Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc26.149 Carica papaya HOM05D005712 ORTHO05D007865 1.2e-203 713.0 359 100.0
Duzib116G0237 Durio zibethinus HOM05D005712 ORTHO05D007865 2.2e-122 443.0 362 66.0
Thecc.08G064200 Theobroma cacao HOM05D005712 ORTHO05D007865 6.5e-122 441.4 359 66.0
Dinv31977 Davidia involucrata HOM05D005712 ORTHO05D007865 3.2e-121 439.1 360 65.3
COL.COLO4_07687 Corchorus olitorius HOM05D005712 ORTHO05D007865 5.5e-121 438.3 359 65.2
Manes.05G126100 Manihot esculenta HOM05D005712 ORTHO05D007865 2.6e-118 429.5 355 63.1
Ciclev10001686m.g Citrus clementina HOM05D005712 ORTHO05D007865 5.7e-118 428.3 358 62.6
Actinidia17068 Actinidia chinensis HOM05D005712 ORTHO05D007865 6.3e-117 424.9 357 63.3
Gohir.D05G181100 Gossypium hirsutum HOM05D005712 ORTHO05D007865 6.3e-117 424.9 362 64.1
Gohir.A05G177700 Gossypium hirsutum HOM05D005712 ORTHO05D007865 8.3e-117 424.5 359 63.2
QL02p015343 Quercus lobata HOM05D005712 ORTHO05D007865 8.3e-117 424.5 358 64.5
Potri.005G255300 Populus trichocarpa HOM05D005712 ORTHO05D007865 1.2e-115 420.6 379 61.2
TAR381G1666 Trochodendron aralioides HOM05D005712 ORTHO05D007865 2.7e-115 419.5 343 63.8
CSS0017080 Camellia sinensis var. sinensis HOM05D005712 ORTHO05D007865 5.0e-114 415.2 363 62.8
Nn5g31025 Nelumbo nucifera HOM05D005712 ORTHO05D007865 5.0e-114 415.2 356 62.4
GSVIVG01013413001 Vitis vinifera HOM05D005712 ORTHO05D007865 1.9e-113 413.3 357 62.7
Sabra05G0197900 Salix brachista HOM05D005712 ORTHO05D007865 3.2e-113 412.5 380 60.8
Cfa014126 Carpinus fangiana HOM05D005712 ORTHO05D007865 1.2e-112 410.6 361 62.9
CiPaw.07G134700 Carya illinoinensis HOM05D005712 ORTHO05D007865 2.7e-112 409.5 360 62.5
TAR625G0170 Trochodendron aralioides HOM05D005712 ORTHO05D007865 2.7e-112 409.5 342 61.1
Actinidia15518 Actinidia chinensis HOM05D005712 ORTHO05D007865 3.0e-111 406.0 359 60.4
Gorai.009G186100 Gossypium raimondii HOM05D005712 ORTHO05D007865 6.8e-111 404.8 317 67.2
Rhsim06G0004000 Rhododendron simsii HOM05D005712 ORTHO05D007865 6.8e-111 404.8 364 61.3
Atru.chr13.78 Acer truncatum HOM05D005712 ORTHO05D007865 4.8e-109 398.7 265 75.8
Potri.002G006300 Populus trichocarpa HOM05D005712 ORTHO05D007865 6.3e-109 398.3 380 57.9
Haze_22847 Corylus avellana HOM05D005712 ORTHO05D007865 5.4e-108 395.2 404 56.7
Carub.0001s2029 Capsella rubella HOM05D005712 ORTHO05D007865 2.7e-107 392.9 368 60.1
TWI56G0384 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 1.3e-106 390.6 358 60.3
THA.LOC104813742 Tarenaya hassleriana HOM05D005712 ORTHO05D007865 6.6e-106 388.3 362 60.8
TWI12G0719 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 3.3e-105 386.0 355 60.0
CARHR021260 Cardamine hirsuta HOM05D005712 ORTHO05D007865 5.5e-105 385.2 347 62.0
vmacro21777 Vaccinium macrocarpon HOM05D005712 ORTHO05D007865 1.4e-103 380.6 356 58.4
