Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc263.24 Carica papaya HOM05D002965 ORTHO05D011068 7.4e-110 400.6 207 100.0
Nitab4.5_0001761g0080 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.3e-66 256.9 180 77.8
Nitab4.5_0002558g0110 Nicotiana tabacum HOM05D002965 ORTHO05D011068 5.0e-66 255.0 189 75.1
Nitab4.5_0005831g0070 Nicotiana tabacum HOM05D002965 ORTHO05D010183 2.7e-59 232.6 177 72.9
Nitab4.5_0000172g1470 Nicotiana tabacum HOM05D002965 ORTHO05D010183 4.2e-49 198.7 189 64.6
Cfa022987 Carpinus fangiana HOM05D002965 ORTHO05D010183 1.8e-47 193.4 223 60.5
Nitab4.5_0002653g0030 Nicotiana tabacum HOM05D002965 ORTHO05D011068 5.2e-47 191.8 172 65.1
Nitab4.5_0002418g0070 Nicotiana tabacum HOM05D002965 ORTHO05D010183 8.9e-47 191.0 110 85.5
SabraMtG0001800 Salix brachista HOM05D001325 ORTHO05D001540 2.3e-42 176.4 101 89.1
Peaxi162Scf00863g00003 Petunia axillaris HOM05D002965 ORTHO05D011068 5.0e-42 175.3 188 55.9
Ca_28560_v3 Cicer arietinum L. HOM05D002965 ORTHO05D010536 9.5e-41 171.0 102 84.3
Sopen05g012840 Solanum pennellii HOM05D002965 ORTHO05D010183 3.4e-38 162.5 82 95.1
Nitab4.5_0005613g0030 Nicotiana tabacum HOM05D002965 ORTHO05D011068 5.8e-38 161.8 149 61.1
CSS0045201 Camellia sinensis var. sinensis HOM05D002965 ORTHO05D011068 2.2e-37 159.8 118 78.0
Nitab4.5_0001796g0200 Nicotiana tabacum HOM05D002965 ORTHO05D011068 3.7e-37 159.1 81 91.4
SGA_v2.0_scaffold479G52282 Striga asiatica HOM05D002965 ORTHO05D010183 1.1e-36 157.5 87 88.5
unitig_87.g27935 Utricularia gibba HOM05D002965 ORTHO05D010183 1.5e-33 147.1 85 83.5
Sopen06g007640 Solanum pennellii HOM05D002965 ORTHO05D012151 7.3e-33 144.8 82 87.8
ECA246G1890 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.5e-33 144.4 81 85.2
Eucgr.C02171 Eucalyptus grandis HOM05D002965 ORTHO05D011068 2.4e-28 129.8 88 83.0
ATMG01130 Arabidopsis thaliana HOM05D002965 ORTHO05D011068 1.3e-26 124.0 112 69.6
Haze_01424 Corylus avellana HOM05D022652 ORTHO05D011068 8.6e-26 121.3 188 46.8
Haze_01425 Corylus avellana HOM05D022652 ORTHO05D011068 8.6e-26 121.3 188 46.8
Nitab4.5_0000580g0190 Nicotiana tabacum HOM05D002965 ORTHO05D011068 8.9e-23 111.3 57 93.0
Aa31csc822G20 Aethionema arabicum HOM05D002965 ORTHO05D011068 4.4e-22 109.0 88 71.6
PGSC0003DMG400017419 Solanum tuberosum HOM05D002965 ORTHO05D011068 6.4e-21 105.1 64 85.9
Nitab4.5_0001763g0110 Nicotiana tabacum HOM05D002965 ORTHO05D011068 1.1e-20 104.4 171 42.1
Peaxi162Scf02014g00001 Petunia axillaris HOM05D016050 ORTHO05D011068 2.1e-19 100.1 66 77.3
Nitab4.5_0004376g0100 Nicotiana tabacum HOM05D000445 ORTHO05D000314 4.6e-19 99.0 87 67.8
Sed0028066 Sechium edule HOM05D002965 ORTHO05D010183 5.1e-18 95.5 56 87.5
CAN.G1439.3 Capsicum annuum HOM05D002965 ORTHO05D010183 1.2e-16 90.9 126 46.8
Dinv06704 Davidia involucrata HOM05D002965 ORTHO05D010183 1.2e-16 90.9 44 100.0
SHI27034 Sapria himalayana HOM05D023343 ORTHO05D011068 8.9e-15 84.7 53 75.5
CsaV3_UNG209190 Cucumis sativus L. HOM05D016050 ORTHO05D011068 1.2e-14 84.3 48 85.4
ClCG01G010190 Citrullus lanatus HOM05D042035 ORTHO05D016641 3.4e-14 82.8 44 84.1
RhsimMtG0001000 Rhododendron simsii HOM05D000743 ORTHO05D000580 7.6e-14 81.6 45 91.1
Thhalv10022991m.g Eutrema salsugineum HOM05D016050 ORTHO05D011068 4.9e-13 79.0 65 67.7
Nitab4.5_0000886g0150 Nicotiana tabacum HOM05D002965 ORTHO05D011068 1.4e-12 77.4 174 35.1
SHI25680 Sapria himalayana HOM05D022652 ORTHO05D011068 7.1e-12 75.1 44 77.3
Nitab4.5_0000215g0070 Nicotiana tabacum HOM05D002965 ORTHO05D011068 2.3e-10 70.1 58 65.5
BolC1t03459H Brassica oleracea HOM05D002965 ORTHO05D011068 1.9e-09 67.0 66 57.6
Nitab4.5_0000859g0140 Nicotiana tabacum HOM05D002965 ORTHO05D011068 1.2e-08 64.3 43 79.1
Nitab4.5_0002072g0110 Nicotiana tabacum HOM05D002965 ORTHO05D011068 2.1e-08 63.5 34 85.3
SHI27232 Sapria himalayana HOM05D022652 ORTHO05D011068 8.1e-08 61.6 42 61.9
Solyc04g051275.1 Solanum lycopersicum HOM05D002965 ORTHO05D011068 8.1e-08 61.6 59 64.4
Solyc10g018950.1 Solanum lycopersicum HOM05D002965 ORTHO05D010183 8.1e-08 61.6 43 69.8
MELO3C023755.2 Cucumis melo HOM05D066561 ORTHO05D011068 4.0e-07 59.3 63 58.7
Nitab4.5_0000215g0080 Nicotiana tabacum HOM05D002965 ORTHO05D011068 4.0e-07 59.3 49 57.1
Psat3g040160 Pisum sativum HOM05D004537 ORTHO05D005492 2.0e-06 57.0 138 36.2


User provided reference genes

Program Settings