Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc26.51 Carica papaya HOM05D006392 ORTHO05D008010 2.5e-225 785.0 380 100.0
Thecc.08G045200 Theobroma cacao HOM05D006392 ORTHO05D008010 4.6e-174 614.8 377 76.1
Duzib093G0848 Durio zibethinus HOM05D006392 ORTHO05D008010 7.8e-174 614.0 377 77.2
TWI56G0581 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 3.9e-173 611.7 381 76.1
Gohir.A01G111000 Gossypium hirsutum HOM05D006392 ORTHO05D008010 5.8e-169 597.8 376 75.0
Gorai.002G123300 Gossypium raimondii HOM05D006392 ORTHO05D008010 2.2e-168 595.9 376 74.7
Gohir.D01G097700 Gossypium hirsutum HOM05D006392 ORTHO05D008010 4.9e-168 594.7 376 74.7
Potri.002G021700 Populus trichocarpa HOM05D006392 ORTHO05D008010 6.2e-163 577.8 381 71.7
THA.LOC104809190 Tarenaya hassleriana HOM05D006392 ORTHO05D008010 1.4e-162 576.6 377 73.7
Ciclev10001496m.g Citrus clementina HOM05D006392 ORTHO05D008010 3.1e-162 575.5 376 73.1
Eucgr.F01664 Eucalyptus grandis HOM05D006392 ORTHO05D008010 3.1e-162 575.5 376 71.0
Potri.005G240000 Populus trichocarpa HOM05D006392 ORTHO05D008010 4.4e-161 571.6 381 70.9
AL8G18870 Arabidopsis lyrata HOM05D006392 ORTHO05D008010 5.8e-161 571.2 382 70.2
Sabra05G0185500 Salix brachista HOM05D006392 ORTHO05D008010 1.3e-160 570.1 376 71.0
QL02p011683 Quercus lobata HOM05D006392 ORTHO05D008010 4.9e-160 568.2 380 70.0
Prupe.1G364700 Prunus persica HOM05D006392 ORTHO05D008010 8.3e-160 567.4 381 70.3
GSVIVG01009916001 Vitis vinifera HOM05D006392 ORTHO05D008010 5.4e-159 564.7 376 71.0
Sp7g07860 Schrenkiella parvula HOM05D006392 ORTHO05D008010 6.0e-158 561.2 378 68.5
Manes.05G146900 Manihot esculenta HOM05D006392 ORTHO05D008010 1.3e-157 560.1 381 69.8
AT5G42470 Arabidopsis thaliana HOM05D006392 ORTHO05D008010 3.9e-157 558.5 383 68.4
A06p48320 Brassica napus HOM05D006392 ORTHO05D008010 1.5e-156 556.6 382 69.6
BcaC06g31757 Brassica carinata HOM05D006392 ORTHO05D008010 5.6e-156 554.7 382 69.1
BraA06t27702Z Brassica rapa HOM05D006392 ORTHO05D008010 9.5e-156 553.9 382 69.4
Haze_22639 Corylus avellana HOM05D006392 ORTHO05D008010 1.2e-155 553.5 428 63.8
PGR083G2660 Punica granatum HOM05D006392 ORTHO05D008010 2.1e-155 552.7 375 68.0
CiPaw.07G149200 Carya illinoinensis HOM05D006392 ORTHO05D008010 1.4e-154 550.1 383 67.6
Carub.0008s0658 Capsella rubella HOM05D006392 ORTHO05D008010 4.0e-154 548.5 384 67.7
CsaV3_3G045910 Cucumis sativus L. HOM05D006392 ORTHO05D008010 1.2e-153 547.0 376 65.7
TWI36G0533 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 4.4e-153 545.0 360 71.7
BcaC02g10765 Brassica carinata HOM05D006392 ORTHO05D008010 7.6e-153 544.3 384 68.8
Hma1.2p1_0638F.1_g193900 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 2.9e-152 542.3 376 68.6
