Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc2600.1 Carica papaya HOM05D000307 ORTHO05D000166 2.3e-42 175.3 93 100.0
Cpa.g.sc1643.1 Carica papaya HOM05D000307 ORTHO05D000166 2.8e-16 88.6 95 54.7
Cpa.g.sc117.24 Carica papaya HOM05D000307 ORTHO05D000166 1.5e-14 82.8 94 52.1
Cpa.g.sc51.120 Carica papaya HOM05D000307 ORTHO05D000166 2.2e-13 79.0 95 46.3
Cpa.g.c36543 Carica papaya HOM05D000307 ORTHO05D000166 5.4e-12 74.3 104 41.3
Cpa.g.sc117.23 Carica papaya HOM05D000307 ORTHO05D000166 7.8e-11 70.5 95 45.3
Cpa.g.sc117.19 Carica papaya HOM05D000307 ORTHO05D000166 2.3e-10 68.9 103 41.7
Cpa.g.c39415 Carica papaya HOM05D000307 ORTHO05D000166 6.6e-10 67.4 90 41.1
Cpa.g.sc117.18 Carica papaya HOM05D000307 ORTHO05D000166 6.6e-10 67.4 94 38.3
Ca_18733_v3 Cicer arietinum L. HOM05D000307 ORTHO05D000166 1.1e-09 66.6 95 36.8
Prupe.1G533700 Prunus persica HOM05D000307 ORTHO05D000166 1.1e-09 66.6 95 37.9
COL.COLO4_22983 Corchorus olitorius HOM05D000307 ORTHO05D000166 3.3e-09 65.1 104 35.6
FvH4_7g09730 Fragaria vesca HOM05D000307 ORTHO05D000166 3.3e-09 65.1 102 36.3
CANSAT25G3868 Cannabis sativa HOM05D000307 ORTHO05D000166 4.3e-09 64.7 94 39.4
Glyma.18G042000 Glycine max HOM05D000307 ORTHO05D000166 4.3e-09 64.7 94 37.2
Phvul.001G228600 Phaseolus vulgaris HOM05D000307 ORTHO05D000166 4.3e-09 64.7 94 37.2
CANSAT54G0061 Cannabis sativa HOM05D000307 ORTHO05D000166 5.6e-09 64.3 94 38.3
FAN02G1044 Fragaria x ananassa HOM05D000307 ORTHO05D000166 5.6e-09 64.3 98 36.7
Potri.013G001700 Populus trichocarpa HOM05D000307 ORTHO05D000166 5.6e-09 64.3 94 37.2
FvH4_6g21170 Fragaria vesca HOM05D000307 ORTHO05D000166 7.3e-09 63.9 98 36.7
FAN14G1606 Fragaria x ananassa HOM05D000307 ORTHO05D000166 7.3e-09 63.9 98 36.7
CANSAT25G0093 Cannabis sativa HOM05D000307 ORTHO05D000166 9.6e-09 63.5 94 38.3
Cpa.g.sc51.124 Carica papaya HOM05D000307 ORTHO05D000166 9.6e-09 63.5 95 35.8
Lj6g0024616 Lotus japonicus HOM05D000307 ORTHO05D000166 9.6e-09 63.5 95 35.8
TPR.G23204 Trifolium pratense HOM05D000307 ORTHO05D000166 9.6e-09 63.5 95 35.8
VMungo1383G0696 Vigna mungo HOM05D000307 ORTHO05D000166 9.6e-09 63.5 94 37.2
Cpa.g.c40189 Carica papaya HOM05D000307 ORTHO05D000166 1.3e-08 63.2 87 42.5
COL.COLO4_22948 Corchorus olitorius HOM05D000307 ORTHO05D000166 1.3e-08 63.2 104 34.6
Medtr3g065100 Medicago truncatula HOM05D000307 ORTHO05D000166 1.3e-08 63.2 95 35.8
Potri.005G002400 Populus trichocarpa HOM05D000307 ORTHO05D000166 1.3e-08 63.2 94 36.2
