Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc26.305 Carica papaya HOM05D007731 ORTHO05D008483 8.3e-123 443.7 226 100.0
Duzib093G0569 Durio zibethinus HOM05D007731 ORTHO05D008483 1.1e-50 204.1 255 51.8
Thecc.08G047100 Theobroma cacao HOM05D007731 ORTHO05D008483 7.9e-49 198.0 256 51.6
Gohir.A05G185300 Gossypium hirsutum HOM05D007731 ORTHO05D008483 3.4e-44 182.6 256 50.8
Manes.18G011966 Manihot esculenta HOM05D007731 ORTHO05D008483 1.4e-42 177.2 250 51.6
Manes.05G145300 Manihot esculenta HOM05D007731 ORTHO05D008483 2.5e-42 176.4 248 48.4
Potri.002G019700 Populus trichocarpa HOM05D007731 ORTHO05D008483 2.3e-40 169.9 246 47.2
Sabra02G0016000 Salix brachista HOM05D007731 ORTHO05D008483 2.3e-40 169.9 246 47.6
Gohir.A01G110400 Gossypium hirsutum HOM05D007731 ORTHO05D008483 1.1e-39 167.5 250 48.4
Gorai.009G193400 Gossypium raimondii HOM05D007731 ORTHO05D008483 9.7e-39 164.5 255 48.6
TAR628G0423 Trochodendron aralioides HOM05D007731 ORTHO05D008483 8.2e-38 161.4 239 43.5
CSS0046256 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 1.2e-36 157.5 249 46.6
Gohir.D05G188100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 4.5e-36 155.6 255 47.5
QL02p012129 Quercus lobata HOM05D007731 ORTHO05D008483 4.5e-36 155.6 243 47.7
TAR376G0482 Trochodendron aralioides HOM05D007731 ORTHO05D008483 1.0e-35 154.5 234 44.0
CiPaw.07G147300 Carya illinoinensis HOM05D007731 ORTHO05D008483 1.3e-35 154.1 235 46.4
COL.COLO4_26124 Corchorus olitorius HOM05D007731 ORTHO05D008483 1.3e-35 154.1 259 44.0
Gohir.D01G097000 Gossypium hirsutum HOM05D007731 ORTHO05D008483 5.0e-35 152.1 250 45.6
Gorai.002G122700 Gossypium raimondii HOM05D007731 ORTHO05D008483 5.0e-35 152.1 250 45.6
Potri.005G241800 Populus trichocarpa HOM05D007731 ORTHO05D008483 5.0e-35 152.1 250 45.2
CSS0005102 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 2.5e-34 149.8 249 45.8
Haze_22661 Corylus avellana HOM05D007731 ORTHO05D008483 3.2e-34 149.4 239 41.4
TWI12G0892 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 7.2e-34 148.3 223 45.7
Hma1.2p1_0733F.1_g210180 Hydrangea macrophylla HOM05D007731 ORTHO05D008483 1.2e-33 147.5 238 43.7
Prupe.1G363100 Prunus persica HOM05D007731 ORTHO05D008483 1.2e-33 147.5 267 44.9
Cfa013976 Carpinus fangiana HOM05D007731 ORTHO05D008483 2.3e-32 143.3 237 40.9
Cc00_g29330 Coffea canephora HOM05D007731 ORTHO05D008483 2.3e-32 143.3 269 43.5
Actinidia16998 Actinidia chinensis HOM05D007731 ORTHO05D008483 5.1e-32 142.1 225 42.7
Ciclev10002425m.g Citrus clementina HOM05D007731 ORTHO05D008483 5.1e-32 142.1 236 44.5