C04p25370 Brassica napus HOM05D006392 ORTHO05D008010 1.9e-151 539.7 385 68.6
BolC4t24044H Brassica oleracea HOM05D006392 ORTHO05D008010 1.9e-151 539.7 385 68.6
Thhalv10003229m.g Eutrema salsugineum HOM05D006392 ORTHO05D008010 1.9e-151 539.7 378 65.9
Glyma.09G103100 Glycine max HOM05D006392 ORTHO05D008010 1.9e-151 539.7 372 69.4
Sabra02G0018100 Salix brachista HOM05D006392 ORTHO05D008010 1.9e-151 539.7 408 64.0
MD15G1011700 Malus domestica HOM05D006392 ORTHO05D008010 4.1e-151 538.5 375 67.7
Lj6g0002207 Lotus japonicus HOM05D006392 ORTHO05D008010 5.4e-151 538.1 372 69.4
Rhsim06G0021200 Rhododendron simsii HOM05D006392 ORTHO05D008010 5.4e-151 538.1 376 68.1
Sed0018359 Sechium edule HOM05D006392 ORTHO05D008010 2.1e-150 536.2 370 66.8
TAR628G0005 Trochodendron aralioides HOM05D006392 ORTHO05D008010 3.5e-150 535.4 377 66.6
Lalb_Chr20g0119891 Lupinus albus HOM05D006392 ORTHO05D008010 4.6e-150 535.0 372 66.7
MD08G1012700 Malus domestica HOM05D006392 ORTHO05D008010 1.0e-149 533.9 375 66.7
Cfa013957 Carpinus fangiana HOM05D006392 ORTHO05D008010 1.7e-149 533.1 382 68.1
CANSAT25G2040 Cannabis sativa HOM05D006392 ORTHO05D008010 2.3e-149 532.7 381 66.4
CSS0006206 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 2.5e-148 529.3 377 66.6
CSS0012189 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 2.5e-148 529.3 377 66.6
HanXRQChr13g0387101 Helianthus annuus HOM05D006392 ORTHO05D008010 1.6e-147 526.6 379 68.3
Aa31LG9G12590 Aethionema arabicum HOM05D006392 ORTHO05D008010 1.8e-146 523.1 352 71.3
Ca_00791_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 1.8e-146 523.1 372 66.4
Actinidia21265 Actinidia chinensis HOM05D006392 ORTHO05D008010 3.1e-146 522.3 377 66.3
Lj4C23T1 Lonicera japonica HOM05D006392 ORTHO05D008010 4.0e-146 521.9 396 64.1
MSTRG.1188 Avicennia marina HOM05D006392 ORTHO05D008010 9.0e-146 520.8 378 66.4
RcHm_v2.0_Chr6g0302911 Rosa chinensis HOM05D006392 ORTHO05D008010 9.0e-146 520.8 375 67.5
Medtr2g029040 Medicago truncatula HOM05D006392 ORTHO05D008010 1.2e-145 520.4 373 66.2
Phvul.005G022200 Phaseolus vulgaris HOM05D006392 ORTHO05D008010 1.5e-145 520.0 372 67.5
ECA233G3412 Erigeron canadensis HOM05D006392 ORTHO05D008010 2.0e-145 519.6 377 67.1
CAN.G311.35 Capsicum annuum HOM05D006392 ORTHO05D008010 4.4e-145 518.5 376 64.9
arahy.Tifrunner.gnm1.ann1.8AJY4P Arachis hypogaea HOM05D006392 ORTHO05D008010 1.3e-144 516.9 359 69.1
Ca_07152_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 3.8e-144 515.4 375 66.1
arahy.Tifrunner.gnm1.ann1.GAE5DS Arachis hypogaea HOM05D006392 ORTHO05D008010 6.4e-144 514.6 359 68.8
Duzib116G0836 Durio zibethinus HOM05D006392 ORTHO05D008010 4.2e-143 511.9 378 67.2
FvH4_2g38390 Fragaria vesca HOM05D006392 ORTHO05D008010 4.2e-143 511.9 375 65.6
