Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc263.12 Carica papaya HOM05D008168 ORTHO05D010284 4.3e-144 514.6 255 100.0
Nitab4.5_0001761g0090 Nicotiana tabacum HOM05D008168 ORTHO05D010284 2.4e-102 375.9 259 76.1
Nitab4.5_0000172g2220 Nicotiana tabacum HOM05D008168 ORTHO05D010284 4.8e-95 351.7 264 72.0
Dinv06690 Davidia involucrata HOM05D008168 ORTHO05D010284 1.0e-84 317.4 161 96.9
CiPaw.12G057800 Carya illinoinensis HOM05D008168 ORTHO05D010284 2.2e-84 316.2 162 96.9
HanXRQChr08g0236051 Helianthus annuus HOM05D008168 ORTHO05D010284 2.1e-82 309.7 161 95.0
Lsat_1_v5_gn_5_185960 Lactuca sativa HOM05D008168 ORTHO05D010284 4.7e-82 308.5 161 94.4
Sed0019148 Sechium edule HOM05D008168 ORTHO05D010284 3.4e-80 302.4 157 94.9
TPR.G35326 Trifolium pratense HOM05D008168 ORTHO05D010284 8.3e-79 297.7 161 93.2
Actinidia34824 Actinidia chinensis HOM05D008168 ORTHO05D010284 2.4e-78 296.2 161 90.7
HanXRQChr01g0029671 Helianthus annuus HOM05D008168 ORTHO05D010284 2.3e-76 289.7 161 89.4
Nitab4.5_0001919g0090 Nicotiana tabacum HOM05D008168 ORTHO05D010284 9.5e-67 257.7 248 61.7
CAN.G1632.16 Capsicum annuum HOM05D008168 ORTHO05D010284 5.4e-62 241.9 125 93.6
CAN.G298.7 Capsicum annuum HOM05D008168 ORTHO05D010284 5.4e-62 241.9 125 93.6
unitig_87.g27979 Utricularia gibba HOM05D008168 ORTHO05D010284 9.2e-62 241.1 125 92.0
Sp3g25580 Schrenkiella parvula HOM05D008168 ORTHO05D010284 4.3e-59 232.3 161 75.8
CsaV3_6G025200 Cucumis sativus L. HOM05D008168 ORTHO05D010284 4.7e-58 228.8 120 92.5
CsaV3_6G025280 Cucumis sativus L. HOM05D008168 ORTHO05D010284 4.7e-58 228.8 120 92.5
Nitab4.5_0004030g0020 Nicotiana tabacum HOM05D008168 ORTHO05D010284 7.5e-56 221.5 121 88.4
MBI05_g05357_MAGBIO Magnolia biondii HOM05D008168 ORTHO05D010284 6.6e-52 208.4 166 68.7
Gohir.A03G133725 Gossypium hirsutum HOM05D008168 ORTHO05D010284 1.1e-51 207.6 141 76.6
Nitab4.5_0002558g0090 Nicotiana tabacum HOM05D008168 ORTHO05D010284 2.0e-48 196.8 254 49.6
Sp5g20300 Schrenkiella parvula HOM05D008168 ORTHO05D010284 1.7e-47 193.7 161 65.8
Nitab4.5_0000127g0080 Nicotiana tabacum HOM05D008168 ORTHO05D010284 2.7e-45 186.4 108 85.2
AT2G07641 Arabidopsis thaliana HOM05D008168 ORTHO05D010284 2.5e-43 179.9 93 94.6
CsaV3_6G024000 Cucumis sativus L. HOM05D008168 ORTHO05D010284 2.8e-42 176.4 113 78.8
BraSC159t45716Z Brassica rapa HOM05D008168 ORTHO05D010284 1.4e-41 174.1 94 92.6
FAN20G1169 Fragaria x ananassa HOM05D008168 ORTHO05D010284 2.4e-41 173.3 112 81.2
