Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc263.23 Carica papaya HOM05D002965 ORTHO05D010183 1.8e-75 285.8 143 100.0
Hma1.2p1_1338F.1_g276549 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 1.4e-70 269.6 143 95.8
Hma1.2p1_1338F.1_g276560 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 1.4e-70 269.6 143 95.8
CAN.G309.4 Capsicum annuum HOM05D002965 ORTHO05D010183 2.6e-66 255.4 138 93.5
Medtr0082s0280 Medicago truncatula HOM05D002965 ORTHO05D010183 5.0e-65 251.1 128 96.9
QL05p039661 Quercus lobata HOM05D002965 ORTHO05D010183 8.5e-65 250.4 128 96.1
CsaV3_UNG209220 Cucumis sativus L. HOM05D002965 ORTHO05D010183 1.4e-64 249.6 133 94.7
LjContig00315g0010995 Lotus japonicus HOM05D002965 ORTHO05D010183 3.6e-63 245.0 125 96.8
SalBow1G8555 Salvia bowleyana HOM05D002965 ORTHO05D010183 1.4e-62 243.0 136 89.7
Ca_28103_v3 Cicer arietinum L. HOM05D003430 ORTHO05D004809 1.1e-61 240.0 123 95.9
Dinv06704 Davidia involucrata HOM05D002965 ORTHO05D010183 1.5e-61 239.6 123 96.7
arahy.Tifrunner.gnm1.ann1.CG3D8R Arachis hypogaea HOM05D002965 ORTHO05D010183 2.6e-61 238.8 128 93.8
arahy.Tifrunner.gnm1.ann1.EP7E6M Arachis hypogaea HOM05D002965 ORTHO05D010183 2.6e-61 238.8 128 93.8
arahy.Tifrunner.gnm1.ann1.I1QAK6 Arachis hypogaea HOM05D002965 ORTHO05D010183 2.6e-61 238.8 128 93.8
Ah.10g028480 Amaranthus hybridus HOM05D002965 ORTHO05D010183 5.7e-61 237.7 123 95.9
Sed0028066 Sechium edule HOM05D002965 ORTHO05D010183 4.8e-60 234.6 121 95.0
Sopen05g012840 Solanum pennellii HOM05D002965 ORTHO05D010183 3.1e-59 231.9 120 95.8
Sp3g25630 Schrenkiella parvula HOM05D002965 ORTHO05D010183 5.3e-59 231.1 143 85.3
Nitab4.5_0005831g0070 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.0e-57 226.9 138 85.5
Actinidia10888 Actinidia chinensis HOM05D002965 ORTHO05D010183 9.4e-56 220.3 113 96.5
Nitab4.5_0005613g0040 Nicotiana tabacum HOM05D002965 ORTHO05D010183 2.7e-55 218.8 124 86.3
TPR.G40481 Trifolium pratense HOM05D002965 ORTHO05D010183 6.5e-49 197.6 102 97.1
SGA_v2.0_scaffold479G52282 Striga asiatica HOM05D002965 ORTHO05D010183 1.9e-48 196.1 101 95.0
Nitab4.5_0000172g1470 Nicotiana tabacum HOM05D002965 ORTHO05D010183 6.8e-46 187.6 124 78.2
unitig_87.g27935 Utricularia gibba HOM05D002965 ORTHO05D010183 1.3e-44 183.3 99 91.9
Psat3g040160 Pisum sativum HOM05D004537 ORTHO05D005492 5.4e-43 177.9 118 80.5
Hma1.2p1_0000F.1_g000060 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 7.7e-42 174.1 95 88.4
Hma1.2p1_0204F.1_g086870 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 1.0e-41 173.7 102 86.3
HanXRQChr08g0212281 Helianthus annuus HOM05D002965 ORTHO05D010183 1.9e-40 169.5 98 90.8
HanXRQMTg0579441 Helianthus annuus HOM05D002965 ORTHO05D010183 1.9e-40 169.5 98 90.8
Lsat_1_v5_gn_4_66041 Lactuca sativa HOM05D002965 ORTHO05D010183 1.2e-39 166.8 98 89.8
Nitab4.5_0001761g0080 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.0e-38 163.7 86 93.0
RcHm_v2.0_MTg0499241 Rosa chinensis HOM05D002965 ORTHO05D010183 5.2e-38 161.4 83 97.6
Aqoxy1G02687 Aquilegia oxysepala HOM05D002965 ORTHO05D010183 1.2e-37 160.2 91 91.2
Medtr5g040110 Medicago truncatula HOM05D002965 ORTHO05D010183 4.4e-37 158.3 83 96.4
CAN.G1439.3 Capsicum annuum HOM05D002965 ORTHO05D010183 7.5e-37 157.5 101 82.2
Potri.007G061981 Populus trichocarpa HOM05D002965 ORTHO05D010183 7.5e-37 157.5 85 94.1
Psat6g191080 Pisum sativum HOM05D002965 ORTHO05D010183 2.8e-36 155.6 86 86.0
