Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc2644.1 Carica papaya HOM05D000002 ORTHO05D001134 1.7e-57 225.7 110 100.0
Cpa.g.sc495.1 Carica papaya HOM05D000002 ORTHO05D001134 1.4e-35 152.9 110 70.9
Cpa.g.sc4.185 Carica papaya HOM05D000002 ORTHO05D001134 2.8e-23 112.1 110 50.9
CSS0044748 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 4.4e-21 104.8 111 45.9
CSS0001359 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 5.8e-21 104.4 111 45.9
CSS0005787 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 5.8e-21 104.4 111 45.9
CSS0045046 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 5.8e-21 104.4 111 45.9
CSS0047428 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 5.8e-21 104.4 111 45.9
CSS0015894 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 7.6e-21 104.0 111 45.9
CSS0017973 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 7.6e-21 104.0 111 45.9
CSS0019952 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 7.6e-21 104.0 111 45.9
CSS0021489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 7.6e-21 104.0 111 45.9
CSS0031421 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 7.6e-21 104.0 111 45.9
CSS0032029 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 7.6e-21 104.0 111 45.9
CSS0040386 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 7.6e-21 104.0 111 45.9
CSS0043616 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 7.6e-21 104.0 111 45.9
CSS0013561 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 9.9e-21 103.6 111 45.9
CSS0004348 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.3e-20 103.2 111 45.9
CSS0048219 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.7e-20 102.8 111 45.0
Sabra11G0076200 Salix brachista HOM05D000002 ORTHO05D001134 6.4e-20 100.9 111 45.9
Ah.03g146900 Amaranthus hybridus HOM05D000002 ORTHO05D001134 1.4e-19 99.8 110 48.2
CANSAT01G0351 Cannabis sativa HOM05D000002 ORTHO05D001134 1.4e-19 99.8 111 45.0
Sabra11G0092000 Salix brachista HOM05D000002 ORTHO05D001134 1.4e-19 99.8 111 47.7
Sabra05G0016200 Salix brachista HOM05D000002 ORTHO05D001134 1.9e-19 99.4 111 46.8
Atru.chr1.3241 Acer truncatum HOM05D000002 ORTHO05D001134 7.1e-19 97.4 111 45.0
Migut.M00507 Erythranthe guttata HOM05D000002 ORTHO05D001134 9.2e-19 97.1 110 43.6
Cpa.g.sc100.30 Carica papaya HOM05D000002 ORTHO05D001134 2.7e-18 95.5 64 73.4
Sabra18G0065300 Salix brachista HOM05D000002 ORTHO05D001134 3.5e-18 95.1 111 44.1
CANSAT01G0629 Cannabis sativa HOM05D000002 ORTHO05D001134 4.6e-18 94.7 111 43.2
Sabra19G0009600 Salix brachista HOM05D000002 ORTHO05D001134 6.0e-18 94.4 111 44.1
CANSAT56G2162 Cannabis sativa HOM05D000002 ORTHO05D001134 7.8e-18 94.0 111 43.2
CANSAT01G1051 Cannabis sativa HOM05D000002 ORTHO05D001134 1.7e-17 92.8 111 43.2
CANSAT54G3019 Cannabis sativa HOM05D000002 ORTHO05D001134 6.6e-17 90.9 111 41.4
Ca_23898_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 8.7e-17 90.5 110 41.8
AUR62032617 Chenopodium quinoa HOM05D000202 ORTHO05D001134 1.1e-16 90.1 111 48.6
CANSAT01G2951 Cannabis sativa HOM05D000002 ORTHO05D001134 1.2e-15 86.7 119 39.5
