HOM05D005484 ORTHO05D006761 1.2e-16 90.5 155 45.2
CARHR190740 Cardamine hirsuta HOM05D005484 ORTHO05D006761 1.6e-16 90.1 156 47.4
Ca_01692_v3 Cicer arietinum L. HOM05D005484 ORTHO05D006761 7.8e-16 87.8 91 57.1
Ca_30938_v3 Cicer arietinum L. HOM05D005484 ORTHO05D006761 7.8e-16 87.8 91 57.1
Glyma.12G180000 Glycine max HOM05D005484 ORTHO05D006761 1.0e-15 87.4 97 55.7
TAR623G0584 Trochodendron aralioides HOM05D005484 ORTHO05D006761 1.3e-15 87.0 156 41.0
GSVIVG01031426001 Vitis vinifera HOM05D005484 ORTHO05D006761 1.3e-15 87.0 151 46.4
Lj3g0024733 Lotus japonicus HOM05D005484 ORTHO05D006761 1.7e-15 86.7 98 56.1
Carub.0006s2055 Capsella rubella HOM05D005484 ORTHO05D006761 3.0e-15 85.9 154 45.5
AL6G33940 Arabidopsis lyrata HOM05D005484 ORTHO05D006761 5.1e-15 85.1 156 44.9
Glyma.13G320800 Glycine max HOM05D005484 ORTHO05D006761 5.1e-15 85.1 93 58.1
Lj2A998T22 Lonicera japonica HOM05D005484 ORTHO05D006761 6.6e-15 84.7 165 43.0
Medtr2g084565 Medicago truncatula HOM05D005484 ORTHO05D006761 8.6e-15 84.3 89 56.2
Nn2g13932 Nelumbo nucifera HOM05D005484 ORTHO05D006761 1.9e-14 83.2 119 48.7
arahy.Tifrunner.gnm1.ann1.9XN6EE Arachis hypogaea HOM05D005484 ORTHO05D006761 3.3e-14 82.4 97 54.6
Aa31LG1G12880 Aethionema arabicum HOM05D005484 ORTHO05D006761 5.6e-14 81.6 158 42.4
arahy.Tifrunner.gnm1.ann1.TP1LAH Arachis hypogaea HOM05D005484 ORTHO05D006761 7.3e-14 81.3 97 53.6
Psat5g253880 Pisum sativum HOM05D005484 ORTHO05D006761 7.3e-14 81.3 90 56.7
RcHm_v2.0_Chr5g0055951 Rosa chinensis HOM05D005484 ORTHO05D006761 2.1e-13 79.7 92 53.3
Lalb_Chr22g0350511 Lupinus albus HOM05D005484 ORTHO05D006761 4.7e-13 78.6 109 50.5
TPR.G32384 Trifolium pratense HOM05D005484 ORTHO05D006761 6.2e-13 78.2 98 50.0
AT5G22830 Arabidopsis thaliana HOM05D005484 ORTHO05D006761 8.1e-13 77.8 159 42.1
Cc01_g10030 Coffea canephora HOM05D005484 ORTHO05D006761 8.1e-13 77.8 97 50.5
Migut.N02528 Erythranthe guttata HOM05D005484 ORTHO05D006761 8.1e-13 77.8 153 39.9
Hma1.2p1_1447F.1_g284000 Hydrangea macrophylla HOM05D005484 ORTHO05D006761 8.1e-13 77.8 146 44.5
Lsat_1_v5_gn_2_96860 Lactuca sativa HOM05D005484 ORTHO05D006761 1.1e-12 77.4 139 42.4
Aqoxy1G01005 Aquilegia oxysepala HOM05D005484 ORTHO05D006761 3.1e-12 75.9 142 38.7
Sc06g0008870 Simmondsia chinensis HOM05D005484 ORTHO05D006761 3.1e-12 75.9 115 44.3
FAN25G3300 Fragaria x ananassa HOM05D005484 ORTHO05D006761 5.2e-12 75.1 143 42.7
Nitab4.5_0000442g0140 Nicotiana tabacum HOM05D005484 ORTHO05D006761 6.8e-12 74.7 132 42.4
Ah.01g016150 Amaranthus hybridus HOM05D005484 ORTHO05D006761 8.9e-12 74.3 120 45.8
Sp6g22590 Schrenkiella parvula HOM05D005484 ORTHO05D006761 8.9e-12 74.3 160 40.6
FAN16G1757 Fragaria x ananassa HOM05D005484 ORTHO05D006761 1.2e-11 73.9 114 47.4
Phvul.005G128800 Phaseolus vulgaris HOM05D005484 ORTHO05D006761 1.2e-11 73.9 93 54.8
MD11G1153500 Malus domestica HOM05D005484 ORTHO05D006761 1.5e-11 73.6 143 44.1
Prupe.6G116100 Prunus persica HOM05D005484 ORTHO05D006761 2.0e-11 73.2 148 39.2
VMungo1080G0291 Vigna mungo HOM05D005484 ORTHO05D006761 3.4e-11 72.4 93 55.9
MD03G1131000 Malus domestica HOM05D005484 ORTHO05D006761 1.7e-10 70.1 110 47.3