CsaV3_4G037540 Cucumis sativus L. HOM05D005712 ORTHO05D007865 4.0e-103 379.0 371 58.0
Sed0012463 Sechium edule HOM05D005712 ORTHO05D007865 8.9e-103 377.9 369 58.8
AT1G20830 Arabidopsis thaliana HOM05D005712 ORTHO05D007865 5.7e-102 375.2 369 58.5
BcaC05g25986 Brassica carinata HOM05D005712 ORTHO05D007865 5.7e-102 375.2 385 56.1
C05p19380 Brassica napus HOM05D005712 ORTHO05D007865 5.7e-102 375.2 385 56.1
MELO3C017048.2 Cucumis melo HOM05D005712 ORTHO05D007865 1.3e-101 374.0 364 57.4
Sp1g18530 Schrenkiella parvula HOM05D005712 ORTHO05D007865 2.2e-101 373.2 388 55.9
BcaB07g32078 Brassica carinata HOM05D005712 ORTHO05D007865 3.7e-101 372.5 386 55.2
Aa31LG7G4990 Aethionema arabicum HOM05D005712 ORTHO05D007865 8.3e-101 371.3 362 58.3
BolC5t30641H Brassica oleracea HOM05D005712 ORTHO05D007865 1.4e-100 370.5 386 56.0
Thhalv10007995m.g Eutrema salsugineum HOM05D005712 ORTHO05D007865 1.4e-100 370.5 383 55.6
BraA06t24791Z Brassica rapa HOM05D005712 ORTHO05D007865 3.1e-100 369.4 356 57.3
Hma1.2p1_0699F.1_g205630 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 7.0e-100 368.2 373 58.4
A06p16820 Brassica napus HOM05D005712 ORTHO05D007865 2.7e-99 366.3 356 57.3
MD06G1005200 Malus domestica HOM05D005712 ORTHO05D007865 2.7e-99 366.3 361 57.9
BcaB03g12849 Brassica carinata HOM05D005712 ORTHO05D007865 3.5e-99 365.9 353 57.8
Nitab4.5_0004637g0020 Nicotiana tabacum HOM05D005712 ORTHO05D007865 1.7e-98 363.6 364 56.3
RcHm_v2.0_Chr7g0216471 Rosa chinensis HOM05D005712 ORTHO05D007865 3.9e-98 362.5 359 56.8
ClCG11G018940 Citrullus lanatus HOM05D005712 ORTHO05D007865 8.6e-98 361.3 354 55.6
Lj4C5T14 Lonicera japonica HOM05D005712 ORTHO05D007865 8.6e-98 361.3 299 62.9
PGSC0003DMG400000968 Solanum tuberosum HOM05D005712 ORTHO05D007865 1.1e-97 360.9 271 66.4
Hund05083 Selenicereus undatus HOM05D005712 ORTHO05D007865 1.5e-97 360.5 337 57.9
MSTRG.22087 Avicennia marina HOM05D005712 ORTHO05D007865 2.5e-97 359.8 364 55.8
Nitab4.5_0000486g0150 Nicotiana tabacum HOM05D005712 ORTHO05D007865 4.3e-97 359.0 363 55.4
Eucgr.F03584 Eucalyptus grandis HOM05D005712 ORTHO05D007865 9.5e-97 357.8 363 56.2
Sopen08g012540 Solanum pennellii HOM05D005712 ORTHO05D007865 1.2e-96 357.5 271 66.1
Ah.00g001120 Amaranthus hybridus HOM05D005712 ORTHO05D007865 6.1e-96 355.1 263 67.3
Migut.N02981 Erythranthe guttata HOM05D005712 ORTHO05D007865 6.1e-96 355.1 358 56.7
Phvul.009G007500 Phaseolus vulgaris HOM05D005712 ORTHO05D007865 8.0e-96 354.8 331 57.7
CAN.G36.16 Capsicum annuum HOM05D005712 ORTHO05D007865 1.0e-95 354.4 271 65.3
EL10Ac1g01884 Beta vulgaris HOM05D005712 ORTHO05D007865 1.8e-95 353.6 375 54.1
Glyma.06G015100 Glycine max HOM05D005712 ORTHO05D007865 2.3e-95 353.2 247 69.2
MBI05_g08201_MAGBIO Magnolia biondii HOM05D005712 ORTHO05D007865 3.1e-95 352.8 306 61.1