Lj4P799T27 Lonicera japonica HOM05D007731 ORTHO05D008483 1.1e-31 141.0 288 40.6
CANSAT25G3722 Cannabis sativa HOM05D007731 ORTHO05D008483 2.6e-31 139.8 219 45.7
TWI56G0526 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 7.4e-31 138.3 217 44.7
Sabra05G0187200 Salix brachista HOM05D007731 ORTHO05D008483 1.3e-30 137.5 259 41.3
CSS0037397 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 1.7e-30 137.1 217 44.2
Nn6g32002 Nelumbo nucifera HOM05D007731 ORTHO05D008483 2.8e-30 136.3 235 42.1
CiPaw.08G067400 Carya illinoinensis HOM05D007731 ORTHO05D008483 1.4e-29 134.0 219 42.5
RcHm_v2.0_Chr6g0303181 Rosa chinensis HOM05D007731 ORTHO05D008483 2.4e-29 133.3 240 41.2
MSTRG.25262 Avicennia marina HOM05D007731 ORTHO05D008483 7.0e-29 131.7 257 40.9
FvH4_2g38210 Fragaria vesca HOM05D007731 ORTHO05D008483 1.5e-26 124.0 219 42.0
CSS0031900 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 1.9e-26 123.6 216 42.6
FAN20G0947 Fragaria x ananassa HOM05D007731 ORTHO05D008483 2.5e-26 123.2 251 41.0
Dinv39536 Davidia involucrata HOM05D007731 ORTHO05D008483 3.2e-26 122.9 164 50.6
FAN15G0282 Fragaria x ananassa HOM05D007731 ORTHO05D008483 2.1e-25 120.2 252 39.7
Actinidia15437 Actinidia chinensis HOM05D007731 ORTHO05D008483 6.1e-25 118.6 208 39.4
FAN27G0472 Fragaria x ananassa HOM05D007731 ORTHO05D008483 6.7e-24 115.2 252 38.9
Rhsim06G0016400 Rhododendron simsii HOM05D007731 ORTHO05D008483 1.5e-23 114.0 221 40.7
Rhsim06G0019700 Rhododendron simsii HOM05D007731 ORTHO05D008483 1.7e-22 110.5 232 39.7
VMungo1309G0548 Vigna mungo HOM05D007731 ORTHO05D008483 2.8e-22 109.8 220 41.4
Lsat_1_v5_gn_8_30081 Lactuca sativa HOM05D007731 ORTHO05D008483 3.7e-22 109.4 264 39.8
Gohir.D02G098500 Gossypium hirsutum HOM05D007731 ORTHO05D008483 4.8e-22 109.0 222 39.2
Sed0013309 Sechium edule HOM05D007731 ORTHO05D008483 1.8e-21 107.1 216 41.7
ClCG08G014190 Citrullus lanatus HOM05D007731 ORTHO05D008483 2.4e-21 106.7 208 40.9
Glyma.04G023500 Glycine max HOM05D007731 ORTHO05D008483 2.4e-21 106.7 239 38.9
Nn5g30769 Nelumbo nucifera HOM05D007731 ORTHO05D008483 7.0e-21 105.1 147 49.0
Eucgr.H00961 Eucalyptus grandis HOM05D007731 ORTHO05D008483 2.0e-20 103.6 272 34.6
CsaV3_2G024250 Cucumis sativus L. HOM05D007731 ORTHO05D008483 3.5e-20 102.8 204 40.7
PGSC0003DMG400009876 Solanum tuberosum HOM05D007731 ORTHO05D008483 4.5e-20 102.4 269 37.9
Gorai.005G112400 Gossypium raimondii HOM05D007731 ORTHO05D008483 7.7e-20 101.7 222 37.8
ECA233G0921 Erigeron canadensis HOM05D007731 ORTHO05D008483 1.3e-19 100.9 216 37.0
Phvul.009G009600 Phaseolus vulgaris HOM05D007731 ORTHO05D008483 1.3e-19 100.9 228 38.6