Lsat_1_v5_gn_8_30701 Lactuca sativa HOM05D006392 ORTHO05D008010 1.3e-141 506.9 379 66.2
AUR62033899 Chenopodium quinoa HOM05D006392 ORTHO05D008010 3.9e-141 505.4 380 63.7
Solyc04g081500.3 Solanum lycopersicum HOM05D006392 ORTHO05D008010 5.1e-141 505.0 377 64.2
Oeu014179.1 Olea europaea HOM05D006392 ORTHO05D008010 1.1e-140 503.8 377 64.7
PGSC0003DMG400009939 Solanum tuberosum HOM05D006392 ORTHO05D008010 1.9e-140 503.1 377 63.7
PSO675G2043 Papaver somniferum HOM05D006392 ORTHO05D008010 2.5e-140 502.7 375 63.5
Sopen04g035110 Solanum pennellii HOM05D006392 ORTHO05D008010 3.3e-140 502.3 377 63.9
Migut.C00843 Erythranthe guttata HOM05D006392 ORTHO05D008010 5.6e-140 501.5 378 64.8
Aqoxy6G00284_Aqoxy6G00285 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 4.8e-139 498.4 370 63.0
VMungo1080G0965 Vigna mungo HOM05D006392 ORTHO05D008010 2.4e-138 496.1 350 67.4
PSO541G2958 Papaver somniferum HOM05D006392 ORTHO05D008010 4.0e-138 495.4 375 62.4
SalBow7G2189 Salvia bowleyana HOM05D006392 ORTHO05D008010 3.4e-137 492.3 390 62.1
ATR0810G120 Amborella trichopoda HOM05D006392 ORTHO05D008010 2.2e-136 489.6 375 60.5
DCAR_023015 Daucus carota HOM05D006392 ORTHO05D008010 4.9e-136 488.4 377 63.1
EL10Ac1g02188 Beta vulgaris HOM05D006392 ORTHO05D008010 3.5e-134 482.3 359 63.2
FAN20G2474 Fragaria x ananassa HOM05D006392 ORTHO05D008010 1.8e-130 469.9 375 61.9
FAN15G0959 Fragaria x ananassa HOM05D006392 ORTHO05D008010 6.9e-130 468.0 375 61.3
FAN27G1073 Fragaria x ananassa HOM05D006392 ORTHO05D008010 9.9e-129 464.2 375 61.1
Psat1g169520 Pisum sativum HOM05D006392 ORTHO05D008010 1.6e-126 456.8 325 67.4
Eucgr.F02661 Eucalyptus grandis HOM05D006392 ORTHO05D008010 1.1e-124 450.7 304 69.4
COL.COLO4_26140 Corchorus olitorius HOM05D006392 ORTHO05D008010 2.8e-123 446.0 288 75.3
Nitab4.5_0013390g0010 Nicotiana tabacum HOM05D006392 ORTHO05D008010 4.8e-123 445.3 377 56.8
AUR62041903 Chenopodium quinoa HOM05D006392 ORTHO05D008010 1.4e-122 443.7 380 58.4
Nn1g05904 Nelumbo nucifera HOM05D006392 ORTHO05D008010 5.8e-121 438.3 375 56.8
Os06g0715600 Oryza sativa ssp. japonica HOM05D006392 ORTHO05D008010 1.7e-120 436.8 370 56.2
SEGI_16132 Sequoiadendron giganteum HOM05D006392 ORTHO05D008010 1.7e-120 436.8 373 55.5
SGA_v2.0_scaffold11G05922 Striga asiatica HOM05D006392 ORTHO05D008010 3.8e-120 435.6 380 56.8
Hund05186 Selenicereus undatus HOM05D006392 ORTHO05D008010 2.5e-119 433.0 379 58.0
Hma1.2p1_0638F.1_g193910 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 4.2e-119 432.2 399 55.9
Dinv31849 Davidia involucrata HOM05D006392 ORTHO05D008010 5.5e-119 431.8 305 68.9
Sc02g0008600 Simmondsia chinensis HOM05D006392 ORTHO05D008010 9.3e-119 431.0 328 64.6