AUR62040777 Chenopodium quinoa HOM05D000002 ORTHO05D000031 1.2e-15 86.7 111 45.9
Cpa.g.sc33.42 Carica papaya HOM05D000002 ORTHO05D001134 3.6e-15 85.1 61 67.2
AUR62029287 Chenopodium quinoa HOM05D000893 ORTHO05D001134 4.7e-15 84.7 111 45.0
Atru.chr13.1874 Acer truncatum HOM05D000002 ORTHO05D001134 6.2e-15 84.3 110 40.9
Cpa.g.sc79.36 Carica papaya HOM05D000002 ORTHO05D001134 1.8e-14 82.8 81 51.9
Atru.chr11.404 Acer truncatum HOM05D000002 ORTHO05D001134 3.1e-14 82.0 110 39.1
EL10Ac1g01667 Beta vulgaris HOM05D000002 ORTHO05D000001 4.0e-14 81.6 104 39.4
Sabra04G0092600 Salix brachista HOM05D000002 ORTHO05D001134 5.2e-14 81.3 86 45.3
Cpa.g.sc587.2 Carica papaya HOM05D000002 ORTHO05D001134 9.0e-14 80.5 64 60.9
THA.LOC104818495 Tarenaya hassleriana HOM05D000002 ORTHO05D001134 2.0e-13 79.3 111 40.5
Ah.10g027000 Amaranthus hybridus HOM05D000002 ORTHO05D001134 2.9e-12 75.5 98 39.8
Cpa.g.sc11.83 Carica papaya HOM05D000002 ORTHO05D001134 4.9e-12 74.7 61 57.4
Rhsim01G0098800 Rhododendron simsii HOM05D000002 ORTHO05D001134 4.9e-12 74.7 111 37.8
Cpa.g.sc28.66 Carica papaya HOM05D000002 ORTHO05D001134 4.2e-11 71.6 61 59.0
CANSAT35G0681 Cannabis sativa HOM05D000002 ORTHO05D001134 1.2e-10 70.1 78 42.3
Atru.chr8.1423 Acer truncatum HOM05D000002 ORTHO05D001134 1.6e-10 69.7 78 42.3
MD03G1045100 Malus domestica HOM05D000002 ORTHO05D001134 2.1e-10 69.3 113 33.6
Sabra16G0135200 Salix brachista HOM05D000002 ORTHO05D001134 3.5e-10 68.6 62 53.2
AT5G53670 Arabidopsis thaliana HOM05D000002 ORTHO05D001134 4.6e-10 68.2 106 37.7
CANSAT35G0076 Cannabis sativa HOM05D000002 ORTHO05D001134 4.6e-10 68.2 90 37.8
TPR.G29589 Trifolium pratense HOM05D000002 ORTHO05D001134 4.6e-10 68.2 75 44.0
Ah.01g010720 Amaranthus hybridus HOM05D000002 ORTHO05D001134 1.3e-09 66.6 101 38.6
BcaB05g23570 Brassica carinata HOM05D000002 ORTHO05D001134 1.3e-09 66.6 66 47.0
Sabra16G0095800 Salix brachista HOM05D000002 ORTHO05D001134 1.3e-09 66.6 110 37.3
Ah.10g026270 Amaranthus hybridus HOM05D000002 ORTHO05D001134 3.9e-09 65.1 110 39.1
Rhsim09G0102700 Rhododendron simsii HOM05D001650 ORTHO05D001592 3.9e-09 65.1 87 36.8
AUR62019719 Chenopodium quinoa HOM05D000002 ORTHO05D001134 6.6e-09 64.3 77 39.0
Thhalv10014701m.g Eutrema salsugineum HOM05D000002 ORTHO05D001134 6.6e-09 64.3 109 30.3
RcHm_v2.0_Chr3g0468531 Rosa chinensis HOM05D000002 ORTHO05D001134 1.1e-08 63.5 103 36.9
Sabra11G0075700 Salix brachista HOM05D000002 ORTHO05D001134 1.1e-08 63.5 103 35.0
Cpa.g.sc22.74 Carica papaya HOM05D000002 ORTHO05D001134 1.5e-08 63.2 95 35.8
AL281U10020 Arabidopsis lyrata HOM05D000002 ORTHO05D001134 1.9e-08 62.8 108 35.2
EL10Ac6g13863 Beta vulgaris HOM05D000002 ORTHO05D001134 2.5e-08 62.4 74 40.5
Cpa.g.sc63.11 Carica papaya HOM05D000002 ORTHO05D001134 2.5e-08 62.4 72 43.1
Rhsim01G0099200 Rhododendron simsii HOM05D000002 ORTHO05D001134 2.5e-08 62.4 111 32.4
CANSAT01G3173 Cannabis sativa HOM05D000002 ORTHO05D001134 3.3e-08 62.0 77 39.0
ECA232G4604 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-08 61.6 110 30.9
Cpa.g.sc274.2 Carica papaya HOM05D000002 ORTHO05D001134 9.6e-08 60.5 43 69.8