PSO063G3820 Papaver somniferum HOM05D005484 ORTHO05D006761 3.8e-10 68.9 161 39.8
FvH4_3g30160 Fragaria vesca HOM05D005484 ORTHO05D006761 6.4e-10 68.2 139 41.7
FAN11G2949 Fragaria x ananassa HOM05D005484 ORTHO05D006761 6.4e-10 68.2 115 47.0
THA.LOC104799526 Tarenaya hassleriana HOM05D005484 ORTHO05D006761 6.4e-10 68.2 168 38.7
CAN.G644.47 Capsicum annuum HOM05D005484 ORTHO05D006761 8.4e-10 67.8 132 40.2
A10p18190 Brassica napus HOM05D005484 ORTHO05D006761 1.1e-09 67.4 162 38.9
BraA10t43894Z Brassica rapa HOM05D005484 ORTHO05D006761 1.1e-09 67.4 162 38.9
SalBow3G0456 Salvia bowleyana HOM05D005484 ORTHO05D006761 1.1e-09 67.4 89 47.2
DCAR_015491 Daucus carota HOM05D005484 ORTHO05D006761 1.4e-09 67.0 126 45.2
Solyc11g066660.3 Solanum lycopersicum HOM05D005484 ORTHO05D006761 1.9e-09 66.6 96 49.0
PSO339G5122 Papaver somniferum HOM05D005484 ORTHO05D006761 2.4e-09 66.2 166 36.1
unitig_22.g6648 Utricularia gibba HOM05D005484 ORTHO05D006761 2.4e-09 66.2 144 39.6
Thhalv10013483m.g Eutrema salsugineum HOM05D005484 ORTHO05D006761 3.2e-09 65.9 147 39.5
BcaB08g36405 Brassica carinata HOM05D005484 ORTHO05D006761 4.1e-09 65.5 152 38.8
Oeu026994.1 Olea europaea HOM05D005484 ORTHO05D006761 4.1e-09 65.5 154 39.0
C09p53800 Brassica napus HOM05D005484 ORTHO05D006761 5.4e-09 65.1 157 38.2
BolC9t58255H Brassica oleracea HOM05D005484 ORTHO05D006761 5.4e-09 65.1 157 38.2
SGA_v2.0_scaffold466G52019 Striga asiatica HOM05D005484 ORTHO05D006761 5.4e-09 65.1 95 46.3
HanXRQChr14g0451871 Helianthus annuus HOM05D005484 ORTHO05D006761 9.2e-09 64.3 148 37.8
Sopen11g026390 Solanum pennellii HOM05D005484 ORTHO05D006761 9.2e-09 64.3 97 49.5
Lsat_1_v5_gn_6_42460 Lactuca sativa HOM05D005484 ORTHO05D006761 1.2e-08 63.9 135 38.5
Os03g0684400 Oryza sativa ssp. japonica HOM05D005484 ORTHO05D006761 1.6e-08 63.5 65 58.5
Peaxi162Scf00150g00079 Petunia axillaris HOM05D005484 ORTHO05D006761 2.1e-08 63.2 135 37.8
AUR62031772 Chenopodium quinoa HOM05D005484 ORTHO05D006761 6.0e-08 61.6 155 36.1
HanXRQChr02g0055131 Helianthus annuus HOM05D005484 ORTHO05D006761 1.0e-07 60.8 139 35.3
Zm00001eb053210 Zea mays HOM05D005484 ORTHO05D006761 1.3e-07 60.5 65 49.2
ATR0665G031 Amborella trichopoda HOM05D005484 ORTHO05D006761 1.7e-07 60.1 41 70.7
BcaC04g19603 Brassica carinata HOM05D005484 ORTHO05D006761 2.3e-07 59.7 144 39.6
MBI01_g19332_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 3.0e-07 59.3 162 35.8
EL10Ac9g21044 Beta vulgaris HOM05D005484 ORTHO05D006761 3.9e-07 58.9 105 42.9
ECA233G3593 Erigeron canadensis HOM05D005484 ORTHO05D006761 5.1e-07 58.5 105 40.0
Hma1.2p1_0864F.1_g230060 Hydrangea macrophylla HOM05D005484 ORTHO05D006761 6.6e-07 58.2 132 40.9
Haze_23498 Corylus avellana HOM05D005484 ORTHO05D006761 8.6e-07 57.8 133 37.6
SEGI_15590 Sequoiadendron giganteum HOM05D005484 ORTHO05D006761 8.6e-07 57.8 44 63.6
CDE06G0450 Ceratophyllum demersum HOM05D005484 ORTHO05D006761 2.5e-06 56.2 35 71.4
AUR62023974 Chenopodium quinoa HOM05D005484 ORTHO05D006761 3.3e-06 55.8 98 41.8
ECA238G0643 Erigeron canadensis HOM05D005484 ORTHO05D006761 4.3e-06 55.5 130 38.5


User provided reference genes

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