Solyc08g042080.3 Solanum lycopersicum HOM05D005712 ORTHO05D007865 3.1e-95 352.8 271 65.3
CANSAT35G0891 Cannabis sativa HOM05D005712 ORTHO05D007865 5.2e-95 352.1 361 57.1
Cc10_g00320 Coffea canephora HOM05D005712 ORTHO05D007865 6.8e-95 351.7 276 66.3
Lj1g0001697 Lotus japonicus HOM05D005712 ORTHO05D007865 6.8e-95 351.7 360 56.1
Aqoxy6G01560 Aquilegia oxysepala HOM05D005712 ORTHO05D007865 8.9e-95 351.3 338 55.6
AUR62024105 Chenopodium quinoa HOM05D005712 ORTHO05D007865 1.5e-94 350.5 261 67.8
FAN13G2028 Fragaria x ananassa HOM05D005712 ORTHO05D007865 1.5e-94 350.5 339 58.4
PSO541G4707 Papaver somniferum HOM05D005712 ORTHO05D007865 1.5e-94 350.5 352 56.0
FAN18G0352 Fragaria x ananassa HOM05D005712 ORTHO05D007865 2.0e-94 350.1 339 58.4
Sc02g0009220 Simmondsia chinensis HOM05D005712 ORTHO05D007865 4.4e-94 349.0 227 74.0
FAN08G0897 Fragaria x ananassa HOM05D005712 ORTHO05D007865 7.5e-94 348.2 339 58.4
Prupe.5G006400 Prunus persica HOM05D005712 ORTHO05D007865 1.3e-93 347.4 293 63.1
ECA238G0561 Erigeron canadensis HOM05D005712 ORTHO05D007865 1.7e-93 347.1 341 56.3
arahy.Tifrunner.gnm1.ann1.CTTM8W Arachis hypogaea HOM05D005712 ORTHO05D007865 4.9e-93 345.5 363 55.6
VMungo1309G2122 Vigna mungo HOM05D005712 ORTHO05D007865 4.9e-93 345.5 229 73.4
Oeu004544.1 Olea europaea HOM05D005712 ORTHO05D007865 8.3e-93 344.7 398 51.8
PSO675G3648 Papaver somniferum HOM05D005712 ORTHO05D007865 3.2e-92 342.8 352 54.5
Lsat_1_v5_gn_2_2221 Lactuca sativa HOM05D005712 ORTHO05D007865 4.1e-92 342.4 335 56.7
FAN04G3045 Fragaria x ananassa HOM05D005712 ORTHO05D007865 5.4e-92 342.0 354 55.9
Glyma.04G015100 Glycine max HOM05D005712 ORTHO05D007865 2.0e-91 340.1 331 56.5
DCAR_022990 Daucus carota HOM05D000190 ORTHO05D007865 4.6e-91 339.0 363 52.3
Ca_15390_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 3.9e-90 335.9 259 65.3
FvH4_5g25940 Fragaria vesca HOM05D005712 ORTHO05D007865 5.0e-90 335.5 287 63.1
Lalb_Chr23g0265571 Lupinus albus HOM05D005712 ORTHO05D007865 5.0e-90 335.5 245 69.8
AL1G33850 Arabidopsis lyrata HOM05D005712 ORTHO05D007865 8.6e-90 334.7 221 75.6
Medtr3g116050 Medicago truncatula HOM05D005712 ORTHO05D007865 8.6e-90 334.7 270 63.3
SGA_v2.0_scaffold54G19632 Striga asiatica HOM05D005712 ORTHO05D007865 1.1e-89 334.3 343 56.0
SalBow6G6969 Salvia bowleyana HOM05D005712 ORTHO05D007865 4.3e-89 332.4 398 49.7
RcHm_v2.0_Chr4g0410601 Rosa chinensis HOM05D005712 ORTHO05D007865 2.1e-88 330.1 262 65.3
Peaxi162Scf00632g00416 Petunia axillaris HOM05D005712 ORTHO05D007865 4.7e-88 328.9 273 63.0
HanXRQChr06g0185301 Helianthus annuus HOM05D005712 ORTHO05D007865 1.2e-86 324.3 352 53.1
AUR62035160 Chenopodium quinoa HOM05D005712 ORTHO05D007865 5.8e-86 322.0 356 51.7
Ca_29628_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 1.3e-85 320.9 216 73.1
