Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc26.6 Carica papaya HOM05D006709 ORTHO05D008329 4.4e-49 197.6 97 100.0
Manes.18G001600 Manihot esculenta HOM05D006709 ORTHO05D008329 5.2e-42 174.1 97 84.5
Prupe.1G298300 Prunus persica HOM05D006709 ORTHO05D008329 6.9e-42 173.7 97 84.5
Dinv05492 Davidia involucrata HOM05D006709 ORTHO05D008329 2.0e-41 172.2 98 88.8
Actinidia17082 Actinidia chinensis HOM05D006709 ORTHO05D008329 7.6e-41 170.2 98 85.7
ClCG07G009870 Citrullus lanatus HOM05D006709 ORTHO05D008329 9.9e-41 169.9 97 83.5
Ciclev10002952m.g Citrus clementina HOM05D006709 ORTHO05D008329 9.9e-41 169.9 97 83.5
Actinidia15528 Actinidia chinensis HOM05D006709 ORTHO05D008329 1.3e-40 169.5 98 85.7
Potri.005G257100 Populus trichocarpa HOM05D006709 ORTHO05D008329 1.7e-40 169.1 97 80.4
vmacro21761 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 1.7e-40 169.1 95 86.3
GSVIVG01013436001 Vitis vinifera HOM05D006709 ORTHO05D008329 1.7e-40 169.1 98 85.7
MELO3C016084.2 Cucumis melo HOM05D006709 ORTHO05D008329 2.9e-40 168.3 94 85.1
RcHm_v2.0_Chr7g0216881 Rosa chinensis HOM05D006709 ORTHO05D008329 6.4e-40 167.2 101 82.2
CSS0027441 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 1.1e-39 166.4 94 86.2
QL02p015873 Quercus lobata HOM05D006709 ORTHO05D008329 1.1e-39 166.4 98 82.7
CSS0014821 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 1.9e-39 165.6 94 86.2
Sed0015665 Sechium edule HOM05D006709 ORTHO05D008329 2.4e-39 165.2 94 83.0
Thecc.08G099000 Theobroma cacao HOM05D006709 ORTHO05D008329 3.2e-39 164.9 96 81.2
PGR031G3816 Punica granatum HOM05D006709 ORTHO05D008329 4.2e-39 164.5 98 81.6
Aa31LG9G13520 Aethionema arabicum HOM05D006709 ORTHO05D008329 5.4e-39 164.1 97 78.4
FvH4_5g26200 Fragaria vesca HOM05D006709 ORTHO05D008329 5.4e-39 164.1 101 78.2
FAN08G1650 Fragaria x ananassa HOM05D006709 ORTHO05D008329 5.4e-39 164.1 101 78.2
FAN13G1766 Fragaria x ananassa HOM05D006709 ORTHO05D008329 5.4e-39 164.1 101 78.2
AL4G29260 Arabidopsis lyrata HOM05D006709 ORTHO05D008329 1.2e-38 162.9 97 80.4
Gohir.A09G212700 Gossypium hirsutum HOM05D006709 ORTHO05D008329 1.2e-38 162.9 93 81.7
Gohir.D09G206300 Gossypium hirsutum HOM05D006709 ORTHO05D008329 1.2e-38 162.9 93 81.7
Gorai.006G230200 Gossypium raimondii HOM05D006709 ORTHO05D008329 1.2e-38 162.9 93 81.7
TWI56G0059 Tripterygium wilfordii HOM05D006709 ORTHO05D008329 1.6e-38 162.5 99 82.8
Carub.0004s1522 Capsella rubella HOM05D006709 ORTHO05D008329 2.7e-38 161.8 98 80.6