Psat0s2878g0040 Pisum sativum HOM05D007731 ORTHO05D008483 1.7e-19 100.5 217 39.2
TPR.G34549 Trifolium pratense HOM05D007731 ORTHO05D008483 2.2e-19 100.1 154 46.8
Lj1g0026139 Lotus japonicus HOM05D007731 ORTHO05D008483 3.8e-19 99.4 261 38.7
arahy.Tifrunner.gnm1.ann1.WY2XWP Arachis hypogaea HOM05D007731 ORTHO05D008483 8.5e-19 98.2 166 45.8
Lalb_Chr23g0266081 Lupinus albus HOM05D007731 ORTHO05D008483 8.5e-19 98.2 227 40.5
PGR031G1853 Punica granatum HOM05D007731 ORTHO05D008483 8.5e-19 98.2 162 40.7
arahy.Tifrunner.gnm1.ann1.3IU0NQ Arachis hypogaea HOM05D007731 ORTHO05D008483 1.9e-18 97.1 159 45.3
Gohir.A02G083100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 1.9e-18 97.1 228 36.0
Glyma.06G023400 Glycine max HOM05D007731 ORTHO05D008483 4.2e-18 95.9 229 36.7
SGA_v2.0_scaffold92G28205 Striga asiatica HOM05D007731 ORTHO05D008483 4.2e-18 95.9 232 39.2
Ca_15482_v3 Cicer arietinum L. HOM05D007731 ORTHO05D008483 5.5e-18 95.5 115 53.0
Medtr3g113660 Medicago truncatula HOM05D007731 ORTHO05D008483 5.5e-18 95.5 158 44.3
Aqoxy6G02285 Aquilegia oxysepala HOM05D007731 ORTHO05D008483 3.6e-17 92.8 255 34.1
A07p16020 Brassica napus HOM05D009961 ORTHO05D008483 5.2e-16 89.0 233 35.2
Migut.C00858 Erythranthe guttata HOM05D007731 ORTHO05D008483 6.8e-16 88.6 178 42.1
BraA07t29330Z Brassica rapa HOM05D009961 ORTHO05D008483 1.2e-15 87.8 233 35.2
BolC7t42871H Brassica oleracea HOM05D009961 ORTHO05D008483 9.8e-15 84.7 232 33.6
Dinv31866 Davidia involucrata HOM05D000068 ORTHO05D000084 1.3e-14 84.3 158 39.9
Sc15g0004830 Simmondsia chinensis HOM05D007731 ORTHO05D008483 6.3e-14 82.0 222 38.3
PSO541G3821 Papaver somniferum HOM05D007731 ORTHO05D008483 1.4e-13 80.9 233 33.9
CsaV3_3G045970 Cucumis sativus L. HOM05D007731 ORTHO05D008483 1.8e-13 80.5 196 38.8
Sopen04g035340 Solanum pennellii HOM05D007731 ORTHO05D008483 1.8e-13 80.5 120 45.0
BcaB07g32022 Brassica carinata HOM05D009961 ORTHO05D008483 7.0e-13 78.6 233 34.3
A06p16220 Brassica napus HOM05D009961 ORTHO05D008483 2.0e-12 77.0 233 34.3
BcaB03g14337 Brassica carinata HOM05D009961 ORTHO05D008483 7.7e-12 75.1 232 31.9
CARHR020550 Cardamine hirsuta HOM05D009961 ORTHO05D008483 7.7e-12 75.1 240 34.2
AT1G20070 Arabidopsis thaliana HOM05D009961 ORTHO05D008483 1.0e-11 74.7 231 32.9
BcaC05g25901 Brassica carinata HOM05D009961 ORTHO05D008483 2.2e-11 73.6 230 33.9
C05p18560 Brassica napus HOM05D009961 ORTHO05D008483 2.2e-11 73.6 230 33.9
BolC5t30567H Brassica oleracea HOM05D009961 ORTHO05D008483 2.2e-11 73.6 230 33.9