RcHm_v2.0_Chr6g0304521 Rosa chinensis HOM05D000002 ORTHO05D001134 9.6e-08 60.5 109 32.1
MD08G1232100 Malus domestica HOM05D000002 ORTHO05D001134 1.3e-07 60.1 110 30.9
CANSAT25G1544 Cannabis sativa HOM05D000002 ORTHO05D001134 1.6e-07 59.7 61 49.2
Hma1.2p1_0316F.1_g123000 Hydrangea macrophylla HOM05D000002 ORTHO05D001134 1.6e-07 59.7 111 31.5
Cpa.g.sc59.116 Carica papaya HOM05D000002 ORTHO05D001134 2.8e-07 58.9 86 41.9
ECA247G1429 Erigeron canadensis HOM05D000015 ORTHO05D000270 2.8e-07 58.9 110 30.0
ECA236G4726 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.6e-07 58.5 110 29.1
ECA238G3259 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.6e-07 58.5 110 30.0
RcHm_v2.0_Chr5g0073131 Rosa chinensis HOM05D000002 ORTHO05D001134 3.6e-07 58.5 83 38.6
RcHm_v2.0_Chr2g0086291 Rosa chinensis HOM05D000002 ORTHO05D001134 4.8e-07 58.2 109 31.2
ECA233G4495 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.2e-07 57.8 111 30.6
ECA240G3666 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.2e-07 57.8 110 29.1
ECA236G2821 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-06 57.0 110 28.2
ECA247G2898 Erigeron canadensis HOM05D000002 ORTHO05D001134 1.1e-06 57.0 112 28.6
ECA233G4438 Erigeron canadensis HOM05D000002 ORTHO05D001134 1.4e-06 56.6 110 29.1
Thhalv10015426m.g Eutrema salsugineum HOM05D000002 ORTHO05D001134 1.4e-06 56.6 107 30.8
Sp6g15780 Schrenkiella parvula HOM05D000375 ORTHO05D000240 1.4e-06 56.6 81 30.9
EL10Ac2g03401 Beta vulgaris HOM05D000002 ORTHO05D001134 1.8e-06 56.2 110 30.9
ECA232G2907 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-06 56.2 112 30.4
ECA238G4751 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.4e-06 55.8 110 28.2
CSS0016992 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 3.1e-06 55.5 113 31.9
ECA246G3903 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.1e-06 55.5 110 28.2
EL10Ac3g06924 Beta vulgaris HOM05D000030 ORTHO05D000009 4.0e-06 55.1 110 31.8
ECA246G2723 Erigeron canadensis HOM05D000002 ORTHO05D001134 4.0e-06 55.1 110 28.2
ECA247G1980 Erigeron canadensis HOM05D000315 ORTHO05D000001 4.0e-06 55.1 110 28.2
ECA236G2482 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.3e-06 54.7 110 28.2
ECA248G3467 Erigeron canadensis HOM05D000002 ORTHO05D001134 5.3e-06 54.7 110 29.1
GSVIVG01014104001 Vitis vinifera HOM05D000043 ORTHO05D000223 5.3e-06 54.7 111 31.5
ECA238G1308 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.9e-06 54.3 110 28.2
ECA240G2809 Erigeron canadensis HOM05D000002 ORTHO05D001134 6.9e-06 54.3 110 28.2
ECA248G0111 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.9e-06 54.3 110 28.2
ECA248G2070 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.9e-06 54.3 110 28.2
ECA238G2217 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.0e-06 53.9 111 29.7
ECA240G1911 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.0e-06 53.9 110 28.2
ECA240G3441 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.0e-06 53.9 110 28.2


User provided reference genes

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