MBI05_g07507_MAGBIO Magnolia biondii HOM05D006392 ORTHO05D008010 8.7e-117 424.5 358 58.4
Zm00001eb228060 Zea mays HOM05D006392 ORTHO05D008010 1.6e-115 420.2 374 55.6
Peaxi162Scf00438g00835 Petunia axillaris HOM05D006392 ORTHO05D008010 2.2e-115 419.9 375 55.2
CDE04G0374 Ceratophyllum demersum HOM05D006392 ORTHO05D008010 6.3e-115 418.3 378 55.0
HPP92_024091 Vanilla planifolia HOM05D006392 ORTHO05D008010 9.0e-114 414.5 375 56.0
MD11G1014100 Malus domestica HOM05D006392 ORTHO05D008010 5.5e-111 405.2 276 69.6
TPR.G17497 Trifolium pratense HOM05D006392 ORTHO05D008010 1.8e-109 400.2 255 74.1
Actinidia35835 Actinidia chinensis HOM05D006392 ORTHO05D008010 2.5e-108 396.4 381 54.6
vmacro07583 Vaccinium macrocarpon HOM05D006392 ORTHO05D008010 1.9e-103 380.2 281 65.8
MELO3C030484.2 Cucumis melo HOM05D006392 ORTHO05D008010 5.1e-101 372.1 397 49.9
Atru.chr13.285 Acer truncatum HOM05D006392 ORTHO05D008010 1.1e-98 364.4 340 54.1
Actinidia16990 Actinidia chinensis HOM05D006392 ORTHO05D004187 4.7e-94 349.0 256 65.6
unitig_32.g11136 Utricularia gibba HOM05D006392 ORTHO05D008010 6.1e-94 348.6 287 59.6
Glyma.15G275100 Glycine max HOM05D006392 ORTHO05D008010 1.8e-93 347.1 221 73.3
AagrBONN_evm.TU.Sc2ySwM_117.3435 Anthoceros agrestis HOM05D006392 ORTHO05D008010 2.8e-91 339.7 365 48.8
Mapoly0064s0103 Marchantia polymorpha HOM05D006392 ORTHO05D008010 2.5e-87 326.6 377 44.3
CARHR181930 Cardamine hirsuta HOM05D006392 ORTHO05D008010 3.2e-87 326.2 218 69.7
SMO196G0156 Selaginella moellendorffii HOM05D006392 ORTHO05D008010 2.7e-86 323.2 376 43.6
Pp3c4_9730 Physcomitrium patens HOM05D006392 ORTHO05D008010 3.6e-86 322.8 379 45.4
Cc10_g01630 Coffea canephora HOM05D006392 ORTHO05D008010 1.6e-70 270.8 181 69.1
CBR_g23034 Chara braunii HOM05D006392 ORTHO05D008010 1.7e-67 260.8 391 35.0
Cc10_g01620 Coffea canephora HOM05D006392 ORTHO05D008010 2.6e-60 236.9 196 59.7
Aqoxy4G01015 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 6.8e-53 212.2 164 59.8
Ah.11g039750 Amaranthus hybridus HOM05D006392 ORTHO05D008010 3.5e-41 173.3 151 55.0
RcHm_v2.0_Chr4g0398161 Rosa chinensis HOM05D006392 ORTHO05D008010 1.9e-31 141.0 86 80.2
RcHm_v2.0_Chr4g0398171 Rosa chinensis HOM05D006392 ORTHO05D008010 7.3e-31 139.0 113 59.3
Actinidia27159 Actinidia chinensis HOM05D006392 ORTHO05D008010 1.5e-28 131.3 201 40.8
TPR.G29580 Trifolium pratense HOM05D006392 ORTHO05D008010 3.4e-28 130.2 117 53.8
Cre09.g401367 Chlamydomonas reinhardtii HOM05D006392 ORTHO05D008010 2.8e-14 84.0 138 37.7
ClCG05G018230 Citrullus lanatus HOM05D006392 ORTHO05D008010 1.4e-13 81.6 49 69.4
Zm00001eb340150 Zea mays HOM05D006392 ORTHO05D008010 4.0e-13 80.1 77 53.2


User provided reference genes

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