arahy.Tifrunner.gnm1.ann1.5M65ZF Arachis hypogaea HOM05D000307 ORTHO05D000166 1.6e-08 62.8 105 35.2
CiPaw.14G012300 Carya illinoinensis HOM05D000307 ORTHO05D000166 2.1e-08 62.4 109 35.8
CiPaw.14G012400 Carya illinoinensis HOM05D000307 ORTHO05D000166 2.1e-08 62.4 94 37.2
Ca_17084_v3 Cicer arietinum L. HOM05D000307 ORTHO05D000166 2.1e-08 62.4 95 34.7
Haze_15022 Corylus avellana HOM05D000307 ORTHO05D000166 2.1e-08 62.4 104 34.6
FAN02G2752 Fragaria x ananassa HOM05D000307 ORTHO05D000166 2.8e-08 62.0 94 34.0
Glyma.11G214600 Glycine max HOM05D000307 ORTHO05D000166 2.8e-08 62.0 94 36.2
PGR042G0904 Punica granatum HOM05D000307 ORTHO05D000166 2.8e-08 62.0 94 36.2
QL04p024253 Quercus lobata HOM05D000307 ORTHO05D000166 2.8e-08 62.0 98 35.7
CANSAT25G0806 Cannabis sativa HOM05D000307 ORTHO05D000166 3.6e-08 61.6 94 37.2
Ciclev10024463m.g Citrus clementina HOM05D000307 ORTHO05D000166 3.6e-08 61.6 94 35.1
FvH4_6g08570 Fragaria vesca HOM05D000307 ORTHO05D000166 3.6e-08 61.6 98 33.7
FAN02G1978 Fragaria x ananassa HOM05D000307 ORTHO05D000166 3.6e-08 61.6 98 33.7
FAN05G3770 Fragaria x ananassa HOM05D000307 ORTHO05D000166 3.6e-08 61.6 98 33.7
FAN09G4665 Fragaria x ananassa HOM05D000307 ORTHO05D000166 3.6e-08 61.6 98 33.7
FAN14G4638 Fragaria x ananassa HOM05D000307 ORTHO05D000166 3.6e-08 61.6 98 33.7
Thecc.05G329800 Theobroma cacao HOM05D000307 ORTHO05D000166 3.6e-08 61.6 104 35.6
GSVIVG01031333001 Vitis vinifera HOM05D000307 ORTHO05D000166 3.6e-08 61.6 104 34.6
Cpa.g.sc15.142 Carica papaya HOM05D000307 ORTHO05D000166 4.8e-08 61.2 68 45.6
Cfa004392 Carpinus fangiana HOM05D000307 ORTHO05D000166 4.8e-08 61.2 104 33.7
FvH4_6g08460 Fragaria vesca HOM05D000307 ORTHO05D000166 4.8e-08 61.2 94 34.0
FAN05G4635 Fragaria x ananassa HOM05D000307 ORTHO05D000166 4.8e-08 61.2 94 34.0
FAN14G3510 Fragaria x ananassa HOM05D000307 ORTHO05D000166 4.8e-08 61.2 94 34.0
Lalb_Chr02g0148031 Lupinus albus HOM05D000307 ORTHO05D000166 4.8e-08 61.2 94 36.2
Manes.08G107300 Manihot esculenta HOM05D000307 ORTHO05D000166 4.8e-08 61.2 104 32.7
TPR.G17576 Trifolium pratense HOM05D000307 ORTHO05D000166 4.8e-08 61.2 94 31.9
arahy.Tifrunner.gnm1.ann1.TW1RKA Arachis hypogaea HOM05D000307 ORTHO05D000166 6.2e-08 60.8 91 36.3
FAN03G1227 Fragaria x ananassa HOM05D000307 ORTHO05D000166 6.2e-08 60.8 98 34.7
Nn4g25289 Nelumbo nucifera HOM05D000307 ORTHO05D000166 6.2e-08 60.8 94 35.1
Psat5g149040 Pisum sativum HOM05D000307 ORTHO05D000166 6.2e-08 60.8 98 31.6