MELO3C003742.2 Cucumis melo HOM05D007731 ORTHO05D008483 2.9e-11 73.2 196 37.8
Carub.0001s1960 Capsella rubella HOM05D009961 ORTHO05D008483 8.5e-11 71.6 232 32.8
Lalb_Chr19g0131461 Lupinus albus HOM05D007731 ORTHO05D008483 5.5e-10 68.9 56 64.3
C07p23380 Brassica napus HOM05D009961 ORTHO05D008483 7.2e-10 68.6 216 31.9
THA.LOC104811421 Tarenaya hassleriana HOM05D009961 ORTHO05D008483 7.2e-10 68.6 227 33.0
AL1G32880 Arabidopsis lyrata HOM05D009961 ORTHO05D008483 1.2e-09 67.8 228 32.5
Sp1g17840 Schrenkiella parvula HOM05D009961 ORTHO05D008483 2.7e-09 66.6 232 32.3
Aa31LG7G4510 Aethionema arabicum HOM05D009961 ORTHO05D008483 4.7e-09 65.9 244 32.8
DCAR_013881 Daucus carota HOM05D007731 ORTHO05D008483 4.7e-09 65.9 198 32.3
ClCG05G015580 Citrullus lanatus HOM05D007731 ORTHO05D008483 6.1e-09 65.5 211 34.1
Phvul.001G005800 Phaseolus vulgaris HOM05D032462 ORTHO05D035917 1.0e-08 64.7 191 33.0
Thhalv10008606m.g Eutrema salsugineum HOM05D009961 ORTHO05D008483 2.3e-08 63.5 222 30.2
ATR0712G013 Amborella trichopoda HOM05D007731 ORTHO05D008483 8.8e-08 61.6 271 28.0
unitig_749.g13899 Utricularia gibba HOM05D007731 ORTHO05D008483 1.2e-07 61.2 176 34.7
C08p19900 Brassica napus HOM05D009961 ORTHO05D008483 3.4e-07 59.7 58 53.4
BolC8t49628H Brassica oleracea HOM05D009961 ORTHO05D008483 3.4e-07 59.7 58 53.4
VMungo0647G0644 Vigna mungo HOM05D032462 ORTHO05D035917 3.4e-07 59.7 162 34.0
Potri.008G198000 Populus trichocarpa HOM05D001921 ORTHO05D001784 4.4e-07 59.3 128 38.3
BraA06t24726Z Brassica rapa HOM05D009961 ORTHO05D008483 7.5e-07 58.5 228 30.3
Duzib151G0850 Durio zibethinus HOM05D001921 ORTHO05D001784 1.3e-06 57.8 81 46.9
arahy.Tifrunner.gnm1.ann1.288BMH Arachis hypogaea HOM05D001921 ORTHO05D001784 2.2e-06 57.0 82 43.9
arahy.Tifrunner.gnm1.ann1.XA6I97 Arachis hypogaea HOM05D001921 ORTHO05D001784 2.2e-06 57.0 82 43.9
CiPaw.02G088800 Carya illinoinensis HOM05D001921 ORTHO05D001784 3.7e-06 56.2 82 43.9
Gohir.A10G105100 Gossypium hirsutum HOM05D001921 ORTHO05D001784 3.7e-06 56.2 79 44.3
Gohir.D10G163601 Gossypium hirsutum HOM05D001921 ORTHO05D001784 3.7e-06 56.2 79 44.3
MBI18_g10965_MAGBIO Magnolia biondii HOM05D001921 ORTHO05D001784 3.7e-06 56.2 81 44.4
ATR0580G129 Amborella trichopoda HOM05D001921 ORTHO05D001784 4.9e-06 55.8 83 47.0
Migut.N03172 Erythranthe guttata HOM05D007731 ORTHO05D008483 4.9e-06 55.8 126 37.3
Atru.chr13.259 Acer truncatum HOM05D007731 ORTHO05D008483 6.3e-06 55.5 99 47.5
Gorai.011G182400 Gossypium raimondii HOM05D001921 ORTHO05D001784 6.3e-06 55.5 79 44.3


User provided reference genes

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