CDE04G2669 Ceratophyllum demersum HOM05D005712 ORTHO05D007865 1.7e-85 320.5 273 61.5
TPR.G38133 Trifolium pratense HOM05D005712 ORTHO05D007865 1.4e-84 317.4 251 62.5
Hma1.2p1_0699F.1_g205640 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 1.6e-83 313.9 188 81.9
arahy.Tifrunner.gnm1.ann1.16JRKN Arachis hypogaea HOM05D005712 ORTHO05D007865 7.8e-83 311.6 215 72.6
ATR0807G100 Amborella trichopoda HOM05D005712 ORTHO05D007865 1.0e-82 311.2 298 56.7
Psat5g008680 Pisum sativum HOM05D005712 ORTHO05D007865 4.9e-77 292.4 186 74.7
unitig_22.g5745 Utricularia gibba HOM05D005712 ORTHO05D007865 2.4e-76 290.0 234 67.9
HPP92_022548 Vanilla planifolia HOM05D005712 ORTHO05D007865 3.0e-74 283.1 264 57.6
Cpa.g.sc26.148 Carica papaya HOM05D005712 ORTHO05D007865 1.5e-70 270.8 153 89.5
Os04g0584900 Oryza sativa ssp. japonica HOM05D005712 ORTHO05D007865 1.7e-66 257.3 271 47.6
Zm00001eb072780 Zea mays HOM05D005712 ORTHO05D007865 1.7e-66 257.3 264 50.8
Zm00001eb428100 Zea mays HOM05D005712 ORTHO05D007865 1.3e-64 251.1 273 46.9
SEGI_27803 Sequoiadendron giganteum HOM05D005712 ORTHO05D007865 2.8e-64 250.0 184 63.0
Mapoly0022s0159 Marchantia polymorpha HOM05D005712 ORTHO05D007865 6.2e-56 222.2 195 54.9
Oeu019899.1 Olea europaea HOM05D005712 ORTHO05D007865 1.7e-53 214.2 121 82.6
AagrBONN_evm.TU.Sc2ySwM_117.1031 Anthoceros agrestis HOM05D005712 ORTHO05D007865 6.4e-53 212.2 236 48.3
SMO276G0054 Selaginella moellendorffii HOM05D005712 ORTHO05D007865 1.1e-52 211.5 177 58.2
Pp3c15_5620 Physcomitrium patens HOM05D005712 ORTHO05D007865 1.0e-50 204.9 250 43.2
Pp3c9_6030 Physcomitrium patens HOM05D005712 ORTHO05D007865 1.3e-50 204.5 200 52.0
Duzib093G1432 Durio zibethinus HOM05D005712 ORTHO05D007865 6.7e-50 202.2 103 92.2
Cpa.g.c30366.3 Carica papaya HOM05D005712 ORTHO05D007865 1.1e-33 148.3 79 87.3
Cpa.g.c44851 Carica papaya HOM05D005712 ORTHO05D007865 7.4e-33 145.6 69 98.6
Cpa.g.c35203 Carica papaya HOM05D005712 ORTHO05D007865 2.9e-29 133.7 68 100.0
Oeu019902.1 Olea europaea HOM05D005712 ORTHO05D007865 9.1e-23 112.1 189 43.4
Cpa.g.c30633.1 Carica papaya HOM05D005712 ORTHO05D120172 5.1e-18 96.3 140 46.4
A07p15460 Brassica napus HOM05D005712 ORTHO05D007865 1.8e-15 87.8 61 67.2
BolC8t49668H Brassica oleracea HOM05D005712 ORTHO05D032168 2.9e-13 80.5 135 37.0
BcaC07g39055 Brassica carinata HOM05D005712 ORTHO05D032168 5.2e-10 69.7 152 32.9
C08p20390 Brassica napus HOM05D005712 ORTHO05D032168 5.7e-09 66.2 161 31.1
TAR188G0003 Trochodendron aralioides HOM05D005712 ORTHO05D007865 8.2e-08 62.4 110 37.3
BcaB03g14422 Brassica carinata HOM05D005712 ORTHO05D014368 2.4e-07 60.8 43 62.8
HPP92_022533 Vanilla planifolia HOM05D004721 ORTHO05D005765 2.6e-06 57.4 73 41.1


User provided reference genes

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