RcHm_v2.0_Chr1g0321431 Rosa chinensis HOM05D000307 ORTHO05D000166 6.2e-08 60.8 98 32.7
Ciclev10006519m.g Citrus clementina HOM05D000307 ORTHO05D000166 8.1e-08 60.5 104 32.7
Ciclev10013728m.g Citrus clementina HOM05D000307 ORTHO05D000166 8.1e-08 60.5 104 32.7
FAN10G1263 Fragaria x ananassa HOM05D000307 ORTHO05D000166 8.1e-08 60.5 97 35.1
MD15G1387300 Malus domestica HOM05D000307 ORTHO05D000166 8.1e-08 60.5 104 33.7
SpUn0302_0010 Schrenkiella parvula HOM05D000307 ORTHO05D000166 8.1e-08 60.5 91 38.5
TWI39G0513 Tripterygium wilfordii HOM05D000307 ORTHO05D000166 8.1e-08 60.5 104 32.7
Cpa.g.c33457.2 Carica papaya HOM05D000307 ORTHO05D000166 1.1e-07 60.1 96 34.4
Cpa.g.sc265.1 Carica papaya HOM05D000307 ORTHO05D000166 1.1e-07 60.1 94 35.1
Duzib177G1026 Durio zibethinus HOM05D000307 ORTHO05D000166 1.1e-07 60.1 104 32.7
TWI38G0721 Tripterygium wilfordii HOM05D000307 ORTHO05D000166 1.1e-07 60.1 104 32.7
TWI75G1381 Tripterygium wilfordii HOM05D000307 ORTHO05D000166 1.1e-07 60.1 94 33.0
TAR636G2648 Trochodendron aralioides HOM05D000307 ORTHO05D000166 1.1e-07 60.1 94 35.1
BcaC04g21253 Brassica carinata HOM05D000307 ORTHO05D000166 1.4e-07 59.7 94 37.2
A09p26700 Brassica napus HOM05D000307 ORTHO05D000166 1.4e-07 59.7 94 37.2
C09p33810 Brassica napus HOM05D000307 ORTHO05D000166 1.4e-07 59.7 94 37.2
BolC9t56218H Brassica oleracea HOM05D000307 ORTHO05D000166 1.4e-07 59.7 94 37.2
BraA09t38241Z Brassica rapa HOM05D000307 ORTHO05D000166 1.4e-07 59.7 94 37.2
Cpa.g.sc1750.2 Carica papaya HOM05D000307 ORTHO05D000166 1.4e-07 59.7 94 34.0
ClCG03G017900 Citrullus lanatus HOM05D000307 ORTHO05D000166 1.4e-07 59.7 94 34.0
Psat5g119400 Pisum sativum HOM05D000307 ORTHO05D000166 1.4e-07 59.7 95 34.7
RcHm_v2.0_Chr3g0458611 Rosa chinensis HOM05D000307 ORTHO05D000166 1.4e-07 59.7 98 31.6
CANSAT35G0001 Cannabis sativa HOM05D000307 ORTHO05D000166 1.8e-07 59.3 94 35.1
CANSAT80G1707 Cannabis sativa HOM05D000307 ORTHO05D000166 1.8e-07 59.3 94 37.2
Lalb_Chr18g0053561 Lupinus albus HOM05D000307 ORTHO05D000166 1.8e-07 59.3 103 34.0
Oeu009929.1 Olea europaea HOM05D000307 ORTHO05D000166 1.8e-07 59.3 94 34.0
Potri.013G018100 Populus trichocarpa HOM05D000307 ORTHO05D000166 1.8e-07 59.3 94 35.1
Sabra13G0020900 Salix brachista HOM05D000307 ORTHO05D000166 1.8e-07 59.3 94 34.0
CiPaw.14G012200 Carya illinoinensis HOM05D000307 ORTHO05D000166 2.4e-07 58.9 100 33.0
MELO3C015239.2 Cucumis melo HOM05D000307 ORTHO05D000166 2.4e-07 58.9 94 33.0