Atru.chr13.44 Acer truncatum HOM05D006709 ORTHO05D008329 4.6e-38 161.0 93 81.7
arahy.Tifrunner.gnm1.ann1.6A59KD Arachis hypogaea HOM05D006709 ORTHO05D008329 4.6e-38 161.0 95 82.1
FAN18G1826 Fragaria x ananassa HOM05D006709 ORTHO05D008329 4.6e-38 161.0 101 77.2
MD06G1003100 Malus domestica HOM05D006709 ORTHO05D008329 4.6e-38 161.0 94 80.9
Oeu035869.2 Olea europaea HOM05D006709 ORTHO05D008329 4.6e-38 161.0 99 80.8
arahy.Tifrunner.gnm1.ann1.ZQQY3F Arachis hypogaea HOM05D006709 ORTHO05D008329 1.7e-37 159.1 95 81.1
Duzib151G1059 Durio zibethinus HOM05D006709 ORTHO05D008329 2.3e-37 158.7 93 81.7
CARHR127610 Cardamine hirsuta HOM05D006709 ORTHO05D008329 3.0e-37 158.3 97 76.3
Haze_22867 Corylus avellana HOM05D006709 ORTHO05D008329 3.0e-37 158.3 96 78.1
Duzib212G0839 Durio zibethinus HOM05D006709 ORTHO05D008329 3.0e-37 158.3 96 77.1
Thhalv10017474m.g Eutrema salsugineum HOM05D006709 ORTHO05D008329 5.1e-37 157.5 97 75.3
BcaB01g03928 Brassica carinata HOM05D006709 ORTHO05D008329 1.5e-36 156.0 97 75.3
CAN.G1330.15 Capsicum annuum HOM05D006709 ORTHO05D008329 1.5e-36 156.0 98 78.6
Eucgr.F03607 Eucalyptus grandis HOM05D006709 ORTHO05D008329 1.5e-36 156.0 97 75.3
Glyma.04G014200 Glycine max HOM05D006709 ORTHO05D008329 1.5e-36 156.0 98 78.6
Lj4A4T20 Lonicera japonica HOM05D006709 ORTHO05D008329 1.5e-36 156.0 95 81.1
Nitab4.5_0007096g0020 Nicotiana tabacum HOM05D006709 ORTHO05D008329 1.5e-36 156.0 98 78.6
Psat5g008400 Pisum sativum HOM05D006709 ORTHO05D008329 1.9e-36 155.6 92 78.3
AT2G33585 Arabidopsis thaliana HOM05D006709 ORTHO05D008329 2.5e-36 155.2 97 77.3
Lalb_Chr03g0035821 Lupinus albus HOM05D006709 ORTHO05D008329 2.5e-36 155.2 95 76.8
CANSAT78G0412 Cannabis sativa HOM05D006709 ORTHO05D008329 4.3e-36 154.5 96 74.0
BcaC01g05832 Brassica carinata HOM05D006709 ORTHO05D008329 7.3e-36 153.7 97 74.2
C03p21970 Brassica napus HOM05D006709 ORTHO05D008329 7.3e-36 153.7 97 74.2
BolC3t14580H Brassica oleracea HOM05D006709 ORTHO05D008329 7.3e-36 153.7 97 74.2
BraA03t11140Z Brassica rapa HOM05D006709 ORTHO05D008329 7.3e-36 153.7 97 74.2
MBI04_g31214_MAGBIO Magnolia biondii HOM05D006709 ORTHO05D008329 7.3e-36 153.7 98 74.5
Solyc04g082800.3 Solanum lycopersicum HOM05D006709 ORTHO05D008329 9.6e-36 153.3 98 75.5
Sopen04g036440 Solanum pennellii HOM05D006709 ORTHO05D008329 9.6e-36 153.3 98 75.5
Phvul.009G008700 Phaseolus vulgaris HOM05D006709 ORTHO05D008329 1.3e-35 152.9 91 81.3
Rhsim06G0002600 Rhododendron simsii HOM05D006709 ORTHO05D008329 1.3e-35 152.9 101 74.3
A03p18800 Brassica napus HOM05D006709 ORTHO05D008329 1.6e-35 152.5 97 73.2