CAN.G1576.4 Capsicum annuum HOM05D002965 ORTHO05D010183 1.1e-35 153.7 101 82.2
SHI48910 Sapria himalayana HOM05D002965 ORTHO05D010183 2.3e-33 146.0 78 93.6
MELO3C031425.2 Cucumis melo HOM05D002965 ORTHO05D010183 5.0e-33 144.8 92 79.3
BNapus_Darmor_BZH_scaffold_234p00020 Brassica napus HOM05D002965 ORTHO05D010183 7.3e-32 141.0 79 92.4
BolSC28t60382H Brassica oleracea HOM05D002965 ORTHO05D010183 7.3e-32 141.0 79 92.4
BolSC28t60415H Brassica oleracea HOM05D002965 ORTHO05D010183 7.3e-32 141.0 79 92.4
BraSC177t45752Z Brassica rapa HOM05D002965 ORTHO05D010183 7.3e-32 141.0 79 92.4
Hma1.2p1_0713F.1_g207720 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 1.6e-31 139.8 82 91.5
CDE02G3239 Ceratophyllum demersum HOM05D002965 ORTHO05D010183 4.7e-31 138.3 88 80.7
Solyc10g018950.1 Solanum lycopersicum HOM05D002965 ORTHO05D010183 7.5e-29 131.0 85 75.3
Sopen05g007970 Solanum pennellii HOM05D002965 ORTHO05D010183 1.3e-28 130.2 65 95.4
ATMG01120 Arabidopsis thaliana HOM05D002965 ORTHO05D010183 3.7e-28 128.6 64 98.4
Peaxi162Scf00197g00037 Petunia axillaris HOM05D002965 ORTHO05D010183 1.4e-27 126.7 90 76.7
Nitab4.5_0002418g0070 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.2e-26 123.6 66 87.9
RhsimMtG0001000 Rhododendron simsii HOM05D000743 ORTHO05D000580 6.0e-26 121.3 71 88.7
BraSC48t46251Z Brassica rapa HOM05D002965 ORTHO05D010183 3.0e-25 119.0 64 95.3
VMungo0647G1384 Vigna mungo HOM05D002965 ORTHO05D010183 5.0e-25 118.2 63 93.7
Solyc00g118690.1 Solanum lycopersicum HOM05D002965 ORTHO05D010183 6.6e-25 117.9 63 95.2
CAN.G285.11 Capsicum annuum HOM05D002965 ORTHO05D010183 8.6e-25 117.5 64 93.8
CAN.G390.19 Capsicum annuum HOM05D002965 ORTHO05D010183 5.6e-24 114.8 72 84.7
CSS0026545 Camellia sinensis var. sinensis HOM05D002965 ORTHO05D010183 1.2e-23 113.6 101 63.4
CAN.G1061.19 Capsicum annuum HOM05D002965 ORTHO05D010183 1.2e-23 113.6 60 95.0
Lalb_Chr00c21g0405781 Lupinus albus HOM05D002965 ORTHO05D010183 1.4e-22 110.2 56 96.4
ECA039G0012 Erigeron canadensis HOM05D002965 ORTHO05D010183 5.2e-22 108.2 55 98.2
Cfa022987 Carpinus fangiana HOM05D002965 ORTHO05D010183 8.9e-22 107.5 53 100.0
SabraMtG0001800 Salix brachista HOM05D001325 ORTHO05D001540 8.9e-22 107.5 86 69.8
Nitab4.5_0001796g0410 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.2e-21 107.1 56 92.9
Nitab4.5_0002558g0140 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.7e-20 103.2 60 86.7
CDE02G2102 Ceratophyllum demersum HOM05D002965 ORTHO05D010183 9.2e-19 97.4 115 52.2
SMO053G0011 Selaginella moellendorffii HOM05D002965 ORTHO05D010183 1.6e-18 96.7 68 66.2
Mapoly0013s0013 Marchantia polymorpha HOM05D002965 ORTHO05D010183 8.6e-17 90.9 65 64.6
Nitab4.5_0000859g0160 Nicotiana tabacum HOM05D002965 ORTHO05D010183 8.1e-15 84.3 73 60.3
SHI29064 Sapria himalayana HOM05D002965 ORTHO05D010183 1.7e-12 76.6 63 63.5
SHI41349 Sapria himalayana HOM05D037518 ORTHO05D010183 1.6e-10 70.1 72 55.6
Dinv34203 Davidia involucrata HOM05D002965 ORTHO05D010183 2.7e-10 69.3 40 85.0
BolC7t41501H Brassica oleracea HOM05D002965 ORTHO05D010183 6.0e-10 68.2 36 88.9
QL02p008127 Quercus lobata HOM05D003783 ORTHO05D004568 1.9e-08 63.2 38 81.6
Nitab4.5_0000580g0190 Nicotiana tabacum HOM05D002965 ORTHO05D011068 6.2e-07 58.2 33 81.8
CAN.G1298.18 Capsicum annuum HOM05D000533 ORTHO05D002807 5.2e-06 55.1 69 46.4
FAN01G0230 Fragaria x ananassa HOM05D000533 ORTHO05D002807 8.9e-06 54.3 62 53.2


User provided reference genes

Program Settings