CsaV3_1G038060 Cucumis sativus L. HOM05D000307 ORTHO05D000166 2.4e-07 58.9 94 33.0
Dinv24518 Davidia involucrata HOM05D000307 ORTHO05D000166 2.4e-07 58.9 104 32.7
Gohir.A08G252000 Gossypium hirsutum HOM05D000307 ORTHO05D000166 2.4e-07 58.9 104 33.7
Gohir.D08G273600 Gossypium hirsutum HOM05D000307 ORTHO05D000166 2.4e-07 58.9 104 33.7
Gorai.004G292000 Gossypium raimondii HOM05D000307 ORTHO05D000166 2.4e-07 58.9 104 33.7
Psat5g149000 Pisum sativum HOM05D000307 ORTHO05D000166 2.4e-07 58.9 94 34.0
Manes.09G181500 Manihot esculenta HOM05D000307 ORTHO05D000166 3.1e-07 58.5 104 33.7
CANSAT80G0925 Cannabis sativa HOM05D000307 ORTHO05D000166 4.0e-07 58.2 94 36.2
Ca_15048_v3 Cicer arietinum L. HOM05D000307 ORTHO05D000166 4.0e-07 58.2 103 34.0
ECA246G5209 Erigeron canadensis HOM05D000307 ORTHO05D000166 4.0e-07 58.2 94 33.0
Lj5P318T22 Lonicera japonica HOM05D000307 ORTHO05D000166 4.0e-07 58.2 94 33.0
Solyc01g102260.3 Solanum lycopersicum HOM05D000307 ORTHO05D000166 4.0e-07 58.2 94 33.0
Sopen01g044720 Solanum pennellii HOM05D000307 ORTHO05D000166 4.0e-07 58.2 94 33.0
FAN09G0930 Fragaria x ananassa HOM05D000307 ORTHO05D000166 5.3e-07 57.8 94 33.0
Lalb_Chr18g0054231 Lupinus albus HOM05D000307 ORTHO05D000166 5.3e-07 57.8 94 35.1
Thecc.05G329900 Theobroma cacao HOM05D000307 ORTHO05D000166 5.3e-07 57.8 104 35.6
TAR636G1525 Trochodendron aralioides HOM05D000307 ORTHO05D000166 5.3e-07 57.8 94 34.0
BcaB01g01762 Brassica carinata HOM05D000307 ORTHO05D000166 6.9e-07 57.4 94 36.2
Cpa.g.c38760 Carica papaya HOM05D000307 ORTHO05D000166 6.9e-07 57.4 94 34.0
Cpa.g.sc1153.1 Carica papaya HOM05D000307 ORTHO05D000166 6.9e-07 57.4 95 33.7
Cpa.g.sc30.164 Carica papaya HOM05D000307 ORTHO05D000166 6.9e-07 57.4 94 34.0
Cc02_g35890 Coffea canephora HOM05D000307 ORTHO05D000166 6.9e-07 57.4 104 30.8
Cc11_g05560 Coffea canephora HOM05D000307 ORTHO05D000166 6.9e-07 57.4 104 31.7
MD08G1200100 Malus domestica HOM05D000307 ORTHO05D000166 6.9e-07 57.4 104 32.7
Oeu041404.1 Olea europaea HOM05D000307 ORTHO05D000166 6.9e-07 57.4 94 33.0
Prupe.6G304100 Prunus persica HOM05D000307 ORTHO05D000166 6.9e-07 57.4 94 33.0
arahy.Tifrunner.gnm1.ann1.R7WY1F Arachis hypogaea HOM05D000307 ORTHO05D000166 9.0e-07 57.0 98 35.7
ClCG01G010290 Citrullus lanatus HOM05D000307 ORTHO05D000166 9.0e-07 57.0 94 30.9
Dinv43556 Davidia involucrata HOM05D000307 ORTHO05D000166 9.0e-07 57.0 103 32.0
Thecc.05G229500 Theobroma cacao HOM05D000307 ORTHO05D000166 9.0e-07 57.0 104 33.7