PSO017G0586 Papaver somniferum HOM05D006709 ORTHO05D008329 1.6e-35 152.5 98 77.6
Hma1.2p1_0489F.1_g164140 Hydrangea macrophylla HOM05D006709 ORTHO05D008329 3.6e-35 151.4 95 76.8
EL10Ac1g01866 Beta vulgaris HOM05D006709 ORTHO05D008329 4.8e-35 151.0 98 75.5
ECA233G3448 Erigeron canadensis HOM05D006709 ORTHO05D008329 8.1e-35 150.2 94 78.7
VMungo1309G2593 Vigna mungo HOM05D006709 ORTHO05D008329 8.1e-35 150.2 99 75.8
C04p63090 Brassica napus HOM05D006709 ORTHO05D008329 1.1e-34 149.8 98 73.5
BolC4t27784H Brassica oleracea HOM05D006709 ORTHO05D008329 1.1e-34 149.8 98 73.5
Lalb_Chr04g0257801 Lupinus albus HOM05D006709 ORTHO05D008329 1.1e-34 149.8 95 74.7
Hund05070 Selenicereus undatus HOM05D006709 ORTHO05D008329 1.1e-34 149.8 91 78.0
Ah.11g042070 Amaranthus hybridus HOM05D006709 ORTHO05D008329 1.4e-34 149.4 98 72.4
Lj1g0007500 Lotus japonicus HOM05D006709 ORTHO05D008329 1.8e-34 149.1 89 82.0
Medtr3g116150 Medicago truncatula HOM05D006709 ORTHO05D008329 1.8e-34 149.1 94 74.5
Peaxi162Scf00385g00310 Petunia axillaris HOM05D006709 ORTHO05D008329 1.8e-34 149.1 98 75.5
ATR0605G117 Amborella trichopoda HOM05D006709 ORTHO05D008329 3.1e-34 148.3 94 77.7
BcaC02g07804 Brassica carinata HOM05D006709 ORTHO05D008329 3.1e-34 148.3 98 72.4
SalBow7G4607 Salvia bowleyana HOM05D006709 ORTHO05D008329 3.1e-34 148.3 89 82.0
HanXRQChr12g0367591 Helianthus annuus HOM05D006709 ORTHO05D008329 5.3e-34 147.5 97 73.2
Cc10_g00210 Coffea canephora HOM05D006709 ORTHO05D008329 9.0e-34 146.7 96 77.1
PGSC0003DMG400009925 Solanum tuberosum HOM05D006709 ORTHO05D008329 1.2e-33 146.4 94 75.5
TPR.G38103 Trifolium pratense HOM05D006709 ORTHO05D008329 1.2e-33 146.4 93 75.3
Ca_15382_v3 Cicer arietinum L. HOM05D006709 ORTHO05D008329 1.5e-33 146.0 91 74.7
Lsat_1_v5_gn_9_48241 Lactuca sativa HOM05D006709 ORTHO05D008329 1.5e-33 146.0 91 78.0
Migut.C00352 Erythranthe guttata HOM05D006709 ORTHO05D008329 2.0e-33 145.6 90 75.6
Sc15g0004050 Simmondsia chinensis HOM05D006709 ORTHO05D008329 3.4e-33 144.8 93 73.1
BcaB06g28702 Brassica carinata HOM05D006709 ORTHO05D008329 4.5e-33 144.4 98 71.4
Oeu035760.1 Olea europaea HOM05D006709 ORTHO05D008329 5.8e-33 144.1 104 72.1
unitig_37.g13048 Utricularia gibba HOM05D006709 ORTHO05D008329 5.8e-33 144.1 91 74.7
COL.COLO4_12285 Corchorus olitorius HOM05D006709 ORTHO05D008329 7.6e-33 143.7 88 76.1
Lsat_1_v5_gn_8_26041 Lactuca sativa HOM05D006709 ORTHO05D008329 7.6e-33 143.7 98 75.5
A04p25850 Brassica napus HOM05D006709 ORTHO05D008329 9.9e-33 143.3 98 71.4
