Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc263.10 Carica papaya HOM05D000533 ORTHO05D011488 3.3e-29 131.0 63 100.0
Aqoxy3G01142 Aquilegia oxysepala HOM05D000533 ORTHO05D011488 1.6e-28 128.6 63 98.4
CsaV3_6G023980 Cucumis sativus L. HOM05D000533 ORTHO05D011488 8.1e-28 126.3 63 96.8
CsaV3_6G025260 Cucumis sativus L. HOM05D000533 ORTHO05D011488 8.1e-28 126.3 63 96.8
CsaV3_UNG208480 Cucumis sativus L. HOM05D000533 ORTHO05D011488 8.1e-28 126.3 63 96.8
ATR0645G003 Amborella trichopoda HOM05D000533 ORTHO05D011488 5.3e-27 123.6 63 95.2
Lalb_Chr00c54g0413551 Lupinus albus HOM05D000533 ORTHO05D011488 5.3e-27 123.6 63 95.2
CiPaw.12G057700 Carya illinoinensis HOM05D000533 ORTHO05D011488 1.2e-26 122.5 63 93.7
CARHR287180 Cardamine hirsuta HOM05D000533 ORTHO05D011488 2.0e-26 121.7 63 93.7
Lsat_1_v5_gn_7_67841 Lactuca sativa HOM05D000533 ORTHO05D011488 2.6e-26 121.3 63 93.7
arahy.Tifrunner.gnm1.ann1.20VADI Arachis hypogaea HOM05D000533 ORTHO05D011488 7.6e-26 119.8 63 92.1
arahy.Tifrunner.gnm1.ann1.2U5581 Arachis hypogaea HOM05D000533 ORTHO05D011488 7.6e-26 119.8 63 92.1
arahy.Tifrunner.gnm1.ann1.EH7RRY Arachis hypogaea HOM05D000533 ORTHO05D011488 7.6e-26 119.8 63 92.1
unitig_87.g27978 Utricularia gibba HOM05D000533 ORTHO05D011488 1.0e-25 119.4 63 92.1
Lalb_Chr01g0010861 Lupinus albus HOM05D000533 ORTHO05D011488 2.9e-25 117.9 63 90.5
Phvul.011G124215 Phaseolus vulgaris HOM05D000533 ORTHO05D011488 1.9e-24 115.2 62 88.7
HanXRQChr14g0434371 Helianthus annuus HOM05D000533 ORTHO05D001069 4.2e-24 114.0 60 91.7
HanXRQMTg0579581 Helianthus annuus HOM05D000533 ORTHO05D001069 4.2e-24 114.0 60 91.7
HanXRQChr10g0297221 Helianthus annuus HOM05D000533 ORTHO05D011488 5.5e-24 113.6 63 88.9
RhsimMtG0002300 Rhododendron simsii HOM05D000533 ORTHO05D001069 4.6e-23 110.5 56 92.9
SabraMtG0006600 Salix brachista HOM05D000533 ORTHO05D001069 1.8e-22 108.6 62 83.9
Solyc00g500183.1 Solanum lycopersicum HOM05D000533 ORTHO05D011488 2.3e-22 108.2 56 91.1
Lalb_Chr00c24g0407321 Lupinus albus HOM05D000533 ORTHO05D011488 1.6e-20 102.1 54 90.7
GSVIVG01004958001 Vitis vinifera HOM05D000533 ORTHO05D001069 1.8e-19 98.6 54 92.6
CANSAT16G0052 Cannabis sativa HOM05D000533 ORTHO05D001069 3.1e-19 97.8 54 88.9
Nn1g10104 Nelumbo nucifera HOM05D000533 ORTHO05D001069 3.1e-19 97.8 54 88.9
Sed0003286 Sechium edule HOM05D000533 ORTHO05D001069 4.1e-19 97.4 48 97.9
Hma1.2p1_0386F.1_g141700 Hydrangea macrophylla HOM05D000533 ORTHO05D001069 1.2e-18 95.9 54 87.0
DCAR_032449 Daucus carota HOM05D000533 ORTHO05D001069 4.5e-18 94.0 54 85.2
ATMG00510 Arabidopsis thaliana HOM05D000533 ORTHO05D001069 5.9e-18 93.6 54 85.2
PGSC0003DMG400013204 Solanum tuberosum HOM05D000533 ORTHO05D011488 7.6e-18 93.2 54 87.0
SHI36143 Sapria himalayana HOM05D000533 ORTHO05D011488 1.3e-17 92.4 54 85.2
Sed0012936 Sechium edule HOM05D000533 ORTHO05D001069 1.7e-17 92.0 44 100.0
Nitab4.5_0000859g0010 Nicotiana tabacum HOM05D000533 ORTHO05D011488 2.5e-16 88.2 58 75.9
Sp3g25570 Schrenkiella parvula HOM05D000533 ORTHO05D001069 2.5e-16 88.2 47 91.5
GSVIVG01004967001 Vitis vinifera HOM05D000533 ORTHO05D011488 5.5e-16 87.0 54 85.2
Sp5g20290 Schrenkiella parvula HOM05D000533 ORTHO05D011488 7.2e-16 86.7 62 72.6
Mapoly0011s0058 Marchantia polymorpha HOM05D000533 ORTHO05D001069 1.1e-13 79.3 53 71.7
AagrBONN_evm.TU.Sc2ySwM_117.4105 Anthoceros agrestis HOM05D000533 ORTHO05D001069 1.5e-13 79.0 54 70.4
Glyma.14G103300 Glycine max HOM05D000533 ORTHO05D001069 3.3e-13 77.8 47 78.7
SHI51311 Sapria himalayana HOM05D000533 ORTHO05D011488 4.8e-12 73.9 54 75.9
Phvul.009G072400 Phaseolus vulgaris HOM05D000533 ORTHO05D011488 1.8e-11 72.0 45 80.0
LjContig00315g0008577 Lotus japonicus HOM05D000533 ORTHO05D001069 2.4e-11 71.6 38 92.1
Aa31csc1081G30 Aethionema arabicum HOM05D000533 ORTHO05D001069 9.1e-11 69.7 46 76.1
Cre09.g405850 Chlamydomonas reinhardtii HOM05D000533 ORTHO05D001069 1.5e-10 68.9 48 64.6
Cfa022526 Carpinus fangiana HOM05D000533 ORTHO05D001069 3.4e-10 67.8 52 57.7
Nitab4.5_0001034g0060 Nicotiana tabacum HOM05D000533 ORTHO05D011488 4.5e-10 67.4 41 78.0
PRCOL_00000735 Prasinoderma coloniale HOM05D000533 ORTHO05D001069 4.5e-10 67.4 53 60.4
Haze_27200 Corylus avellana HOM05D000533 ORTHO05D001069 2.9e-09 64.7 47 63.8
Haze_26686 Corylus avellana HOM05D000533 ORTHO05D001069 1.9e-08 62.0 49 59.2
Nitab4.5_0015438g0010 Nicotiana tabacum HOM05D007877 ORTHO05D009957 1.2e-07 59.3 32 87.5
SHI35303 Sapria himalayana HOM05D011739 ORTHO05D012473 4.6e-07 57.4 32 84.4
BolSC28t60428H Brassica oleracea HOM05D000533 ORTHO05D011488 3.9e-06 54.3 30 86.7
Peaxi162Scf00197g00046 Petunia axillaris HOM05D000533 ORTHO05D011488 5.1e-06 53.9 30 83.3


User provided reference genes

Program Settings