CARHR102130 Cardamine hirsuta HOM05D000307 ORTHO05D000166 1.2e-06 56.6 94 35.1
CARHR119080 Cardamine hirsuta HOM05D000307 ORTHO05D000166 1.2e-06 56.6 94 36.2
Haze_02940 Corylus avellana HOM05D000307 ORTHO05D000166 1.2e-06 56.6 98 32.7
FAN02G0711 Fragaria x ananassa HOM05D000307 ORTHO05D000166 1.2e-06 56.6 98 32.7
FAN05G0631 Fragaria x ananassa HOM05D000307 ORTHO05D000166 1.2e-06 56.6 98 33.7
Actinidia17736 Actinidia chinensis HOM05D000307 ORTHO05D000166 1.5e-06 56.2 104 30.8
AT5G48670 Arabidopsis thaliana HOM05D000307 ORTHO05D000166 1.5e-06 56.2 94 35.1
arahy.Tifrunner.gnm1.ann1.E3QK4T Arachis hypogaea HOM05D000307 ORTHO05D000166 1.5e-06 56.2 98 34.7
RcHm_v2.0_Chr1g0346681 Rosa chinensis HOM05D000307 ORTHO05D000166 1.5e-06 56.2 91 35.2
SGA_v2.0_scaffold5G03073 Striga asiatica HOM05D000307 ORTHO05D000166 1.5e-06 56.2 98 31.6
Eucgr.E01737 Eucalyptus grandis HOM05D000307 ORTHO05D000166 2.0e-06 55.8 94 31.9
Medtr8g036130 Medicago truncatula HOM05D000307 ORTHO05D000166 2.0e-06 55.8 96 33.3
QL03p011032 Quercus lobata HOM05D000307 ORTHO05D000166 2.0e-06 55.8 104 31.7
Rhsim11G0105500 Rhododendron simsii HOM05D000307 ORTHO05D000166 2.0e-06 55.8 94 30.9
A02p25430 Brassica napus HOM05D000307 ORTHO05D000166 2.6e-06 55.5 94 34.0
Gorai.004G229700 Gossypium raimondii HOM05D000307 ORTHO05D000166 2.6e-06 55.5 93 32.3
Hma1.2p1_0759F.1_g213890 Hydrangea macrophylla HOM05D000307 ORTHO05D000166 2.6e-06 55.5 94 29.8
Hma1.2p1_1871F.1_g306090 Hydrangea macrophylla HOM05D000307 ORTHO05D000166 2.6e-06 55.5 94 29.8
Oeu009933.1 Olea europaea HOM05D000307 ORTHO05D000166 2.6e-06 55.5 94 31.9
Carub.0003s0523 Capsella rubella HOM05D000307 ORTHO05D000166 3.4e-06 55.1 94 35.1
CARHR101660 Cardamine hirsuta HOM05D000307 ORTHO05D000166 3.4e-06 55.1 94 34.0
CARHR180810 Cardamine hirsuta HOM05D000307 ORTHO05D000166 3.4e-06 55.1 94 35.1
Cpa.g.c40499.2 Carica papaya HOM05D000307 ORTHO05D000166 3.4e-06 55.1 94 33.0
Hma1.2p1_0419F.1_g149370 Hydrangea macrophylla HOM05D000307 ORTHO05D000166 3.4e-06 55.1 94 29.8
Oeu020889.1 Olea europaea HOM05D000307 ORTHO05D000166 3.4e-06 55.1 94 31.9
QL03p011092 Quercus lobata HOM05D000307 ORTHO05D000166 3.4e-06 55.1 104 31.7
Sp3g04750 Schrenkiella parvula HOM05D000307 ORTHO05D000166 3.4e-06 55.1 94 34.0
TWI12G0834 Tripterygium wilfordii HOM05D000307 ORTHO05D000166 3.4e-06 55.1 94 30.9
Cpa.g.sc139.40 Carica papaya HOM05D000307 ORTHO05D000166 4.4e-06 54.7 90 34.4