AUR62043793 Chenopodium quinoa HOM05D008168 ORTHO05D010284 9.9e-40 167.9 254 45.3
AUR62043904 Chenopodium quinoa HOM05D008168 ORTHO05D010284 9.9e-40 167.9 254 45.3
AUR62043912 Chenopodium quinoa HOM05D008168 ORTHO05D010284 9.9e-40 167.9 254 45.3
EL10Ac7g17837 Beta vulgaris HOM05D008168 ORTHO05D010284 3.2e-38 162.9 101 80.2
Nitab4.5_0006806g0090 Nicotiana tabacum HOM05D008168 ORTHO05D010284 3.2e-38 162.9 254 43.7
FAN26G1478 Fragaria x ananassa HOM05D008168 ORTHO05D010284 9.3e-38 161.4 106 78.3
Nitab4.5_0000788g0030 Nicotiana tabacum HOM05D008168 ORTHO05D010284 1.0e-36 157.9 166 59.6
Thecc.08G162700 Theobroma cacao HOM05D008168 ORTHO05D010284 4.8e-34 149.1 97 74.2
CDE02G1379 Ceratophyllum demersum HOM05D008168 ORTHO05D010284 2.4e-30 136.7 88 79.5
FAN20G1320 Fragaria x ananassa HOM05D008168 ORTHO05D010284 7.1e-30 135.2 72 93.1
CAN.G76.5 Capsicum annuum HOM05D008168 ORTHO05D010284 9.3e-30 134.8 71 90.1
Dinv08421 Davidia involucrata HOM05D008168 ORTHO05D010284 9.3e-30 134.8 71 88.7
MBI10_g03713_MAGBIO Magnolia biondii HOM05D008168 ORTHO05D010284 1.3e-28 131.0 103 71.8
Lsat_1_v5_gn_3_75761 Lactuca sativa HOM05D008168 ORTHO05D010284 9.6e-27 124.8 68 89.7
CAN.G1632.15 Capsicum annuum HOM05D008168 ORTHO05D010284 2.1e-26 123.6 71 84.5
Cpa.g.sc405.7 Carica papaya HOM05D000751 ORTHO05D000889 9.0e-25 118.2 59 96.6
BraSC54t46354Z Brassica rapa HOM05D008168 ORTHO05D010284 1.2e-24 117.9 100 65.0
Nitab4.5_0000172g0840 Nicotiana tabacum HOM05D008168 ORTHO05D010284 1.5e-24 117.5 71 83.1
RcHm_v2.0_MTg0498271 Rosa chinensis HOM05D008168 ORTHO05D010284 5.6e-19 99.0 81 69.1
HanXRQChr10g0297211 Helianthus annuus HOM05D008168 ORTHO05D010284 7.4e-19 98.6 86 62.8
Nitab4.5_0008916g0060 Nicotiana tabacum HOM05D008168 ORTHO05D010284 3.7e-18 96.3 64 75.0
ECA039G0016 Erigeron canadensis HOM05D008168 ORTHO05D010284 9.0e-17 91.7 50 92.0
Hma1.2p1_0734F.1_g210340 Hydrangea macrophylla HOM05D002010 ORTHO05D001602 4.9e-15 85.9 63 71.4
Nitab4.5_0000127g0070 Nicotiana tabacum HOM05D008168 ORTHO05D010284 4.9e-15 85.9 60 70.0
AUR62034210 Chenopodium quinoa HOM05D008168 ORTHO05D010284 4.2e-14 82.8 44 88.6
Nitab4.5_0002418g0060 Nicotiana tabacum HOM05D017255 ORTHO05D022975 5.5e-14 82.4 56 76.8
Phvul.011G101750 Phaseolus vulgaris HOM05D008168 ORTHO05D010284 8.7e-12 75.1 37 91.9
Sp3g25590 Schrenkiella parvula HOM05D008168 ORTHO05D010284 6.9e-09 65.5 32 96.9
Nn3g20243 Nelumbo nucifera HOM05D008168 ORTHO05D010284 4.2e-06 56.2 29 89.7


User provided reference genes

Program Settings