BraA04t18087Z Brassica rapa HOM05D006709 ORTHO05D008329 9.9e-33 143.3 98 71.4
Nn5g31057 Nelumbo nucifera HOM05D006709 ORTHO05D008329 9.9e-33 143.3 121 64.5
Os08g0512900 Oryza sativa ssp. japonica HOM05D006709 ORTHO05D008329 9.9e-33 143.3 92 73.9
Sabra05G0199000 Salix brachista HOM05D006709 ORTHO05D008329 8.4e-32 140.2 79 79.7
CDE05G2376 Ceratophyllum demersum HOM05D006709 ORTHO05D008329 1.4e-31 139.4 94 72.3
TAR628G1717 Trochodendron aralioides HOM05D006709 ORTHO05D008329 3.2e-31 138.3 80 86.2
HPP92_015749 Vanilla planifolia HOM05D006709 ORTHO05D008329 2.1e-30 135.6 88 72.7
Glyma.06G014200 Glycine max HOM05D006709 ORTHO05D008329 7.9e-30 133.7 99 68.7
Aqoxy5G00959 Aquilegia oxysepala HOM05D006709 ORTHO05D008329 2.3e-29 132.1 79 77.2
Sp4g15940 Schrenkiella parvula HOM05D006709 ORTHO05D008329 3.0e-29 131.7 83 72.3
SEGI_16420 Sequoiadendron giganteum HOM05D006709 ORTHO05D008329 5.1e-29 131.0 92 66.3
CiPaw.07G132800 Carya illinoinensis HOM05D006709 ORTHO05D008329 4.3e-28 127.9 78 78.2
Zm00001eb199960 Zea mays HOM05D006709 ORTHO05D008329 9.6e-28 126.7 79 75.9
CsaV3_4G008460 Cucumis sativus L. HOM05D006709 ORTHO05D008329 2.0e-25 119.0 62 88.7
BcaC01g05833 Brassica carinata HOM05D006709 ORTHO05D008329 7.6e-25 117.1 89 66.3
FAN04G1417 Fragaria x ananassa HOM05D006709 ORTHO05D008329 7.6e-25 117.1 94 66.0
MSTRG.1007 Avicennia marina HOM05D006709 ORTHO05D008329 3.8e-24 114.8 81 67.9
AagrBONN_evm.TU.Sc2ySwM_344.3753 Anthoceros agrestis HOM05D006709 ORTHO05D008329 3.3e-20 101.7 93 57.0
Mapoly0015s0105 Marchantia polymorpha HOM05D006709 ORTHO05D008329 7.4e-20 100.5 97 54.6
Manes.05G128900 Manihot esculenta HOM05D006709 ORTHO05D008329 9.6e-20 100.1 71 66.2
DCAR_016802 Daucus carota HOM05D006709 ORTHO05D008329 2.4e-18 95.5 95 51.6
vmacro04272 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 4.9e-16 87.8 106 48.1
Pp3c1_9780 Physcomitrium patens HOM05D006709 ORTHO05D008329 2.5e-15 85.5 86 54.7
SHI07946 Sapria himalayana HOM05D006709 ORTHO05D008329 6.7e-13 77.4 44 77.3
SalBow1G7713 Salvia bowleyana HOM05D006709 ORTHO05D008329 2.8e-11 72.0 44 72.7
SalBow8G3647 Salvia bowleyana HOM05D006709 ORTHO05D008329 2.6e-09 65.5 38 73.7
DCAR_023021 Daucus carota HOM05D006709 ORTHO05D008329 1.0e-08 63.5 63 50.8
CBR_g27877 Chara braunii HOM05D006709 ORTHO05D008329 1.3e-08 63.2 53 54.7
AUR62035175 Chenopodium quinoa HOM05D006709 ORTHO05D008329 3.2e-07 58.5 37 67.6


User provided reference genes

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