CiPaw.14G012100 Carya illinoinensis HOM05D000307 ORTHO05D000166 4.4e-06 54.7 103 31.1
CDE05G1214 Ceratophyllum demersum HOM05D000307 ORTHO05D000166 4.4e-06 54.7 94 34.0
Lalb_Chr15g0085891 Lupinus albus HOM05D000307 ORTHO05D000166 4.4e-06 54.7 94 34.0
Rhsim07G0050300 Rhododendron simsii HOM05D000307 ORTHO05D000166 4.4e-06 54.7 104 33.7
Sed0022320 Sechium edule HOM05D000307 ORTHO05D000166 4.4e-06 54.7 94 30.9
CARHR102230 Cardamine hirsuta HOM05D000307 ORTHO05D000166 5.8e-06 54.3 92 34.8
Thhalv10019579m.g Eutrema salsugineum HOM05D000307 ORTHO05D000166 5.8e-06 54.3 94 34.0
Gohir.D08G215933 Gossypium hirsutum HOM05D000307 ORTHO05D000166 5.8e-06 54.3 93 32.3
Gohir.D08G215966 Gossypium hirsutum HOM05D000307 ORTHO05D000166 5.8e-06 54.3 93 32.3
HanXRQChr15g0479291 Helianthus annuus HOM05D000307 ORTHO05D000166 5.8e-06 54.3 94 30.9
HanXRQChr15g0479321 Helianthus annuus HOM05D000307 ORTHO05D000166 5.8e-06 54.3 94 30.9
Lalb_Chr21g0310481 Lupinus albus HOM05D000307 ORTHO05D000166 5.8e-06 54.3 94 33.0
SHI07325 Sapria himalayana HOM05D000307 ORTHO05D000166 5.8e-06 54.3 104 32.7
Aqoxy5G02851 Aquilegia oxysepala HOM05D000307 ORTHO05D000166 7.6e-06 53.9 95 32.6
arahy.Tifrunner.gnm1.ann1.137JBW Arachis hypogaea HOM05D000307 ORTHO05D000166 7.6e-06 53.9 98 33.7
CiPaw.13G019300 Carya illinoinensis HOM05D000307 ORTHO05D000166 7.6e-06 53.9 98 30.6
SalBow5G4029 Salvia bowleyana HOM05D000307 ORTHO05D000166 7.6e-06 53.9 95 32.6
Sp6g04880 Schrenkiella parvula HOM05D000307 ORTHO05D000166 7.6e-06 53.9 94 33.0
Thecc.05G229400 Theobroma cacao HOM05D000307 ORTHO05D000166 7.6e-06 53.9 104 32.7
arahy.Tifrunner.gnm1.ann1.V1US3H Arachis hypogaea HOM05D000307 ORTHO05D000166 9.9e-06 53.5 98 33.7
Cpa.g.sc185.11 Carica papaya HOM05D000307 ORTHO05D000166 9.9e-06 53.5 87 33.3
Cfa010997 Carpinus fangiana HOM05D000307 ORTHO05D000166 9.9e-06 53.5 98 32.7
Thhalv10002346m.g Eutrema salsugineum HOM05D000307 ORTHO05D000166 9.9e-06 53.5 94 34.0
FvH4_6g43410 Fragaria vesca HOM05D000307 ORTHO05D000166 9.9e-06 53.5 98 30.6
HanXRQChr02g0058811 Helianthus annuus HOM05D000307 ORTHO05D000166 9.9e-06 53.5 104 29.8
HanXRQChr10g0296351 Helianthus annuus HOM05D000307 ORTHO05D000166 9.9e-06 53.5 104 29.8
HanXRQChr10g0296361 Helianthus annuus HOM05D000307 ORTHO05D000166 9.9e-06 53.5 104 29.8
Sabra13G0001200 Salix brachista HOM05D000307 ORTHO05D000166 9.9e-06 53.5 94 31.9


User provided reference genes

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